RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 IGKV2-40A0A087WW87 121 aaPredicted RBP11.04□□□□□ -0.64
CALCOCO1-218ENST00000550804 IGHV3-66A0A0C4DH42 116 aa11.04□□□□□ -0.64
CALCOCO1-218ENST00000550804 GOSR1O95249 250 aa11.04□□□□□ -0.64
CALCOCO1-218ENST00000550804 IGKV2D-40P01614 121 aaPredicted RBP11.04□□□□□ -0.64
CALCOCO1-218ENST00000550804 CLEC3BP05452 202 aa11.04□□□□□ -0.64
CALCOCO1-218ENST00000550804 UBE2E1P51965 193 aa11.04□□□□□ -0.64
CALCOCO1-218ENST00000550804 C15orf32Q32M92 178 aa11.04□□□□□ -0.64
CALCOCO1-218ENST00000550804 TMEM75Q8N9X5 138 aa11.04□□□□□ -0.64
CALCOCO1-218ENST00000550804 BORCS7Q96B45 105 aa11.04□□□□□ -0.64
CALCOCO1-218ENST00000550804 C20orf144Q9BQM9 153 aa11.04□□□□□ -0.64
CALCOCO1-218ENST00000550804 MIEN1Q9BRT3 115 aa11.04□□□□□ -0.64
CALCOCO1-218ENST00000550804 IGHV3OR16-13A0A075B7E8 117 aa11.03□□□□□ -0.64
CALCOCO1-218ENST00000550804 IGHV3-74A0A0B4J1X5 117 aa11.03□□□□□ -0.64
CALCOCO1-218ENST00000550804 ATP6V0E1O15342 81 aa11.03□□□□□ -0.64
CALCOCO1-218ENST00000550804 GPR183P32249 361 aa11.03□□□□□ -0.64
CALCOCO1-218ENST00000550804 C16orf54Q6UWD8 224 aa11.03□□□□□ -0.64
CALCOCO1-218ENST00000550804 UNQ5815/PRO19632Q6UWF5 114 aa11.03□□□□□ -0.64
CALCOCO1-218ENST00000550804 LINC00173Q6ZV60 143 aa11.03□□□□□ -0.64
CALCOCO1-218ENST00000550804 SPATA12Q7Z6I5 190 aa11.03□□□□□ -0.64
CALCOCO1-218ENST00000550804 GFRA4Q9GZZ7 299 aa11.03□□□□□ -0.64
CALCOCO1-218ENST00000550804 FAM181BA6NEQ2 426 aa11.02□□□□□ -0.64
CALCOCO1-218ENST00000550804 TMEM219Q86XT9 240 aa11.02□□□□□ -0.64
CALCOCO1-218ENST00000550804 LYPD1Q8N2G4 141 aa11.02□□□□□ -0.64
CALCOCO1-218ENST00000550804 SVIPQ8NHG7 77 aa11.02□□□□□ -0.64
CALCOCO1-218ENST00000550804 THYN1Q9P016 225 aa11.02□□□□□ -0.64
CALCOCO1-218ENST00000550804 LINC00527Q9UJ94 153 aa11.02□□□□□ -0.64
CALCOCO1-218ENST00000550804 ZFP30Q9Y2G7 519 aa11.02□□□□□ -0.64
CALCOCO1-218ENST00000550804 FAM208BQ5VWN6 2430 aa11.02□□□□□ -0.64
CALCOCO1-218ENST00000550804 CENPEQ02224 2701 aa11.02□□□□□ -0.65
CALCOCO1-218ENST00000550804 OOSP1A8MZH6 123 aa11.02□□□□□ -0.65
CALCOCO1-218ENST00000550804 CHEK1O14757 476 aa11.02□□□□□ -0.65
CALCOCO1-218ENST00000550804 IGHG4P01861 327 aa11.02□□□□□ -0.65
CALCOCO1-218ENST00000550804 SRSF1Q07955 248 aaKnown RBP eCLIP11.02□□□□□ -0.657e-7■■□□□ 11.7
CALCOCO1-218ENST00000550804 Q8TAT8 98 aa11.02□□□□□ -0.65
CALCOCO1-218ENST00000550804 RNF24Q9Y225 148 aa11.02□□□□□ -0.65
CALCOCO1-218ENST00000550804 M0R143 59 aa11.01□□□□□ -0.65
CALCOCO1-218ENST00000550804 CTRLP40313 264 aa11.01□□□□□ -0.65
CALCOCO1-218ENST00000550804 SPATA45Q537H7 98 aa11.01□□□□□ -0.65
CALCOCO1-218ENST00000550804 CCL19Q99731 98 aa11.01□□□□□ -0.65
CALCOCO1-218ENST00000550804 VGLL1Q99990 258 aa11.01□□□□□ -0.65
CALCOCO1-218ENST00000550804 AAMDCQ9H7C9 122 aa11.01□□□□□ -0.65
CALCOCO1-218ENST00000550804 SOX21Q9Y651 276 aaPredicted RBP11.01□□□□□ -0.65
CALCOCO1-218ENST00000550804 LOC102724200A0A096LPH7 203 aaPredicted RBP11.01□□□□□ -0.65
CALCOCO1-218ENST00000550804 CENPVL3A0A0U1RRI6 287 aa11.01□□□□□ -0.65
CALCOCO1-218ENST00000550804 C2orf70A6NJV1 201 aa11.01□□□□□ -0.65
CALCOCO1-218ENST00000550804 K7EQM0 130 aa11.01□□□□□ -0.65
CALCOCO1-218ENST00000550804 HAX1O00165 279 aa11.01□□□□□ -0.65
CALCOCO1-218ENST00000550804 CSN3P07498 182 aa11.01□□□□□ -0.65
CALCOCO1-218ENST00000550804 RHOGP84095 191 aa11.01□□□□□ -0.65
CALCOCO1-218ENST00000550804 ZNF48Q96MX3 618 aaPredicted RBP11.01□□□□□ -0.65
CALCOCO1-218ENST00000550804 IGHV3-49A0A0A0MS15 119 aa11□□□□□ -0.65
CALCOCO1-218ENST00000550804 MCRIP2Q9BUT9 160 aaKnown RBP11□□□□□ -0.65
CALCOCO1-218ENST00000550804 TRBV6-1A0A0K0K1D8 114 aa11□□□□□ -0.65
CALCOCO1-218ENST00000550804 A0A1B0GUT8 65 aa11□□□□□ -0.65
CALCOCO1-218ENST00000550804 FAM231BA6NCW3 169 aa11□□□□□ -0.65
CALCOCO1-218ENST00000550804 BRD3OSQ6XYD6 125 aa11□□□□□ -0.65
CALCOCO1-218ENST00000550804 ZNF207O43670 478 aaKnown RBP10.99□□□□□ -0.65
CALCOCO1-218ENST00000550804 ZNF80P51504 273 aaPredicted RBP10.99□□□□□ -0.65
CALCOCO1-218ENST00000550804 BATFQ16520 125 aa10.99□□□□□ -0.65
CALCOCO1-218ENST00000550804 CLEC19AQ6UXS0 136 aa10.99□□□□□ -0.65
CALCOCO1-218ENST00000550804 OR4B1Q8NGF8 309 aa10.99□□□□□ -0.65
CALCOCO1-218ENST00000550804 RABAC1Q9UI14 185 aa10.99□□□□□ -0.65
CALCOCO1-218ENST00000550804 NPFFO15130 113 aa10.98□□□□□ -0.65
CALCOCO1-218ENST00000550804 PDE6HQ13956 83 aa10.98□□□□□ -0.65
CALCOCO1-218ENST00000550804 RNF182Q8N6D2 247 aa10.98□□□□□ -0.65
CALCOCO1-218ENST00000550804 ZNF502Q8TBZ5 544 aa10.98□□□□□ -0.65
CALCOCO1-218ENST00000550804 TIMM8BQ9Y5J9 83 aaPredicted RBP10.98□□□□□ -0.65
CALCOCO1-218ENST00000550804 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.98□□□□□ -0.65
CALCOCO1-218ENST00000550804 IGHV1-24A0A0C4DH33 117 aa10.98□□□□□ -0.65
CALCOCO1-218ENST00000550804 PRAC2D3DTV9 90 aa10.98□□□□□ -0.65
CALCOCO1-218ENST00000550804 RPL7P18124 248 aaKnown RBP10.98□□□□□ -0.65
CALCOCO1-218ENST00000550804 CSN1S1P47710 185 aa10.98□□□□□ -0.65
CALCOCO1-218ENST00000550804 ERCC8Q13216 396 aa10.98□□□□□ -0.65
CALCOCO1-218ENST00000550804 DMRTA1Q5VZB9 504 aa10.98□□□□□ -0.65
CALCOCO1-218ENST00000550804 ZNF575Q86XF7 245 aa10.98□□□□□ -0.65
CALCOCO1-218ENST00000550804 NDFIP1Q9BT67 221 aa10.98□□□□□ -0.65
CALCOCO1-218ENST00000550804 TMEM213A2RRL7 107 aa10.97□□□□□ -0.65
CALCOCO1-218ENST00000550804 SH2D1AO60880 128 aa10.97□□□□□ -0.65
CALCOCO1-218ENST00000550804 LYZL1Q6UWQ5 148 aa10.97□□□□□ -0.65
CALCOCO1-218ENST00000550804 CCDC140Q96MF4 163 aa10.97□□□□□ -0.65
CALCOCO1-218ENST00000550804 PRR25Q96S07 402 aa10.97□□□□□ -0.65
CALCOCO1-218ENST00000550804 FBN2P35556 2912 aa10.97□□□□□ -0.65
CALCOCO1-218ENST00000550804 CT45A10P0DMU9 189 aa10.97□□□□□ -0.65
CALCOCO1-218ENST00000550804 FAM110DQ8TAY7 271 aaPredicted RBP10.97□□□□□ -0.65
CALCOCO1-218ENST00000550804 TP73-AS1Q9UF72 201 aa10.97□□□□□ -0.65
CALCOCO1-218ENST00000550804 ABCA2Q9BZC7 2435 aa10.97□□□□□ -0.65
CALCOCO1-218ENST00000550804 IGHV4-61A0A0C4DH41 118 aa10.96□□□□□ -0.65
CALCOCO1-218ENST00000550804 CLPSL1A2RUU4 121 aa10.96□□□□□ -0.65
CALCOCO1-218ENST00000550804 IGLC3P0DOY3 106 aa10.96□□□□□ -0.65
CALCOCO1-218ENST00000550804 C10orf105Q8TEF2 133 aa10.96□□□□□ -0.65
CALCOCO1-218ENST00000550804 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.96□□□□□ -0.653e-6■■□□□ 12
CALCOCO1-218ENST00000550804 CHD6Q8TD26 2715 aa10.96□□□□□ -0.66
CALCOCO1-218ENST00000550804 SERTM2A0A1B0GWG4 89 aa10.96□□□□□ -0.66
CALCOCO1-218ENST00000550804 BUB3O43684 328 aa10.96□□□□□ -0.66
CALCOCO1-218ENST00000550804 ATP5J2P56134 94 aa10.96□□□□□ -0.66
CALCOCO1-218ENST00000550804 PSG9Q00887 426 aa10.96□□□□□ -0.66
CALCOCO1-218ENST00000550804 FAM106AQ4KMX7 169 aa10.96□□□□□ -0.66
CALCOCO1-218ENST00000550804 NRGNQ92686 78 aa10.96□□□□□ -0.66
CALCOCO1-218ENST00000550804 ZFAND3Q9H8U3 227 aa10.96□□□□□ -0.66
CALCOCO1-218ENST00000550804 POLQO75417 2590 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 676.1 ms