RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 UBTD1Q9HAC8 227 aa5.11□□□□□ -1.59
PTPRO-208ENST00000542557 LPAR2Q9HBW0 351 aa5.11□□□□□ -1.59
PTPRO-208ENST00000542557 RABAC1Q9UI14 185 aa5.11□□□□□ -1.59
PTPRO-208ENST00000542557 ABCA1O95477 2261 aa5.11□□□□□ -1.59
PTPRO-208ENST00000542557 M0R3E3 92 aa5.11□□□□□ -1.59
PTPRO-208ENST00000542557 NDUFS7O75251 213 aa5.11□□□□□ -1.59
PTPRO-208ENST00000542557 CTSGP08311 255 aa5.11□□□□□ -1.59
PTPRO-208ENST00000542557 CT45A10P0DMU9 189 aa5.11□□□□□ -1.59
PTPRO-208ENST00000542557 RIGQ13278 110 aa5.11□□□□□ -1.59
PTPRO-208ENST00000542557 ZNF705AQ6ZN79 300 aaPredicted RBP5.11□□□□□ -1.59
PTPRO-208ENST00000542557 Q71RC1 249 aaPredicted RBP5.11□□□□□ -1.59
PTPRO-208ENST00000542557 S4R3C0 116 aa5.11□□□□□ -1.59
PTPRO-208ENST00000542557 ATRXP46100 2492 aa5.11□□□□□ -1.59
PTPRO-208ENST00000542557 TACC2O95359 2948 aa5.11□□□□□ -1.59
PTPRO-208ENST00000542557 C20orf202A1L168 122 aa5.1□□□□□ -1.59
PTPRO-208ENST00000542557 C2orf70A6NJV1 201 aa5.1□□□□□ -1.59
PTPRO-208ENST00000542557 CRIP1P50238 77 aa5.1□□□□□ -1.59
PTPRO-208ENST00000542557 RAB9AP51151 201 aa5.1□□□□□ -1.59
PTPRO-208ENST00000542557 LMO4P61968 165 aa5.1□□□□□ -1.59
PTPRO-208ENST00000542557 SPATA45Q537H7 98 aa5.1□□□□□ -1.59
PTPRO-208ENST00000542557 FAM120AOSQ5T036 256 aa5.1□□□□□ -1.59
PTPRO-208ENST00000542557 BCL6BQ8N143 479 aaPredicted RBP5.1□□□□□ -1.59
PTPRO-208ENST00000542557 ZNF502Q8TBZ5 544 aa5.1□□□□□ -1.59
PTPRO-208ENST00000542557 BEX4Q9NWD9 120 aaPredicted RBP5.1□□□□□ -1.59
PTPRO-208ENST00000542557 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.1□□□□□ -1.59
PTPRO-208ENST00000542557 OR2T8A6NH00 312 aa5.1□□□□□ -1.59
PTPRO-208ENST00000542557 CRXO43186 299 aaPredicted RBP5.1□□□□□ -1.59
PTPRO-208ENST00000542557 EBLN2Q6P2I7 272 aa5.1□□□□□ -1.59
PTPRO-208ENST00000542557 KLHDC1Q8N7A1 406 aa5.1□□□□□ -1.59
PTPRO-208ENST00000542557 UQCR10Q9UDW1 63 aa5.1□□□□□ -1.59
PTPRO-208ENST00000542557 A0A087X0K7 114 aa5.1□□□□□ -1.59
PTPRO-208ENST00000542557 IGHV1-24A0A0C4DH33 117 aa5.1□□□□□ -1.59
PTPRO-208ENST00000542557 ARMS2P0C7Q2 107 aa5.1□□□□□ -1.59
PTPRO-208ENST00000542557 IGLC3P0DOY3 106 aa5.1□□□□□ -1.59
PTPRO-208ENST00000542557 SAA4P35542 130 aa5.1□□□□□ -1.59
PTPRO-208ENST00000542557 LY6DQ14210 128 aa5.1□□□□□ -1.59
PTPRO-208ENST00000542557 ZNF493Q6ZR52 646 aa5.1□□□□□ -1.59
PTPRO-208ENST00000542557 BPESC1Q9GZL8 116 aa5.1□□□□□ -1.59
PTPRO-208ENST00000542557 ATP6V0E1O15342 81 aa5.09□□□□□ -1.59
PTPRO-208ENST00000542557 OR5AL1P0C617 328 aa5.09□□□□□ -1.59
PTPRO-208ENST00000542557 LINC00614P0C842 121 aa5.09□□□□□ -1.59
PTPRO-208ENST00000542557 RNF224P0DH78 156 aa5.09□□□□□ -1.59
PTPRO-208ENST00000542557 C16orf92Q96LL3 132 aa5.09□□□□□ -1.59
PTPRO-208ENST00000542557 TMEM70Q9BUB7 260 aa5.09□□□□□ -1.59
PTPRO-208ENST00000542557 ZFAND3Q9H8U3 227 aa5.09□□□□□ -1.59
PTPRO-208ENST00000542557 HIVEP3Q5T1R4 2406 aa5.09□□□□□ -1.59
PTPRO-208ENST00000542557 CENPVL3A0A0U1RRI6 287 aa5.09□□□□□ -1.6
PTPRO-208ENST00000542557 NPFFO15130 113 aa5.09□□□□□ -1.6
PTPRO-208ENST00000542557 IGHV3-23P01764 117 aa5.09□□□□□ -1.6
PTPRO-208ENST00000542557 C15orf32Q32M92 178 aa5.09□□□□□ -1.6
PTPRO-208ENST00000542557 UNQ5815/PRO19632Q6UWF5 114 aa5.09□□□□□ -1.6
PTPRO-208ENST00000542557 C8orf49Q96NF6 230 aa5.09□□□□□ -1.6
PTPRO-208ENST00000542557 SMAD5-AS1Q9Y6J3 95 aa5.09□□□□□ -1.6
PTPRO-208ENST00000542557 NBASA2RRP1 2371 aa5.08□□□□□ -1.6
PTPRO-208ENST00000542557 TRAV9-2A0A087WT02 112 aa5.08□□□□□ -1.6
PTPRO-208ENST00000542557 SH2D1AO60880 128 aa5.08□□□□□ -1.6
PTPRO-208ENST00000542557 RPS20P60866 119 aaKnown RBP5.08□□□□□ -1.6
PTPRO-208ENST00000542557 RHOGP84095 191 aa5.08□□□□□ -1.6
PTPRO-208ENST00000542557 PRR25Q96S07 402 aa5.08□□□□□ -1.6
PTPRO-208ENST00000542557 IGKV2-40A0A087WW87 121 aaPredicted RBP5.08□□□□□ -1.6
PTPRO-208ENST00000542557 TMEM189A5PLL7 270 aa5.08□□□□□ -1.6
PTPRO-208ENST00000542557 LEPROTL1O95214 131 aa5.08□□□□□ -1.6
PTPRO-208ENST00000542557 IGKV2D-40P01614 121 aaPredicted RBP5.08□□□□□ -1.6
PTPRO-208ENST00000542557 GPR183P32249 361 aa5.08□□□□□ -1.6
PTPRO-208ENST00000542557 CRIP2P52943 208 aaPredicted RBP5.08□□□□□ -1.6
PTPRO-208ENST00000542557 ECSCRQ19T08 205 aa5.08□□□□□ -1.6
PTPRO-208ENST00000542557 LCN12Q6JVE5 192 aa5.08□□□□□ -1.6
PTPRO-208ENST00000542557 C5orf56Q8N8D9 126 aa5.08□□□□□ -1.6
PTPRO-208ENST00000542557 RNASE8Q8TDE3 154 aaKnown RBP5.08□□□□□ -1.6
PTPRO-208ENST00000542557 PGPEP1Q9NXJ5 209 aa5.08□□□□□ -1.6
PTPRO-208ENST00000542557 RBAKDNA6NC62 111 aa5.07□□□□□ -1.6
PTPRO-208ENST00000542557 SYS1-DBNDD2H3BUS1 97 aa5.07□□□□□ -1.6
PTPRO-208ENST00000542557 C19orf84I3L1E1 186 aa5.07□□□□□ -1.6
PTPRO-208ENST00000542557 TCAPO15273 167 aa5.07□□□□□ -1.6
PTPRO-208ENST00000542557 WIPF1O43516 503 aa5.07□□□□□ -1.6
PTPRO-208ENST00000542557 BUB3O43684 328 aa5.07□□□□□ -1.6
PTPRO-208ENST00000542557 IGHG4P01861 327 aa5.07□□□□□ -1.6
PTPRO-208ENST00000542557 KHDC1LQ5JSQ8 128 aa5.07□□□□□ -1.6
PTPRO-208ENST00000542557 EEF1AKMT3Q96AZ1 226 aa5.07□□□□□ -1.6
PTPRO-208ENST00000542557 SLC50A1Q9BRV3 221 aa5.07□□□□□ -1.6
PTPRO-208ENST00000542557 CLEC5AQ9NY25 188 aa5.07□□□□□ -1.6
PTPRO-208ENST00000542557 TRBV7-1A0A0A6YYK4 115 aa5.07□□□□□ -1.6
PTPRO-208ENST00000542557 M0QZ24 198 aa5.07□□□□□ -1.6
PTPRO-208ENST00000542557 IGHV4-39P01824 125 aa5.07□□□□□ -1.6
PTPRO-208ENST00000542557 UQCRFS1P47985 274 aa5.07□□□□□ -1.6
PTPRO-208ENST00000542557 PAX8Q06710 450 aa5.07□□□□□ -1.6
PTPRO-208ENST00000542557 ASCL2Q99929 193 aa5.07□□□□□ -1.6
PTPRO-208ENST00000542557 HSPB8Q9UJY1 196 aa5.07□□□□□ -1.6
PTPRO-208ENST00000542557 MOB4Q9Y3A3 225 aa5.07□□□□□ -1.6
PTPRO-208ENST00000542557 U3KQK5 164 aa5.07□□□□□ -1.6
PTPRO-208ENST00000542557 GNLYP22749 145 aa5.07□□□□□ -1.6
PTPRO-208ENST00000542557 HNRNPA3P51991 378 aaKnown RBP5.07□□□□□ -1.6
PTPRO-208ENST00000542557 C19orf54Q5BKX5 351 aa5.07□□□□□ -1.6
PTPRO-208ENST00000542557 PRR31Q5SQ13 230 aa5.07□□□□□ -1.6
PTPRO-208ENST00000542557 LYZL1Q6UWQ5 148 aa5.07□□□□□ -1.6
PTPRO-208ENST00000542557 MRPL53Q96EL3 112 aaKnown RBP5.07□□□□□ -1.6
PTPRO-208ENST00000542557 SPTBN4Q9H254 2564 aa5.06□□□□□ -1.6
PTPRO-208ENST00000542557 ITPR1Q14643 2758 aa5.06□□□□□ -1.6
PTPRO-208ENST00000542557 CLPSL1A2RUU4 121 aa5.06□□□□□ -1.6
PTPRO-208ENST00000542557 IGLC6P0CF74 106 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms