RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 C7orf50Q9BRJ6 194 aaKnown RBP2.07□□□□□ -2.08
SLIRP-202ENST00000553981 RSG1Q9BU20 258 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 PBDC1Q9BVG4 233 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 NAA50Q9GZZ1 169 aaKnown RBP2.07□□□□□ -2.08
SLIRP-202ENST00000553981 MAGT1Q9H0U3 335 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 MIXL1Q9H2W2 232 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 RBKSQ9H477 322 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 IFT46Q9NQC8 304 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 DOK5Q9P104 306 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 TP53TG3Q9ULZ0 132 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 GPR132Q9UNW8 380 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 GOLT1BQ9Y3E0 138 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 TRAV30A0A087WSZ9 112 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 TEX13DA0A0J9YY54 714 aaPredicted RBP2.06□□□□□ -2.08
SLIRP-202ENST00000553981 LOC100131303A0A0U1RQF7 123 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 A0A1W2PPQ1 181 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 H3BRN7 92 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 BOLA2-SMG1P6H3BVE0 249 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 CORTO00230 105 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 ISLRO14498 428 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 PITX3O75364 302 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 SCGNO76038 276 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 NXPH4O95158 308 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 CT45A10P0DMU9 189 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 PGAM2P15259 253 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 CXCL3P19876 107 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 PRSS3P35030 304 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 AKR1C2P52895 323 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 AP2S1P53680 142 aaPredicted RBP2.06□□□□□ -2.08
SLIRP-202ENST00000553981 GABARAPL2P60520 117 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 NUTF2P61970 127 aaKnown RBP2.06□□□□□ -2.08
SLIRP-202ENST00000553981 NEDD8Q15843 81 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 UBE2NLQ5JXB2 153 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 LPCAT3Q6P1A2 487 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 LYPD5Q6UWN5 251 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 TMED4Q7Z7H5 227 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 CMTM1Q8IZ96 169 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 TSPAN14Q8NG11 270 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 OR8A1Q8NGG7 326 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 RNASEH2CQ8TDP1 164 aaKnown RBP2.06□□□□□ -2.08
SLIRP-202ENST00000553981 ZNF431Q8TF32 576 aaPredicted RBP2.06□□□□□ -2.08
SLIRP-202ENST00000553981 GNPNAT1Q96EK6 184 aaPredicted RBP2.06□□□□□ -2.08
SLIRP-202ENST00000553981 ZNF486Q96H40 463 aaPredicted RBP2.06□□□□□ -2.08
SLIRP-202ENST00000553981 LINC01587Q99440 93 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 TMEM222Q9H0R3 208 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 SLC25A22Q9H936 323 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 DIABLOQ9NR28 239 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 PPP1R14DQ9NXH3 145 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 COMMD3Q9UBI1 195 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 SSR3Q9UNL2 185 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 KLF12Q9Y4X4 402 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 TMEM56-RWDD3S4R434 201 aa2.06□□□□□ -2.08
SLIRP-202ENST00000553981 TEX48A0A1B0GUV7 120 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 CRYM-AS1A6NIL9 109 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 H3BQ15 152 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 SIVA1O15304 175 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 PAGE4O60829 102 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 PRAF2O60831 178 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 ZNF324O75467 553 aaPredicted RBP2.05□□□□□ -2.08
SLIRP-202ENST00000553981 IGHV3-53P01767 116 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 IAPPP10997 89 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 SLC25A4P12235 298 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 M6PRP20645 277 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 SUB1P53999 127 aaKnown RBP eCLIP2.05□□□□□ -2.08
SLIRP-202ENST00000553981 TAS2R46P59540 309 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 TAS2R60P59551 318 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 VBP1P61758 197 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 TSPAN5P62079 268 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 HIST1H1AQ02539 215 aaPredicted RBP2.05□□□□□ -2.08
SLIRP-202ENST00000553981 CD300CQ08708 224 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 ERCC8Q13216 396 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 CLINT1Q14677 625 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 PSG3Q16557 428 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 TRIM16LQ309B1 348 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 GGNBP1Q5YKI7 109 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 OR8G2PQ6IF36 304 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 OR4C16Q8NGL9 310 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 COQ8AQ8NI60 647 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 TMEM263Q8WUH6 116 aaKnown RBP2.05□□□□□ -2.08
SLIRP-202ENST00000553981 SAT2Q96F10 170 aaPredicted RBP2.05□□□□□ -2.08
SLIRP-202ENST00000553981 S100A16Q96FQ6 103 aaKnown RBP2.05□□□□□ -2.08
SLIRP-202ENST00000553981 C16orf74Q96GX8 76 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 FAM19A4Q96LR4 140 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 TRGV9Q99603 122 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 NAA60Q9H7X0 242 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 GSN-AS1Q9NRJ2 163 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 RPRMQ9NS64 109 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.05□□□□□ -2.08
SLIRP-202ENST00000553981 MTFP1Q9UDX5 166 aa2.05□□□□□ -2.08
SLIRP-202ENST00000553981 TIMM8BQ9Y5J9 83 aaPredicted RBP2.05□□□□□ -2.08
SLIRP-202ENST00000553981 DMBT1Q9UGM3 2413 aaPredicted RBP2.05□□□□□ -2.08
SLIRP-202ENST00000553981 A0A087X0K7 114 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 TRAV5A0A0B4J249 113 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 TRAV12-3A0A0B4J271 114 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 ZFP92A6NM28 416 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 CEBPZOSA8MTT3 80 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 USP17L23D6RBM5 183 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 PANO1I0J062 215 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 M0R3E3 92 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 CTDSP2O14595 271 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 966.1 ms