RNA–Protein interactions for RNA: ENST00000548232.1

NR4A1-209, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best) BASIC

Gene NR4A1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-209ENST00000548232 CLLU1Q5K131 121 aa9.45□□□□□ -0.9
NR4A1-209ENST00000548232 Q6ZRG5 221 aa9.45□□□□□ -0.9
NR4A1-209ENST00000548232 OR1L4Q8NGR5 311 aa9.45□□□□□ -0.9
NR4A1-209ENST00000548232 RNF141Q8WVD5 230 aa9.45□□□□□ -0.9
NR4A1-209ENST00000548232 FUT9Q9Y231 359 aa9.45□□□□□ -0.9
NR4A1-209ENST00000548232 X6R8D5 127 aa9.45□□□□□ -0.9
NR4A1-209ENST00000548232 VPS13DQ5THJ4 4388 aa9.45□□□□□ -0.9
NR4A1-209ENST00000548232 M0R2N4 97 aa9.44□□□□□ -0.9
NR4A1-209ENST00000548232 IGLC2P0DOY2 106 aa9.44□□□□□ -0.9
NR4A1-209ENST00000548232 PYYP10082 97 aa9.44□□□□□ -0.9
NR4A1-209ENST00000548232 CDC34P49427 236 aaPredicted RBP9.44□□□□□ -0.9
NR4A1-209ENST00000548232 PSMG4Q5JS54 123 aa9.44□□□□□ -0.9
NR4A1-209ENST00000548232 AKR1C8PQ5T2L2 129 aa9.44□□□□□ -0.9
NR4A1-209ENST00000548232 PCNPQ8WW12 178 aaKnown RBP9.44□□□□□ -0.9
NR4A1-209ENST00000548232 RAB24Q969Q5 203 aa9.44□□□□□ -0.9
NR4A1-209ENST00000548232 PFDN5Q99471 154 aa9.44□□□□□ -0.9
NR4A1-209ENST00000548232 MRPL32Q9BYC8 188 aaKnown RBP9.44□□□□□ -0.9
NR4A1-209ENST00000548232 KIAA1109Q2LD37 5005 aa9.43□□□□□ -0.9
NR4A1-209ENST00000548232 DEFB131BA0A096LNP1 70 aa9.43□□□□□ -0.9
NR4A1-209ENST00000548232 ZNF705EA8MWA4 302 aaPredicted RBP9.43□□□□□ -0.9
NR4A1-209ENST00000548232 H3BQ15 152 aa9.43□□□□□ -0.9
NR4A1-209ENST00000548232 SNRPCP09234 159 aaKnown RBP9.43□□□□□ -0.9
NR4A1-209ENST00000548232 STAG3L2P0CL84 134 aa9.43□□□□□ -0.9
NR4A1-209ENST00000548232 STAG3L3P0CL85 134 aa9.43□□□□□ -0.9
NR4A1-209ENST00000548232 DPPA3Q6W0C5 159 aa9.43□□□□□ -0.9
NR4A1-209ENST00000548232 LINC00336Q6ZUF6 198 aa9.43□□□□□ -0.9
NR4A1-209ENST00000548232 FAM213BQ8TBF2 198 aa9.43□□□□□ -0.9
NR4A1-209ENST00000548232 LRRC20Q8TCA0 184 aa9.43□□□□□ -0.9
NR4A1-209ENST00000548232 DCANP1Q8TF63 244 aa9.43□□□□□ -0.9
NR4A1-209ENST00000548232 FXYD5Q96DB9 178 aa9.43□□□□□ -0.9
NR4A1-209ENST00000548232 SAT2Q96F10 170 aaPredicted RBP9.43□□□□□ -0.9
NR4A1-209ENST00000548232 CELA1Q9UNI1 258 aa9.43□□□□□ -0.9
NR4A1-209ENST00000548232 CTXND1A0A1B0GTU2 59 aa9.42□□□□□ -0.9
NR4A1-209ENST00000548232 HELTA6NFD8 242 aa9.42□□□□□ -0.9
NR4A1-209ENST00000548232 SLC17A3O00476 420 aa9.42□□□□□ -0.9
NR4A1-209ENST00000548232 SOCS3O14543 225 aa9.42□□□□□ -0.9
NR4A1-209ENST00000548232 MBP02144 154 aa9.42□□□□□ -0.9
NR4A1-209ENST00000548232 ARL14EPLP0DKL9 152 aa9.42□□□□□ -0.9
NR4A1-209ENST00000548232 FGF8P55075 233 aaPredicted RBP9.42□□□□□ -0.9
NR4A1-209ENST00000548232 RAB14P61106 215 aa9.42□□□□□ -0.9
NR4A1-209ENST00000548232 RHOBP62745 196 aa9.42□□□□□ -0.9
NR4A1-209ENST00000548232 C12orf74Q32Q52 190 aa9.42□□□□□ -0.9
NR4A1-209ENST00000548232 C1orf194Q5T5A4 169 aa9.42□□□□□ -0.9
NR4A1-209ENST00000548232 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.42□□□□□ -0.9
NR4A1-209ENST00000548232 CSNK1G2-AS1Q8NCQ2 148 aa9.42□□□□□ -0.9
NR4A1-209ENST00000548232 MBD3L1Q8WWY6 194 aa9.42□□□□□ -0.9
NR4A1-209ENST00000548232 ZNF586Q9NXT0 402 aa9.42□□□□□ -0.9
NR4A1-209ENST00000548232 XCL2Q9UBD3 114 aa9.42□□□□□ -0.9
NR4A1-209ENST00000548232 H3BTX0 84 aa9.41□□□□□ -0.9
NR4A1-209ENST00000548232 NDUFB4O95168 129 aa9.41□□□□□ -0.9
NR4A1-209ENST00000548232 EMP1P54849 157 aa9.41□□□□□ -0.9
NR4A1-209ENST00000548232 NUTF2P61970 127 aaKnown RBP9.41□□□□□ -0.9
NR4A1-209ENST00000548232 BLOC1S1P78537 153 aa9.41□□□□□ -0.9
NR4A1-209ENST00000548232 LCN15Q6UWW0 184 aa9.41□□□□□ -0.9
NR4A1-209ENST00000548232 POM121L12Q8N7R1 296 aa9.41□□□□□ -0.9
NR4A1-209ENST00000548232 LYPD6BQ8NI32 183 aa9.41□□□□□ -0.9
NR4A1-209ENST00000548232 SUN5Q8TC36 379 aa9.41□□□□□ -0.9
NR4A1-209ENST00000548232 NDUFAF3Q9BU61 184 aa9.41□□□□□ -0.9
NR4A1-209ENST00000548232 ACTR3CQ9C0K3 210 aaPredicted RBP9.41□□□□□ -0.9
NR4A1-209ENST00000548232 TMPRSS5Q9H3S3 457 aa9.41□□□□□ -0.9
NR4A1-209ENST00000548232 TMEM14CQ9P0S9 112 aa9.41□□□□□ -0.9
NR4A1-209ENST00000548232 AGRNO00468 2067 aa9.41□□□□□ -0.9
NR4A1-209ENST00000548232 A0A087X0K7 114 aa9.4□□□□□ -0.9
NR4A1-209ENST00000548232 TRAV8-2A0A0B4J237 113 aa9.4□□□□□ -0.9
NR4A1-209ENST00000548232 MAP1LC3B2A6NCE7 125 aa9.4□□□□□ -0.9
NR4A1-209ENST00000548232 PRSS29PA6NIE9 313 aa9.4□□□□□ -0.9
NR4A1-209ENST00000548232 OR10J4P0C629 311 aa9.4□□□□□ -0.9
NR4A1-209ENST00000548232 P0DMU3 169 aa9.4□□□□□ -0.9
NR4A1-209ENST00000548232 FAM231AP0DMU4 169 aa9.4□□□□□ -0.9
NR4A1-209ENST00000548232 FAM231CP0DMU5 169 aa9.4□□□□□ -0.9
NR4A1-209ENST00000548232 SNRPD3P62318 126 aaKnown RBP9.4□□□□□ -0.9
NR4A1-209ENST00000548232 CCL20P78556 96 aa9.4□□□□□ -0.9
NR4A1-209ENST00000548232 SIGLEC15Q6ZMC9 328 aa9.4□□□□□ -0.9
NR4A1-209ENST00000548232 OR8I2Q8N0Y5 310 aa9.4□□□□□ -0.9
NR4A1-209ENST00000548232 C1QTNF4Q9BXJ3 329 aa9.4□□□□□ -0.9
NR4A1-209ENST00000548232 MAP1LC3BQ9GZQ8 125 aa9.4□□□□□ -0.9
NR4A1-209ENST00000548232 TRAV1-1A0A0B4J248 108 aa9.39□□□□□ -0.91
NR4A1-209ENST00000548232 A0A1B0GV50 99 aa9.39□□□□□ -0.91
NR4A1-209ENST00000548232 LINC00862A6NCI5 91 aa9.39□□□□□ -0.91
NR4A1-209ENST00000548232 IGKV3-20P01619 116 aa9.39□□□□□ -0.91
NR4A1-209ENST00000548232 GCHFRP30047 84 aa9.39□□□□□ -0.91
NR4A1-209ENST00000548232 KHDC3LQ587J8 217 aa9.39□□□□□ -0.91
NR4A1-209ENST00000548232 PAXXQ9BUH6 204 aa9.39□□□□□ -0.91
NR4A1-209ENST00000548232 IGHV3OR16-12A0A075B7B8 117 aa9.38□□□□□ -0.91
NR4A1-209ENST00000548232 A0A1W2PPV4 95 aa9.38□□□□□ -0.91
NR4A1-209ENST00000548232 OR7C2O60412 319 aa9.38□□□□□ -0.91
NR4A1-209ENST00000548232 H2AFB1P0C5Y9 115 aa9.38□□□□□ -0.91
NR4A1-209ENST00000548232 PRB4P10163 310 aaPredicted RBP9.38□□□□□ -0.91
NR4A1-209ENST00000548232 RPL7P18124 248 aaKnown RBP9.38□□□□□ -0.91
NR4A1-209ENST00000548232 FXYD7P58549 80 aa9.38□□□□□ -0.91
NR4A1-209ENST00000548232 UBE2L3P68036 154 aaKnown RBP9.38□□□□□ -0.91
NR4A1-209ENST00000548232 IGFL4Q6B9Z1 124 aa9.38□□□□□ -0.91
NR4A1-209ENST00000548232 C20orf173Q96LM9 149 aa9.38□□□□□ -0.91
NR4A1-209ENST00000548232 OR51M1Q9H341 326 aa9.38□□□□□ -0.91
NR4A1-209ENST00000548232 MED9Q9NWA0 146 aa9.38□□□□□ -0.91
NR4A1-209ENST00000548232 IGLV2-18A0A075B6J9 118 aa9.37□□□□□ -0.91
NR4A1-209ENST00000548232 TRBV19A0A075B6N1 114 aa9.37□□□□□ -0.91
NR4A1-209ENST00000548232 A0A1B0GVY2 172 aa9.37□□□□□ -0.91
NR4A1-209ENST00000548232 H3BMM0 161 aa9.37□□□□□ -0.91
NR4A1-209ENST00000548232 AMBPP02760 352 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms