RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 Q5VSD8 79 aa12.13□□□□□ -0.47
NEK9-204ENST00000554258 TCF24Q7RTU0 167 aa12.13□□□□□ -0.47
NEK9-204ENST00000554258 PPP1R14BQ96C90 147 aa12.13□□□□□ -0.47
NEK9-204ENST00000554258 C17orf77Q96MU5 243 aa12.13□□□□□ -0.47
NEK9-204ENST00000554258 GPR82Q96P67 336 aa12.13□□□□□ -0.47
NEK9-204ENST00000554258 SEPSECSQ9HD40 501 aaKnown RBP12.13□□□□□ -0.47
NEK9-204ENST00000554258 TRAV2A0A0B4J234 112 aa12.12□□□□□ -0.47
NEK9-204ENST00000554258 HELTA6NFD8 242 aa12.12□□□□□ -0.47
NEK9-204ENST00000554258 BOLA2-SMG1P6H3BVE0 249 aa12.12□□□□□ -0.47
NEK9-204ENST00000554258 OR8I2Q8N0Y5 310 aa12.12□□□□□ -0.47
NEK9-204ENST00000554258 Q8NAQ8 132 aa12.12□□□□□ -0.47
NEK9-204ENST00000554258 FAM167A-AS1Q96KT0 104 aa12.12□□□□□ -0.47
NEK9-204ENST00000554258 MRPL32Q9BYC8 188 aaKnown RBP12.12□□□□□ -0.47
NEK9-204ENST00000554258 RPRMQ9NS64 109 aa12.12□□□□□ -0.47
NEK9-204ENST00000554258 FUT9Q9Y231 359 aa12.12□□□□□ -0.47
NEK9-204ENST00000554258 TRAV5A0A0B4J249 113 aa12.11□□□□□ -0.47
NEK9-204ENST00000554258 RPL7P18124 248 aaKnown RBP12.11□□□□□ -0.47
NEK9-204ENST00000554258 RAB2AP61019 212 aa12.11□□□□□ -0.47
NEK9-204ENST00000554258 FAM78BQ5VT40 261 aa12.11□□□□□ -0.47
NEK9-204ENST00000554258 SPATA31B1PQ5VZV4 182 aa12.11□□□□□ -0.47
NEK9-204ENST00000554258 LEMD1Q68G75 181 aa12.11□□□□□ -0.47
NEK9-204ENST00000554258 SIGLEC15Q6ZMC9 328 aa12.11□□□□□ -0.47
NEK9-204ENST00000554258 APRG1Q8IVJ8 170 aa12.11□□□□□ -0.47
NEK9-204ENST00000554258 BOLA1Q9Y3E2 137 aa12.11□□□□□ -0.47
NEK9-204ENST00000554258 CA1P00915 261 aaPredicted RBP12.1□□□□□ -0.47
NEK9-204ENST00000554258 RHOBP62745 196 aa12.1□□□□□ -0.47
NEK9-204ENST00000554258 TMEM41BQ5BJD5 291 aa12.1□□□□□ -0.47
NEK9-204ENST00000554258 MIR17HGQ75NE6 70 aa12.1□□□□□ -0.47
NEK9-204ENST00000554258 OR10G4Q8NGN3 311 aa12.1□□□□□ -0.47
NEK9-204ENST00000554258 OR10G9Q8NGN4 311 aa12.1□□□□□ -0.47
NEK9-204ENST00000554258 OR10G7Q8NGN6 311 aa12.1□□□□□ -0.47
NEK9-204ENST00000554258 FRZBQ92765 325 aa12.1□□□□□ -0.47
NEK9-204ENST00000554258 SLC25A22Q9H936 323 aa12.1□□□□□ -0.47
NEK9-204ENST00000554258 TMEM14CQ9P0S9 112 aa12.1□□□□□ -0.47
NEK9-204ENST00000554258 A0A087X0K7 114 aa12.09□□□□□ -0.47
NEK9-204ENST00000554258 IGHV4-28A0A0C4DH34 117 aa12.09□□□□□ -0.47
NEK9-204ENST00000554258 GALR1P47211 349 aa12.09□□□□□ -0.47
NEK9-204ENST00000554258 BPIFA4PQ86YQ2 179 aa12.09□□□□□ -0.47
NEK9-204ENST00000554258 DCANP1Q8TF63 244 aa12.09□□□□□ -0.47
NEK9-204ENST00000554258 SLC25A2Q9BXI2 301 aa12.09□□□□□ -0.47
NEK9-204ENST00000554258 MS4A6AQ9H2W1 248 aa12.09□□□□□ -0.47
NEK9-204ENST00000554258 OR4C46A6NHA9 309 aa12.08□□□□□ -0.48
NEK9-204ENST00000554258 UMAD1C9J7I0 102 aa12.08□□□□□ -0.48
NEK9-204ENST00000554258 K7EQG2 157 aa12.08□□□□□ -0.48
NEK9-204ENST00000554258 ZNF124Q15973 351 aa12.08□□□□□ -0.48
NEK9-204ENST00000554258 EIF5AL1Q6IS14 154 aaKnown RBP12.08□□□□□ -0.48
NEK9-204ENST00000554258 NRN1Q9NPD7 142 aa12.08□□□□□ -0.48
NEK9-204ENST00000554258 SOCS3O14543 225 aa12.07□□□□□ -0.48
NEK9-204ENST00000554258 IGLC2P0DOY2 106 aa12.07□□□□□ -0.48
NEK9-204ENST00000554258 PAFAH1B2P68402 229 aa12.07□□□□□ -0.48
NEK9-204ENST00000554258 AKR1C8PQ5T2L2 129 aa12.07□□□□□ -0.48
NEK9-204ENST00000554258 FAM122CQ6P4D5 195 aa12.07□□□□□ -0.48
NEK9-204ENST00000554258 ZNF767PQ75MW2 155 aa12.07□□□□□ -0.48
NEK9-204ENST00000554258 STXBP6Q8NFX7 210 aa12.07□□□□□ -0.48
NEK9-204ENST00000554258 TMED6Q8WW62 240 aa12.07□□□□□ -0.48
NEK9-204ENST00000554258 ZNF503Q96F45 646 aa12.07□□□□□ -0.48
NEK9-204ENST00000554258 PHYHIPLQ96FC7 376 aa12.07□□□□□ -0.48
NEK9-204ENST00000554258 A0A1W2PPV4 95 aa12.06□□□□□ -0.48
NEK9-204ENST00000554258 STAG3L2P0CL84 134 aa12.06□□□□□ -0.48
NEK9-204ENST00000554258 STAG3L3P0CL85 134 aa12.06□□□□□ -0.48
NEK9-204ENST00000554258 HIST1H1EP10412 219 aaKnown RBP12.06□□□□□ -0.48
NEK9-204ENST00000554258 CDC34P49427 236 aaPredicted RBP12.06□□□□□ -0.48
NEK9-204ENST00000554258 MEOX2P50222 304 aa12.06□□□□□ -0.48
NEK9-204ENST00000554258 RPL11P62913 178 aaKnown RBP12.06□□□□□ -0.48
NEK9-204ENST00000554258 ZNF726P1Q15940 193 aa12.06□□□□□ -0.48
NEK9-204ENST00000554258 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.06□□□□□ -0.48
NEK9-204ENST00000554258 DPPA3Q6W0C5 159 aa12.06□□□□□ -0.48
NEK9-204ENST00000554258 SYT8Q8NBV8 401 aa12.06□□□□□ -0.48
NEK9-204ENST00000554258 RAB24Q969Q5 203 aa12.06□□□□□ -0.48
NEK9-204ENST00000554258 ACTR3CQ9C0K3 210 aaPredicted RBP12.06□□□□□ -0.48
NEK9-204ENST00000554258 H3BQ15 152 aa12.05□□□□□ -0.48
NEK9-204ENST00000554258 TAS2R45P59539 299 aa12.05□□□□□ -0.48
NEK9-204ENST00000554258 RNF212Q495C1 297 aa12.05□□□□□ -0.48
NEK9-204ENST00000554258 SERTAD4-AS1Q5TG53 156 aa12.05□□□□□ -0.48
NEK9-204ENST00000554258 SAMD13Q5VXD3 122 aa12.05□□□□□ -0.48
NEK9-204ENST00000554258 PQLC2Q6ZP29 291 aa12.05□□□□□ -0.48
NEK9-204ENST00000554258 C6orf223Q8N319 242 aa12.05□□□□□ -0.48
NEK9-204ENST00000554258 GBGT1Q8N5D6 347 aa12.05□□□□□ -0.48
NEK9-204ENST00000554258 SUN5Q8TC36 379 aa12.05□□□□□ -0.48
NEK9-204ENST00000554258 SAT2Q96F10 170 aaPredicted RBP12.05□□□□□ -0.48
NEK9-204ENST00000554258 OR51M1Q9H341 326 aa12.05□□□□□ -0.48
NEK9-204ENST00000554258 IGKV3-7A0A075B6H7 116 aa12.04□□□□□ -0.48
NEK9-204ENST00000554258 CTXND1A0A1B0GTU2 59 aa12.04□□□□□ -0.48
NEK9-204ENST00000554258 DNASE2O00115 360 aaPredicted RBP12.04□□□□□ -0.48
NEK9-204ENST00000554258 MIFP14174 115 aa12.04□□□□□ -0.48
NEK9-204ENST00000554258 SULT1A2P50226 295 aa12.04□□□□□ -0.48
NEK9-204ENST00000554258 RAB5CP51148 216 aa12.04□□□□□ -0.48
NEK9-204ENST00000554258 CMC4P56277 68 aaPredicted RBP12.04□□□□□ -0.48
NEK9-204ENST00000554258 GUK1Q16774 197 aa12.04□□□□□ -0.48
NEK9-204ENST00000554258 KHDC3LQ587J8 217 aa12.04□□□□□ -0.48
NEK9-204ENST00000554258 SSX7Q7RTT5 188 aa12.04□□□□□ -0.48
NEK9-204ENST00000554258 LYPD1Q8N2G4 141 aa12.04□□□□□ -0.48
NEK9-204ENST00000554258 MBD3L1Q8WWY6 194 aa12.04□□□□□ -0.48
NEK9-204ENST00000554258 FXYD5Q96DB9 178 aa12.04□□□□□ -0.48
NEK9-204ENST00000554258 PAXXQ9BUH6 204 aa12.04□□□□□ -0.48
NEK9-204ENST00000554258 ZNF586Q9NXT0 402 aa12.04□□□□□ -0.48
NEK9-204ENST00000554258 ZNF253O75346 499 aa12.03□□□□□ -0.48
NEK9-204ENST00000554258 EIF3GO75821 320 aaKnown RBP eCLIP12.03□□□□□ -0.48
NEK9-204ENST00000554258 PYYP10082 97 aa12.03□□□□□ -0.48
NEK9-204ENST00000554258 C12orf74Q32Q52 190 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms