RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 CA1P00915 261 aaPredicted RBP15□□□□□ -0.01
HMGA2-211ENST00000545998 SSX7Q7RTT5 188 aa15□□□□□ -0.01
HMGA2-211ENST00000545998 A8MTW9 85 aa14.99□□□□□ -0.01
HMGA2-211ENST00000545998 ARL14EPLP0DKL9 152 aa14.99□□□□□ -0.01
HMGA2-211ENST00000545998 TPT1P13693 172 aaKnown RBP14.99□□□□□ -0.01
HMGA2-211ENST00000545998 C4BPBP20851 252 aa14.99□□□□□ -0.01
HMGA2-211ENST00000545998 ZNF726P1Q15940 193 aa14.99□□□□□ -0.01
HMGA2-211ENST00000545998 EXOC3-AS1Q8N2X6 119 aa14.99□□□□□ -0.01
HMGA2-211ENST00000545998 OR4B1Q8NGF8 309 aa14.99□□□□□ -0.01
HMGA2-211ENST00000545998 PHYHIPLQ96FC7 376 aa14.99□□□□□ -0.01
HMGA2-211ENST00000545998 RCHY1Q96PM5 261 aa14.99□□□□□ -0.01
HMGA2-211ENST00000545998 PLA2G2EQ9NZK7 142 aa14.99□□□□□ -0.01
HMGA2-211ENST00000545998 IGKV3-20P01619 116 aa14.98□□□□□ -0.01
HMGA2-211ENST00000545998 ZNF705DP0CH99 300 aaPredicted RBP14.98□□□□□ -0.01
HMGA2-211ENST00000545998 ZNF705BP0CI00 300 aaPredicted RBP14.98□□□□□ -0.01
HMGA2-211ENST00000545998 DEFB135Q30KP9 77 aa14.98□□□□□ -0.01
HMGA2-211ENST00000545998 OR8A1Q8NGG7 326 aa14.98□□□□□ -0.01
HMGA2-211ENST00000545998 MRPL53Q96EL3 112 aaKnown RBP14.98□□□□□ -0.01
HMGA2-211ENST00000545998 OVOL2Q9BRP0 275 aa14.98□□□□□ -0.01
HMGA2-211ENST00000545998 U3KQK5 164 aa14.98□□□□□ -0.01
HMGA2-211ENST00000545998 PRAC2D3DTV9 90 aa14.98□□□□□ -0.01
HMGA2-211ENST00000545998 DUSP14O95147 198 aaKnown RBP14.98□□□□□ -0.01
HMGA2-211ENST00000545998 PRB4P10163 310 aaPredicted RBP14.98□□□□□ -0.01
HMGA2-211ENST00000545998 CNN1P51911 297 aaKnown RBP14.98□□□□□ -0.01
HMGA2-211ENST00000545998 NUTF2P61970 127 aaKnown RBP14.98□□□□□ -0.01
HMGA2-211ENST00000545998 PRELID1Q9Y255 219 aa14.98□□□□□ -0.01
HMGA2-211ENST00000545998 TP53TG1Q9Y2A0 90 aa14.98□□□□□ -0.01
HMGA2-211ENST00000545998 CTXND1A0A1B0GTU2 59 aa14.97□□□□□ -0.01
HMGA2-211ENST00000545998 M0R3E3 92 aa14.97□□□□□ -0.01
HMGA2-211ENST00000545998 ICAM4Q14773 271 aa14.97□□□□□ -0.01
HMGA2-211ENST00000545998 LYPD1Q8N2G4 141 aa14.97□□□□□ -0.01
HMGA2-211ENST00000545998 RNF183Q96D59 192 aa14.97□□□□□ -0.01
HMGA2-211ENST00000545998 AAMDCQ9H7C9 122 aa14.97□□□□□ -0.01
HMGA2-211ENST00000545998 GCHFRP30047 84 aa14.96□□□□□ -0.01
HMGA2-211ENST00000545998 HIST1H1AQ02539 215 aaPredicted RBP14.96□□□□□ -0.01
HMGA2-211ENST00000545998 AMTNQ6UX39 209 aa14.96□□□□□ -0.01
HMGA2-211ENST00000545998 SLC51BQ86UW2 128 aa14.96□□□□□ -0.01
HMGA2-211ENST00000545998 SUN5Q8TC36 379 aa14.96□□□□□ -0.01
HMGA2-211ENST00000545998 TMED6Q8WW62 240 aa14.96□□□□□ -0.01
HMGA2-211ENST00000545998 UMAD1C9J7I0 102 aa14.95□□□□□ -0.02
HMGA2-211ENST00000545998 SPRY2O43597 315 aa14.95□□□□□ -0.02
HMGA2-211ENST00000545998 CXorf1O96002 111 aa14.95□□□□□ -0.02
HMGA2-211ENST00000545998 RANP62826 216 aaKnown RBP14.95□□□□□ -0.02
HMGA2-211ENST00000545998 Q9H3A6 140 aa14.95□□□□□ -0.02
HMGA2-211ENST00000545998 FHITP49789 147 aa14.94□□□□□ -0.02
HMGA2-211ENST00000545998 NKX2-5P52952 324 aaPredicted RBP14.94□□□□□ -0.02
HMGA2-211ENST00000545998 CSNK1G2-AS1Q8NCQ2 148 aa14.94□□□□□ -0.02
HMGA2-211ENST00000545998 SLC35B3Q9H1N7 401 aa14.94□□□□□ -0.02
HMGA2-211ENST00000545998 OR10J6PQ8NGY7 276 aa14.94□□□□□ -0.02
HMGA2-211ENST00000545998 FXYD7P58549 80 aa14.93□□□□□ -0.02
HMGA2-211ENST00000545998 C1QTNF4Q9BXJ3 329 aa14.93□□□□□ -0.02
HMGA2-211ENST00000545998 TMEM167BQ9NRX6 74 aa14.93□□□□□ -0.02
HMGA2-211ENST00000545998 XCL2Q9UBD3 114 aa14.93□□□□□ -0.02
HMGA2-211ENST00000545998 OTORQ9NRC9 128 aa14.92□□□□□ -0.02
HMGA2-211ENST00000545998 FGF8P55075 233 aaPredicted RBP14.91□□□□□ -0.02
HMGA2-211ENST00000545998 EIF5AL1Q6IS14 154 aaKnown RBP14.91□□□□□ -0.02
HMGA2-211ENST00000545998 DPPA3Q6W0C5 159 aa14.91□□□□□ -0.02
HMGA2-211ENST00000545998 FAM213BQ8TBF2 198 aa14.91□□□□□ -0.02
HMGA2-211ENST00000545998 MAP1LC3B2A6NCE7 125 aa14.9□□□□□ -0.02
HMGA2-211ENST00000545998 NPIPB6E9PJ23 425 aa14.9□□□□□ -0.02
HMGA2-211ENST00000545998 MAP1LC3BQ9GZQ8 125 aa14.9□□□□□ -0.02
HMGA2-211ENST00000545998 TMPRSS5Q9H3S3 457 aa14.9□□□□□ -0.02
HMGA2-211ENST00000545998 PGPA6NDG6 321 aa14.9□□□□□ -0.02
HMGA2-211ENST00000545998 IQCF2Q8IXL9 164 aa14.9□□□□□ -0.02
HMGA2-211ENST00000545998 BOLA2-SMG1P6H3BVE0 249 aa14.89□□□□□ -0.03
HMGA2-211ENST00000545998 M0R2Z0 102 aa14.89□□□□□ -0.03
HMGA2-211ENST00000545998 SPINK13Q1W4C9 94 aa14.89□□□□□ -0.03
HMGA2-211ENST00000545998 OR11H2Q8NH07 326 aa14.89□□□□□ -0.03
HMGA2-211ENST00000545998 MBD3L1Q8WWY6 194 aa14.89□□□□□ -0.03
HMGA2-211ENST00000545998 RARRES2Q99969 163 aa14.89□□□□□ -0.03
HMGA2-211ENST00000545998 PPP1R14DQ9NXH3 145 aa14.89□□□□□ -0.03
HMGA2-211ENST00000545998 IGKV2-40A0A087WW87 121 aaPredicted RBP14.88□□□□□ -0.03
HMGA2-211ENST00000545998 IGKV2D-40P01614 121 aaPredicted RBP14.88□□□□□ -0.03
HMGA2-211ENST00000545998 AMBPP02760 352 aa14.88□□□□□ -0.03
HMGA2-211ENST00000545998 CT45A10P0DMU9 189 aa14.88□□□□□ -0.03
HMGA2-211ENST00000545998 CSN1S1P47710 185 aa14.88□□□□□ -0.03
HMGA2-211ENST00000545998 ERCC8Q13216 396 aa14.88□□□□□ -0.03
HMGA2-211ENST00000545998 FAM74A1Q5RGS3 127 aa14.88□□□□□ -0.03
HMGA2-211ENST00000545998 C9orf47Q6ZRZ4 202 aa14.88□□□□□ -0.03
HMGA2-211ENST00000545998 RXFP4Q8TDU9 374 aa14.88□□□□□ -0.03
HMGA2-211ENST00000545998 DIRC3C9JPN6 131 aa14.87□□□□□ -0.03
HMGA2-211ENST00000545998 CRXO43186 299 aaPredicted RBP14.87□□□□□ -0.03
HMGA2-211ENST00000545998 SULT1A2P50226 295 aa14.87□□□□□ -0.03
HMGA2-211ENST00000545998 RAB5CP51148 216 aa14.87□□□□□ -0.03
HMGA2-211ENST00000545998 LINC00477Q96M19 166 aa14.87□□□□□ -0.03
HMGA2-211ENST00000545998 AGPAT4-IT1Q9H0P7 198 aa14.87□□□□□ -0.03
HMGA2-211ENST00000545998 BOLA1Q9Y3E2 137 aa14.87□□□□□ -0.03
HMGA2-211ENST00000545998 ZNF705EA8MWA4 302 aaPredicted RBP14.86□□□□□ -0.03
HMGA2-211ENST00000545998 CSMD3Q7Z407 3707 aa14.86□□□□□ -0.03
HMGA2-211ENST00000545998 ARL6IP6Q8N6S5 226 aa14.86□□□□□ -0.03
HMGA2-211ENST00000545998 CMTM2Q8TAZ6 248 aa14.86□□□□□ -0.03
HMGA2-211ENST00000545998 SFT2D1Q8WV19 159 aa14.86□□□□□ -0.03
HMGA2-211ENST00000545998 IGF2BP2-AS1Q96M15 143 aa14.86□□□□□ -0.03
HMGA2-211ENST00000545998 ODF3Q96PU9 254 aa14.86□□□□□ -0.03
HMGA2-211ENST00000545998 VGLL1Q99990 258 aa14.86□□□□□ -0.03
HMGA2-211ENST00000545998 EDA2RQ9HAV5 297 aa14.86□□□□□ -0.03
HMGA2-211ENST00000545998 A0A1W2PRE2 83 aa14.85□□□□□ -0.03
HMGA2-211ENST00000545998 RBAKDNA6NC62 111 aa14.85□□□□□ -0.03
HMGA2-211ENST00000545998 GGTLC3B5MD39 225 aa14.85□□□□□ -0.03
HMGA2-211ENST00000545998 ZNF705AQ6ZN79 300 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms