RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 VWC2Q2TAL6 325 aa11.46□□□□□ -0.57
DDX55-212ENST00000544738 RNF212Q495C1 297 aa11.46□□□□□ -0.57
DDX55-212ENST00000544738 STX12Q86Y82 276 aa11.46□□□□□ -0.57
DDX55-212ENST00000544738 UBE2DNLQ8IWF7 75 aa11.46□□□□□ -0.57
DDX55-212ENST00000544738 PFDN5Q99471 154 aa11.46□□□□□ -0.57
DDX55-212ENST00000544738 RPL29P47914 159 aaKnown RBP11.45□□□□□ -0.58
DDX55-212ENST00000544738 ASAH1Q13510 395 aa11.45□□□□□ -0.58
DDX55-212ENST00000544738 RAB32Q13637 225 aa11.45□□□□□ -0.58
DDX55-212ENST00000544738 OPCMLQ14982 345 aa11.45□□□□□ -0.58
DDX55-212ENST00000544738 ATP6V1FQ16864 119 aa11.45□□□□□ -0.58
DDX55-212ENST00000544738 C1orf134Q5TEV5 83 aa11.45□□□□□ -0.58
DDX55-212ENST00000544738 MIC13Q5XKP0 118 aa11.45□□□□□ -0.58
DDX55-212ENST00000544738 Q6ZR54 194 aa11.45□□□□□ -0.58
DDX55-212ENST00000544738 TMEM252Q8N6L7 170 aa11.45□□□□□ -0.58
DDX55-212ENST00000544738 C15orf53Q8NAA6 179 aa11.45□□□□□ -0.58
DDX55-212ENST00000544738 OR10J6PQ8NGY7 276 aa11.45□□□□□ -0.58
DDX55-212ENST00000544738 CHAC2Q8WUX2 184 aa11.45□□□□□ -0.58
DDX55-212ENST00000544738 C20orf144Q9BQM9 153 aa11.45□□□□□ -0.58
DDX55-212ENST00000544738 PRM2P04554 102 aa11.44□□□□□ -0.58
DDX55-212ENST00000544738 IGLC2P0DOY2 106 aa11.44□□□□□ -0.58
DDX55-212ENST00000544738 DEFB130BP0DP73 79 aa11.44□□□□□ -0.58
DDX55-212ENST00000544738 DEFB130AP0DP74 79 aa11.44□□□□□ -0.58
DDX55-212ENST00000544738 AZU1P20160 251 aa11.44□□□□□ -0.58
DDX55-212ENST00000544738 MORN5Q5VZ52 161 aa11.44□□□□□ -0.58
DDX55-212ENST00000544738 TMEM88Q6PEY1 159 aa11.44□□□□□ -0.58
DDX55-212ENST00000544738 ZNF493Q6ZR52 646 aa11.44□□□□□ -0.58
DDX55-212ENST00000544738 C16orf74Q96GX8 76 aa11.44□□□□□ -0.58
DDX55-212ENST00000544738 H7BYZ3 331 aa11.43□□□□□ -0.58
DDX55-212ENST00000544738 SNRPCP09234 159 aaKnown RBP11.43□□□□□ -0.58
DDX55-212ENST00000544738 HTN1P15515 57 aa11.43□□□□□ -0.58
DDX55-212ENST00000544738 BAXQ07812 192 aa11.43□□□□□ -0.58
DDX55-212ENST00000544738 SAT2Q96F10 170 aaPredicted RBP11.43□□□□□ -0.58
DDX55-212ENST00000544738 GPN1Q9HCN4 374 aaPredicted RBP11.43□□□□□ -0.58
DDX55-212ENST00000544738 SLC39A9Q9NUM3 307 aa11.43□□□□□ -0.58
DDX55-212ENST00000544738 TIMM8BQ9Y5J9 83 aaPredicted RBP11.43□□□□□ -0.58
DDX55-212ENST00000544738 UBE2L5PA0A1B0GUS4 154 aa11.42□□□□□ -0.58
DDX55-212ENST00000544738 IGSF23A1L1A6 192 aa11.42□□□□□ -0.58
DDX55-212ENST00000544738 PLAC8L1A1L4L8 177 aa11.42□□□□□ -0.58
DDX55-212ENST00000544738 H3BQ15 152 aa11.42□□□□□ -0.58
DDX55-212ENST00000544738 SLC17A3O00476 420 aa11.42□□□□□ -0.58
DDX55-212ENST00000544738 ZNF253O75346 499 aa11.42□□□□□ -0.58
DDX55-212ENST00000544738 MPDU1O75352 247 aa11.42□□□□□ -0.58
DDX55-212ENST00000544738 ATP5G1P05496 136 aa11.42□□□□□ -0.58
DDX55-212ENST00000544738 ATP5G3P48201 142 aa11.42□□□□□ -0.58
DDX55-212ENST00000544738 TRAV5A0A0B4J249 113 aa11.41□□□□□ -0.58
DDX55-212ENST00000544738 CBY3A6NI87 242 aa11.41□□□□□ -0.58
DDX55-212ENST00000544738 H3BTX0 84 aa11.41□□□□□ -0.58
DDX55-212ENST00000544738 RLN2P04090 185 aa11.41□□□□□ -0.58
DDX55-212ENST00000544738 FAM3BP58499 235 aaPredicted RBP11.41□□□□□ -0.58
DDX55-212ENST00000544738 TNP2Q05952 138 aa11.41□□□□□ -0.58
DDX55-212ENST00000544738 ENKURQ8TC29 256 aa11.41□□□□□ -0.58
DDX55-212ENST00000544738 TMEM263Q8WUH6 116 aaKnown RBP11.41□□□□□ -0.58
DDX55-212ENST00000544738 PRAC2D3DTV9 90 aa11.4□□□□□ -0.58
DDX55-212ENST00000544738 PRB4P10163 310 aaPredicted RBP11.4□□□□□ -0.58
DDX55-212ENST00000544738 FGF7P21781 194 aa11.4□□□□□ -0.58
DDX55-212ENST00000544738 FCN2Q15485 313 aa11.4□□□□□ -0.58
DDX55-212ENST00000544738 CCDC28AQ8IWP9 274 aa11.4□□□□□ -0.58
DDX55-212ENST00000544738 ODF3Q96PU9 254 aa11.4□□□□□ -0.58
DDX55-212ENST00000544738 SLC25A31Q9H0C2 315 aa11.4□□□□□ -0.58
DDX55-212ENST00000544738 TMEM14CQ9P0S9 112 aa11.4□□□□□ -0.58
DDX55-212ENST00000544738 SRRM2Q9UQ35 2752 aaKnown RBP11.39□□□□□ -0.59
DDX55-212ENST00000544738 F5H768 121 aa11.39□□□□□ -0.59
DDX55-212ENST00000544738 PRAF2O60831 178 aa11.39□□□□□ -0.59
DDX55-212ENST00000544738 LEPP41159 167 aa11.39□□□□□ -0.59
DDX55-212ENST00000544738 CYCSP99999 105 aaKnown RBP11.39□□□□□ -0.59
DDX55-212ENST00000544738 RNASE8Q8TDE3 154 aaKnown RBP11.39□□□□□ -0.59
DDX55-212ENST00000544738 MRPL53Q96EL3 112 aaKnown RBP11.39□□□□□ -0.59
DDX55-212ENST00000544738 ZNF586Q9NXT0 402 aa11.39□□□□□ -0.59
DDX55-212ENST00000544738 TRBV19A0A075B6N1 114 aa11.38□□□□□ -0.59
DDX55-212ENST00000544738 E5RGE8 158 aa11.38□□□□□ -0.59
DDX55-212ENST00000544738 NPIPB6E9PJ23 425 aa11.38□□□□□ -0.59
DDX55-212ENST00000544738 UPK1BO75841 260 aa11.38□□□□□ -0.59
DDX55-212ENST00000544738 HIST1H1EP10412 219 aaKnown RBP11.38□□□□□ -0.59
DDX55-212ENST00000544738 PDE6HQ13956 83 aa11.38□□□□□ -0.59
DDX55-212ENST00000544738 ATG101Q9BSB4 218 aa11.38□□□□□ -0.59
DDX55-212ENST00000544738 NMES1Q9C002 83 aa11.38□□□□□ -0.59
DDX55-212ENST00000544738 NOP10Q9NPE3 64 aaKnown RBP11.38□□□□□ -0.59
DDX55-212ENST00000544738 PRELID1Q9Y255 219 aa11.38□□□□□ -0.59
DDX55-212ENST00000544738 TIMM9Q9Y5J7 89 aa11.38□□□□□ -0.59
DDX55-212ENST00000544738 NHLH2Q02577 135 aa11.37□□□□□ -0.59
DDX55-212ENST00000544738 GFI1BQ5VTD9 330 aa11.37□□□□□ -0.59
DDX55-212ENST00000544738 NPCDR1Q9BY65 106 aa11.37□□□□□ -0.59
DDX55-212ENST00000544738 PARD6GQ9BYG4 376 aaPredicted RBP11.37□□□□□ -0.59
DDX55-212ENST00000544738 CT45A10P0DMU9 189 aa11.36□□□□□ -0.59
DDX55-212ENST00000544738 KIR3DS1Q14943 382 aa11.36□□□□□ -0.59
DDX55-212ENST00000544738 OR5C1Q8NGR4 320 aa11.36□□□□□ -0.59
DDX55-212ENST00000544738 PYGO2Q9BRQ0 406 aa11.36□□□□□ -0.59
DDX55-212ENST00000544738 KCNIP2Q9NS61 270 aa11.36□□□□□ -0.59
DDX55-212ENST00000544738 SNURFLB1AK76 121 aa11.35□□□□□ -0.59
DDX55-212ENST00000544738 INMT-MINDY4F8WBC2 141 aa11.35□□□□□ -0.59
DDX55-212ENST00000544738 SIX6O95475 246 aa11.35□□□□□ -0.59
DDX55-212ENST00000544738 NUDT3O95989 172 aa11.35□□□□□ -0.59
DDX55-212ENST00000544738 THAP6Q8TBB0 222 aa11.35□□□□□ -0.59
DDX55-212ENST00000544738 LINC00477Q96M19 166 aa11.35□□□□□ -0.59
DDX55-212ENST00000544738 AAMDCQ9H7C9 122 aa11.35□□□□□ -0.59
DDX55-212ENST00000544738 PTTG2Q9NZH5 202 aa11.35□□□□□ -0.59
DDX55-212ENST00000544738 TRAV12-3A0A0B4J271 114 aa11.34□□□□□ -0.59
DDX55-212ENST00000544738 A6NHS1 94 aa11.34□□□□□ -0.59
DDX55-212ENST00000544738 J3KRW8 73 aa11.34□□□□□ -0.59
DDX55-212ENST00000544738 NDUFB4O95168 129 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms