RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 APRG1Q8IVJ8 170 aa17.16■□□□□ 0.34
HOMER3-205ENST00000542541 GNG13Q9P2W3 67 aa17.16■□□□□ 0.34
HOMER3-205ENST00000542541 FAM74A7A6NL05 159 aa17.15■□□□□ 0.34
HOMER3-205ENST00000542541 PAGE4O60829 102 aa17.15■□□□□ 0.34
HOMER3-205ENST00000542541 CST9LP1Q5W188 147 aa17.15■□□□□ 0.34
HOMER3-205ENST00000542541 FOXI2Q6ZQN5 318 aa17.15■□□□□ 0.34
HOMER3-205ENST00000542541 ARL6IP6Q8N6S5 226 aa17.15■□□□□ 0.34
HOMER3-205ENST00000542541 YTHDF2Q9Y5A9 579 aaKnown RBP17.15■□□□□ 0.34
HOMER3-205ENST00000542541 DNAH3Q8TD57 4116 aa17.15■□□□□ 0.34
HOMER3-205ENST00000542541 M0R3E3 92 aa17.14■□□□□ 0.33
HOMER3-205ENST00000542541 NMBP08949 121 aa17.14■□□□□ 0.33
HOMER3-205ENST00000542541 DEFB125Q8N687 156 aa17.14■□□□□ 0.33
HOMER3-205ENST00000542541 ZNF705FA8MVS1 300 aaPredicted RBP17.14■□□□□ 0.33
HOMER3-205ENST00000542541 SLC25A5P05141 298 aaKnown RBP17.14■□□□□ 0.33
HOMER3-205ENST00000542541 TAGLN2P37802 199 aaKnown RBP17.14■□□□□ 0.33
HOMER3-205ENST00000542541 C5orf17Q8NAS9 161 aa17.14■□□□□ 0.33
HOMER3-205ENST00000542541 SAV1Q9H4B6 383 aaPredicted RBP17.14■□□□□ 0.33
HOMER3-205ENST00000542541 AURKAIP1Q9NWT8 199 aaPredicted RBP17.14■□□□□ 0.33
HOMER3-205ENST00000542541 GGTLC3B5MD39 225 aa17.13■□□□□ 0.33
HOMER3-205ENST00000542541 ACTL10Q5JWF8 245 aa17.13■□□□□ 0.33
HOMER3-205ENST00000542541 PCNPQ8WW12 178 aaKnown RBP17.13■□□□□ 0.33
HOMER3-205ENST00000542541 TXNDC17Q9BRA2 123 aa17.13■□□□□ 0.33
HOMER3-205ENST00000542541 WFDC10AQ9H1F0 79 aa17.13■□□□□ 0.33
HOMER3-205ENST00000542541 TUBA4BQ9H853 241 aa17.13■□□□□ 0.33
HOMER3-205ENST00000542541 KNCNA6PVL3 124 aa17.11■□□□□ 0.33
HOMER3-205ENST00000542541 DUSP14O95147 198 aaKnown RBP17.11■□□□□ 0.33
HOMER3-205ENST00000542541 ZNF124Q15973 351 aa17.11■□□□□ 0.33
HOMER3-205ENST00000542541 STHQ8IWL8 128 aa17.11■□□□□ 0.33
HOMER3-205ENST00000542541 OR8A1Q8NGG7 326 aa17.11■□□□□ 0.33
HOMER3-205ENST00000542541 OR10J6PQ8NGY7 276 aa17.11■□□□□ 0.33
HOMER3-205ENST00000542541 TCEAL7Q9BRU2 100 aa17.11■□□□□ 0.33
HOMER3-205ENST00000542541 SRD5A3Q9H8P0 318 aa17.11■□□□□ 0.33
HOMER3-205ENST00000542541 A0A0J9YX75 114 aa17.1■□□□□ 0.33
HOMER3-205ENST00000542541 PRB2P02812 416 aaPredicted RBP17.1■□□□□ 0.33
HOMER3-205ENST00000542541 HLA-DRB4P13762 266 aa17.1■□□□□ 0.33
HOMER3-205ENST00000542541 EPDR1Q9UM22 224 aa17.1■□□□□ 0.33
HOMER3-205ENST00000542541 HLA-DRB4X5D2U9 266 aa17.1■□□□□ 0.33
HOMER3-205ENST00000542541 F6UB75 175 aa17.1■□□□□ 0.33
HOMER3-205ENST00000542541 BCL2P10415 239 aa17.1■□□□□ 0.33
HOMER3-205ENST00000542541 DEFB1P60022 68 aa17.1■□□□□ 0.33
HOMER3-205ENST00000542541 SERTM2A0A1B0GWG4 89 aa17.09■□□□□ 0.33
HOMER3-205ENST00000542541 DIRC3C9JPN6 131 aa17.09■□□□□ 0.33
HOMER3-205ENST00000542541 C11orf94C9JXX5 98 aa17.09■□□□□ 0.33
HOMER3-205ENST00000542541 PRAC2D3DTV9 90 aa17.09■□□□□ 0.33
HOMER3-205ENST00000542541 F6UZH7 168 aa17.09■□□□□ 0.33
HOMER3-205ENST00000542541 H3BMM0 161 aa17.09■□□□□ 0.33
HOMER3-205ENST00000542541 IGHV4-30-4P0DP06 118 aa17.09■□□□□ 0.33
HOMER3-205ENST00000542541 HIST1H1AQ02539 215 aaPredicted RBP17.09■□□□□ 0.33
HOMER3-205ENST00000542541 HAGHQ16775 308 aa17.09■□□□□ 0.33
HOMER3-205ENST00000542541 CLLU1Q5K131 121 aa17.09■□□□□ 0.33
HOMER3-205ENST00000542541 CCDC28AQ8IWP9 274 aa17.09■□□□□ 0.33
HOMER3-205ENST00000542541 CITED4Q96RK1 184 aa17.09■□□□□ 0.33
HOMER3-205ENST00000542541 VAX2Q9UIW0 290 aa17.09■□□□□ 0.33
HOMER3-205ENST00000542541 FBN3Q75N90 2809 aa17.08■□□□□ 0.33
HOMER3-205ENST00000542541 A8MZ25 164 aa17.08■□□□□ 0.32
HOMER3-205ENST00000542541 K7EQM0 130 aa17.08■□□□□ 0.32
HOMER3-205ENST00000542541 RGS13O14921 159 aa17.08■□□□□ 0.32
HOMER3-205ENST00000542541 GDF5OSQ5U4N7 250 aa17.08■□□□□ 0.32
HOMER3-205ENST00000542541 HIST1H2BAQ96A08 127 aa17.08■□□□□ 0.32
HOMER3-205ENST00000542541 RPH3ALQ9UNE2 315 aa17.08■□□□□ 0.32
HOMER3-205ENST00000542541 RBAKDNA6NC62 111 aa17.07■□□□□ 0.32
HOMER3-205ENST00000542541 TCRAP04437 139 aa17.07■□□□□ 0.32
HOMER3-205ENST00000542541 ATP5G3P48201 142 aa17.07■□□□□ 0.32
HOMER3-205ENST00000542541 MEF2BQ02080 365 aaPredicted RBP17.07■□□□□ 0.32
HOMER3-205ENST00000542541 OR4B1Q8NGF8 309 aa17.07■□□□□ 0.32
HOMER3-205ENST00000542541 CLUHP3Q96NS8 147 aa17.07■□□□□ 0.32
HOMER3-205ENST00000542541 RBFOX3A6NFN3 312 aa17.07■□□□□ 0.32
HOMER3-205ENST00000542541 CNN1P51911 297 aaKnown RBP17.07■□□□□ 0.32
HOMER3-205ENST00000542541 ATG101Q9BSB4 218 aa17.07■□□□□ 0.32
HOMER3-205ENST00000542541 K7EIL1 84 aa17.06■□□□□ 0.32
HOMER3-205ENST00000542541 ZNF705DP0CH99 300 aaPredicted RBP17.06■□□□□ 0.32
HOMER3-205ENST00000542541 ZNF705BP0CI00 300 aaPredicted RBP17.06■□□□□ 0.32
HOMER3-205ENST00000542541 GNG5P63218 68 aa17.06■□□□□ 0.32
HOMER3-205ENST00000542541 GOLT1AQ6ZVE7 132 aa17.06■□□□□ 0.32
HOMER3-205ENST00000542541 TRPT1Q86TN4 253 aaKnown RBP17.06■□□□□ 0.32
HOMER3-205ENST00000542541 LINC00477Q96M19 166 aa17.06■□□□□ 0.32
HOMER3-205ENST00000542541 IGKV2-40A0A087WW87 121 aaPredicted RBP17.05■□□□□ 0.32
HOMER3-205ENST00000542541 LOC102723971A0A1B0GUV8 181 aa17.05■□□□□ 0.32
HOMER3-205ENST00000542541 IGKV2D-40P01614 121 aaPredicted RBP17.05■□□□□ 0.32
HOMER3-205ENST00000542541 PRB4P10163 310 aaPredicted RBP17.05■□□□□ 0.32
HOMER3-205ENST00000542541 NUTF2P61970 127 aaKnown RBP17.05■□□□□ 0.32
HOMER3-205ENST00000542541 C9orf47Q6ZRZ4 202 aa17.05■□□□□ 0.32
HOMER3-205ENST00000542541 CYB561D1Q8N8Q1 229 aa17.05■□□□□ 0.32
HOMER3-205ENST00000542541 FAM210AQ96ND0 272 aa17.05■□□□□ 0.32
HOMER3-205ENST00000542541 EIF5A2Q9GZV4 153 aaKnown RBP17.05■□□□□ 0.32
HOMER3-205ENST00000542541 PPP1R14DQ9NXH3 145 aa17.05■□□□□ 0.32
HOMER3-205ENST00000542541 MEGF8Q7Z7M0 2845 aa17.04■□□□□ 0.32
HOMER3-205ENST00000542541 LOC102724200A0A096LPH7 203 aaPredicted RBP17.04■□□□□ 0.32
HOMER3-205ENST00000542541 NPIPB6E9PJ23 425 aa17.04■□□□□ 0.32
HOMER3-205ENST00000542541 DEFB121Q5J5C9 76 aa17.04■□□□□ 0.32
HOMER3-205ENST00000542541 TMEM78Q5T7P6 136 aa17.04■□□□□ 0.32
HOMER3-205ENST00000542541 FBLL1A6NHQ2 334 aaKnown RBP17.03■□□□□ 0.32
HOMER3-205ENST00000542541 PEX7O00628 323 aa17.03■□□□□ 0.32
HOMER3-205ENST00000542541 PDE6DO43924 150 aa17.03■□□□□ 0.32
HOMER3-205ENST00000542541 IGKV3-20P01619 116 aa17.03■□□□□ 0.32
HOMER3-205ENST00000542541 RPL35AP18077 110 aaKnown RBP17.03■□□□□ 0.32
HOMER3-205ENST00000542541 ZNF506Q5JVG8 444 aa17.03■□□□□ 0.32
HOMER3-205ENST00000542541 RARRES2Q99969 163 aa17.03■□□□□ 0.32
HOMER3-205ENST00000542541 AGPAT4-IT1Q9H0P7 198 aa17.03■□□□□ 0.32
HOMER3-205ENST00000542541 RBMY1BA6NDE4 496 aaKnown RBP17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms