RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 MIC13Q5XKP0 118 aa7.99□□□□□ -1.13
PRPF40B-212ENST00000551111 LCN15Q6UWW0 184 aa7.99□□□□□ -1.13
PRPF40B-212ENST00000551111 ZNF493Q6ZR52 646 aa7.99□□□□□ -1.13
PRPF40B-212ENST00000551111 SPATA12Q7Z6I5 190 aa7.99□□□□□ -1.13
PRPF40B-212ENST00000551111 MAPKAPK5-AS1Q8N8E1 139 aa7.99□□□□□ -1.13
PRPF40B-212ENST00000551111 MGAT4CQ9UBM8 478 aa7.99□□□□□ -1.13
PRPF40B-212ENST00000551111 COX7A2P2O60397 106 aa7.98□□□□□ -1.13
PRPF40B-212ENST00000551111 FUSP35637 526 aaKnown RBP eCLIP7.98□□□□□ -1.13
PRPF40B-212ENST00000551111 SPANXN2Q5MJ10 180 aa7.98□□□□□ -1.13
PRPF40B-212ENST00000551111 Q6ZQT7 251 aa7.98□□□□□ -1.13
PRPF40B-212ENST00000551111 Q6ZTI0 123 aa7.98□□□□□ -1.13
PRPF40B-212ENST00000551111 BPIFA4PQ86YQ2 179 aa7.98□□□□□ -1.13
PRPF40B-212ENST00000551111 RXFP4Q8TDU9 374 aa7.98□□□□□ -1.13
PRPF40B-212ENST00000551111 ZNF431Q8TF32 576 aaPredicted RBP7.98□□□□□ -1.13
PRPF40B-212ENST00000551111 MITD1Q8WV92 249 aa7.98□□□□□ -1.13
PRPF40B-212ENST00000551111 GNPNAT1Q96EK6 184 aaPredicted RBP7.98□□□□□ -1.13
PRPF40B-212ENST00000551111 SLC50A1Q9BRV3 221 aa7.98□□□□□ -1.13
PRPF40B-212ENST00000551111 TMPRSS5Q9H3S3 457 aa7.98□□□□□ -1.13
PRPF40B-212ENST00000551111 C11orf1Q9H5F2 150 aa7.98□□□□□ -1.13
PRPF40B-212ENST00000551111 ZNF586Q9NXT0 402 aa7.98□□□□□ -1.13
PRPF40B-212ENST00000551111 NAP1L6A6NFF2 107 aa7.97□□□□□ -1.13
PRPF40B-212ENST00000551111 FAM24AA6NFZ4 105 aa7.97□□□□□ -1.13
PRPF40B-212ENST00000551111 M0R3E3 92 aa7.97□□□□□ -1.13
PRPF40B-212ENST00000551111 PLA2G10O15496 165 aa7.97□□□□□ -1.13
PRPF40B-212ENST00000551111 CST7O76096 145 aa7.97□□□□□ -1.13
PRPF40B-212ENST00000551111 CXCL2P19875 107 aa7.97□□□□□ -1.13
PRPF40B-212ENST00000551111 TAS2R30P59541 319 aa7.97□□□□□ -1.13
PRPF40B-212ENST00000551111 ERCC8Q13216 396 aa7.97□□□□□ -1.13
PRPF40B-212ENST00000551111 C10orf113Q5VZT2 155 aa7.97□□□□□ -1.13
PRPF40B-212ENST00000551111 TRIQKQ629K1 86 aa7.97□□□□□ -1.13
PRPF40B-212ENST00000551111 NRARPQ7Z6K4 114 aa7.97□□□□□ -1.13
PRPF40B-212ENST00000551111 ZNF546Q86UE3 836 aa7.97□□□□□ -1.13
PRPF40B-212ENST00000551111 VSIG2Q96IQ7 327 aa7.97□□□□□ -1.13
PRPF40B-212ENST00000551111 LSM5Q9Y4Y9 91 aaKnown RBP7.97□□□□□ -1.13
PRPF40B-212ENST00000551111 M6PRP20645 277 aa7.96□□□□□ -1.14
PRPF40B-212ENST00000551111 CAMLGP49069 296 aa7.96□□□□□ -1.14
PRPF40B-212ENST00000551111 INPP1P49441 399 aa7.96□□□□□ -1.14
PRPF40B-212ENST00000551111 CD300CQ08708 224 aa7.96□□□□□ -1.14
PRPF40B-212ENST00000551111 PXDC1Q5TGL8 231 aa7.96□□□□□ -1.14
PRPF40B-212ENST00000551111 OR10J6PQ8NGY7 276 aa7.96□□□□□ -1.14
PRPF40B-212ENST00000551111 C20orf144Q9BQM9 153 aa7.96□□□□□ -1.14
PRPF40B-212ENST00000551111 Q9H3A6 140 aa7.96□□□□□ -1.14
PRPF40B-212ENST00000551111 DNAJC4Q9NNZ3 241 aa7.96□□□□□ -1.14
PRPF40B-212ENST00000551111 GSN-AS1Q9NRJ2 163 aa7.96□□□□□ -1.14
PRPF40B-212ENST00000551111 FAT1Q14517 4588 aa7.96□□□□□ -1.14
PRPF40B-212ENST00000551111 A0A096LPF7 62 aa7.95□□□□□ -1.14
PRPF40B-212ENST00000551111 NPIPB6E9PJ23 425 aa7.95□□□□□ -1.14
PRPF40B-212ENST00000551111 NDUFB4O95168 129 aa7.95□□□□□ -1.14
PRPF40B-212ENST00000551111 IL7P13232 177 aa7.95□□□□□ -1.14
PRPF40B-212ENST00000551111 C11orf72Q8NBR9 251 aa7.95□□□□□ -1.14
PRPF40B-212ENST00000551111 SEC22CQ9BRL7 303 aa7.95□□□□□ -1.14
PRPF40B-212ENST00000551111 GGACTQ9BVM4 153 aa7.95□□□□□ -1.14
PRPF40B-212ENST00000551111 TNFRSF18Q9Y5U5 241 aa7.95□□□□□ -1.14
PRPF40B-212ENST00000551111 TRAV6A0A075B6T7 132 aa7.94□□□□□ -1.14
PRPF40B-212ENST00000551111 IGSF23A1L1A6 192 aa7.94□□□□□ -1.14
PRPF40B-212ENST00000551111 FAM25EA8MYX2 175 aa7.94□□□□□ -1.14
PRPF40B-212ENST00000551111 SNURFLB1AK76 121 aa7.94□□□□□ -1.14
PRPF40B-212ENST00000551111 ZNF324O75467 553 aaPredicted RBP7.94□□□□□ -1.14
PRPF40B-212ENST00000551111 RLN2P04090 185 aa7.94□□□□□ -1.14
PRPF40B-212ENST00000551111 PYYP10082 97 aa7.94□□□□□ -1.14
PRPF40B-212ENST00000551111 BTN1A1Q13410 526 aa7.94□□□□□ -1.14
PRPF40B-212ENST00000551111 GCSAMLQ5JQS6 135 aa7.94□□□□□ -1.14
PRPF40B-212ENST00000551111 PRR9Q5T870 116 aa7.94□□□□□ -1.14
PRPF40B-212ENST00000551111 CCDC28AQ8IWP9 274 aa7.94□□□□□ -1.14
PRPF40B-212ENST00000551111 Q8N1X5 172 aa7.94□□□□□ -1.14
PRPF40B-212ENST00000551111 UPK3BQ9BT76 320 aa7.94□□□□□ -1.14
PRPF40B-212ENST00000551111 AGPAT4-IT1Q9H0P7 198 aa7.94□□□□□ -1.14
PRPF40B-212ENST00000551111 C20orf85Q9H1P6 137 aa7.94□□□□□ -1.14
PRPF40B-212ENST00000551111 SCRT2Q9NQ03 307 aa7.94□□□□□ -1.14
PRPF40B-212ENST00000551111 WDR83OSQ9Y284 106 aa7.94□□□□□ -1.14
PRPF40B-212ENST00000551111 MRPS16Q9Y3D3 137 aaKnown RBP7.94□□□□□ -1.14
PRPF40B-212ENST00000551111 KLF12Q9Y4X4 402 aa7.94□□□□□ -1.14
PRPF40B-212ENST00000551111 PXMP4Q9Y6I8 212 aa7.94□□□□□ -1.14
PRPF40B-212ENST00000551111 BCAP31P51572 246 aa7.93□□□□□ -1.14
PRPF40B-212ENST00000551111 CAV2P51636 162 aa7.93□□□□□ -1.14
PRPF40B-212ENST00000551111 DAZ2Q13117 558 aaKnown RBP7.93□□□□□ -1.14
PRPF40B-212ENST00000551111 Q6ZRN7 208 aaPredicted RBP7.93□□□□□ -1.14
PRPF40B-212ENST00000551111 S100A7AQ86SG5 101 aa7.93□□□□□ -1.14
PRPF40B-212ENST00000551111 EXOC3-AS1Q8N2X6 119 aa7.93□□□□□ -1.14
PRPF40B-212ENST00000551111 ZNF503Q96F45 646 aa7.93□□□□□ -1.14
PRPF40B-212ENST00000551111 FAM19A4Q96LR4 140 aa7.93□□□□□ -1.14
PRPF40B-212ENST00000551111 TP53TG3Q9ULZ0 132 aa7.93□□□□□ -1.14
PRPF40B-212ENST00000551111 TRBV19A0A075B6N1 114 aa7.92□□□□□ -1.14
PRPF40B-212ENST00000551111 UBE2L5PA0A1B0GUS4 154 aa7.92□□□□□ -1.14
PRPF40B-212ENST00000551111 C7orf71A4D174 169 aa7.92□□□□□ -1.14
PRPF40B-212ENST00000551111 KLLNB2CW77 178 aa7.92□□□□□ -1.14
PRPF40B-212ENST00000551111 L7N2F9 121 aa7.92□□□□□ -1.14
PRPF40B-212ENST00000551111 LEPP41159 167 aa7.92□□□□□ -1.14
PRPF40B-212ENST00000551111 LINC00315P59091 139 aa7.92□□□□□ -1.14
PRPF40B-212ENST00000551111 VAMP2P63027 116 aa7.92□□□□□ -1.14
PRPF40B-212ENST00000551111 IL15RAQ13261 267 aa7.92□□□□□ -1.14
PRPF40B-212ENST00000551111 VWC2Q2TAL6 325 aa7.92□□□□□ -1.14
PRPF40B-212ENST00000551111 ODF3Q96PU9 254 aa7.92□□□□□ -1.14
PRPF40B-212ENST00000551111 PYGO2Q9BRQ0 406 aa7.92□□□□□ -1.14
PRPF40B-212ENST00000551111 SLC39A9Q9NUM3 307 aa7.92□□□□□ -1.14
PRPF40B-212ENST00000551111 UQCC1Q9NVA1 299 aa7.92□□□□□ -1.14
PRPF40B-212ENST00000551111 HERC1Q15751 4861 aa7.92□□□□□ -1.14
PRPF40B-212ENST00000551111 IGKV2-40A0A087WW87 121 aaPredicted RBP7.91□□□□□ -1.14
PRPF40B-212ENST00000551111 TRGV1A0A0A0MS02 117 aa7.91□□□□□ -1.14
PRPF40B-212ENST00000551111 C5orf51A6NDU8 294 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms