RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 MORN5Q5VZ52 161 aa14.33□□□□□ -0.12
DDB1-220ENST00000542337 ZNF493Q6ZR52 646 aa14.33□□□□□ -0.12
DDB1-220ENST00000542337 CCDC28AQ8IWP9 274 aa14.33□□□□□ -0.12
DDB1-220ENST00000542337 CHAC2Q8WUX2 184 aa14.33□□□□□ -0.12
DDB1-220ENST00000542337 TIMM8BQ9Y5J9 83 aaPredicted RBP14.33□□□□□ -0.12
DDB1-220ENST00000542337 TRAV5A0A0B4J249 113 aa14.32□□□□□ -0.12
DDB1-220ENST00000542337 H3BQ15 152 aa14.32□□□□□ -0.12
DDB1-220ENST00000542337 SLC17A3O00476 420 aa14.32□□□□□ -0.12
DDB1-220ENST00000542337 PRB4P10163 310 aaPredicted RBP14.32□□□□□ -0.12
DDB1-220ENST00000542337 SLC25A31Q9H0C2 315 aa14.32□□□□□ -0.12
DDB1-220ENST00000542337 LGALS9BQ3B8N2 356 aa14.31□□□□□ -0.12
DDB1-220ENST00000542337 SAT2Q96F10 170 aaPredicted RBP14.31□□□□□ -0.12
DDB1-220ENST00000542337 CBY3A6NI87 242 aa14.3□□□□□ -0.12
DDB1-220ENST00000542337 F5H768 121 aa14.3□□□□□ -0.12
DDB1-220ENST00000542337 ZNF253O75346 499 aa14.3□□□□□ -0.12
DDB1-220ENST00000542337 UPK1BO75841 260 aa14.3□□□□□ -0.12
DDB1-220ENST00000542337 ATP5G1P05496 136 aa14.3□□□□□ -0.12
DDB1-220ENST00000542337 LEPP41159 167 aa14.3□□□□□ -0.12
DDB1-220ENST00000542337 ATP5G3P48201 142 aa14.3□□□□□ -0.12
DDB1-220ENST00000542337 CYCSP99999 105 aaKnown RBP14.3□□□□□ -0.12
DDB1-220ENST00000542337 FCN2Q15485 313 aa14.3□□□□□ -0.12
DDB1-220ENST00000542337 ATG101Q9BSB4 218 aa14.3□□□□□ -0.12
DDB1-220ENST00000542337 TIMM9Q9Y5J7 89 aa14.3□□□□□ -0.12
DDB1-220ENST00000542337 PRAC2D3DTV9 90 aa14.29□□□□□ -0.12
DDB1-220ENST00000542337 E5RGE8 158 aa14.29□□□□□ -0.12
DDB1-220ENST00000542337 PRAF2O60831 178 aa14.29□□□□□ -0.12
DDB1-220ENST00000542337 TMEM263Q8WUH6 116 aaKnown RBP14.29□□□□□ -0.12
DDB1-220ENST00000542337 ZNF586Q9NXT0 402 aa14.29□□□□□ -0.12
DDB1-220ENST00000542337 TMEM14CQ9P0S9 112 aa14.29□□□□□ -0.12
DDB1-220ENST00000542337 IGLV2-18A0A075B6J9 118 aa14.28□□□□□ -0.12
DDB1-220ENST00000542337 PLAC8L1A1L4L8 177 aa14.28□□□□□ -0.12
DDB1-220ENST00000542337 HIST1H1EP10412 219 aaKnown RBP14.28□□□□□ -0.12
DDB1-220ENST00000542337 FAM3BP58499 235 aaPredicted RBP14.28□□□□□ -0.12
DDB1-220ENST00000542337 ODF3Q96PU9 254 aa14.28□□□□□ -0.12
DDB1-220ENST00000542337 NMES1Q9C002 83 aa14.28□□□□□ -0.12
DDB1-220ENST00000542337 NOP10Q9NPE3 64 aaKnown RBP14.28□□□□□ -0.12
DDB1-220ENST00000542337 PRELID1Q9Y255 219 aa14.28□□□□□ -0.12
DDB1-220ENST00000542337 TRBV19A0A075B6N1 114 aa14.27□□□□□ -0.13
DDB1-220ENST00000542337 SIX6O95475 246 aa14.27□□□□□ -0.13
DDB1-220ENST00000542337 NHLH2Q02577 135 aa14.27□□□□□ -0.13
DDB1-220ENST00000542337 SOHLH1Q5JUK2 328 aa14.27□□□□□ -0.13
DDB1-220ENST00000542337 GFI1BQ5VTD9 330 aa14.27□□□□□ -0.13
DDB1-220ENST00000542337 OR5C1Q8NGR4 320 aa14.27□□□□□ -0.13
DDB1-220ENST00000542337 MRPL53Q96EL3 112 aaKnown RBP14.27□□□□□ -0.13
DDB1-220ENST00000542337 NPCDR1Q9BY65 106 aa14.27□□□□□ -0.13
DDB1-220ENST00000542337 KCNIP2Q9NS61 270 aa14.27□□□□□ -0.13
DDB1-220ENST00000542337 INMT-MINDY4F8WBC2 141 aa14.26□□□□□ -0.13
DDB1-220ENST00000542337 J3KRW8 73 aa14.26□□□□□ -0.13
DDB1-220ENST00000542337 NUDT3O95989 172 aa14.26□□□□□ -0.13
DDB1-220ENST00000542337 CT45A10P0DMU9 189 aa14.26□□□□□ -0.13
DDB1-220ENST00000542337 PDE6HQ13956 83 aa14.26□□□□□ -0.13
DDB1-220ENST00000542337 LRRC37A5PQ49AS3 106 aa14.26□□□□□ -0.13
DDB1-220ENST00000542337 RNASE8Q8TDE3 154 aaKnown RBP14.26□□□□□ -0.13
DDB1-220ENST00000542337 PARD6GQ9BYG4 376 aaPredicted RBP14.26□□□□□ -0.13
DDB1-220ENST00000542337 AAMDCQ9H7C9 122 aa14.26□□□□□ -0.13
DDB1-220ENST00000542337 PRSS29PA6NIE9 313 aa14.25□□□□□ -0.13
DDB1-220ENST00000542337 SNURFLB1AK76 121 aa14.25□□□□□ -0.13
DDB1-220ENST00000542337 NPIPB6E9PJ23 425 aa14.25□□□□□ -0.13
DDB1-220ENST00000542337 KIR3DS1Q14943 382 aa14.25□□□□□ -0.13
DDB1-220ENST00000542337 THAP6Q8TBB0 222 aa14.25□□□□□ -0.13
DDB1-220ENST00000542337 PTTG2Q9NZH5 202 aa14.25□□□□□ -0.13
DDB1-220ENST00000542337 TRAV12-3A0A0B4J271 114 aa14.24□□□□□ -0.13
DDB1-220ENST00000542337 DEFA1P59665 94 aa14.24□□□□□ -0.13
DDB1-220ENST00000542337 DEFA3P59666 94 aa14.24□□□□□ -0.13
DDB1-220ENST00000542337 CLINT1Q14677 625 aa14.24□□□□□ -0.13
DDB1-220ENST00000542337 BLNKQ8WV28 456 aa14.24□□□□□ -0.13
DDB1-220ENST00000542337 LINC00477Q96M19 166 aa14.24□□□□□ -0.13
DDB1-220ENST00000542337 PYGO2Q9BRQ0 406 aa14.24□□□□□ -0.13
DDB1-220ENST00000542337 HECTD4Q9Y4D8 3996 aa14.24□□□□□ -0.13
DDB1-220ENST00000542337 A6NHS1 94 aa14.23□□□□□ -0.13
DDB1-220ENST00000542337 C17orf112F2Z3M2 114 aa14.23□□□□□ -0.13
DDB1-220ENST00000542337 SLC25A5P05141 298 aaKnown RBP14.23□□□□□ -0.13
DDB1-220ENST00000542337 CCL18P55774 89 aa14.23□□□□□ -0.13
DDB1-220ENST00000542337 OR5AC2Q9NZP5 309 aa14.23□□□□□ -0.13
DDB1-220ENST00000542337 PYYP10082 97 aa14.22□□□□□ -0.13
DDB1-220ENST00000542337 M0R3E3 92 aa14.21□□□□□ -0.13
DDB1-220ENST00000542337 RTL8CO15255 209 aa14.21□□□□□ -0.13
DDB1-220ENST00000542337 SSNA1O43805 119 aa14.21□□□□□ -0.13
DDB1-220ENST00000542337 PET100P0DJ07 73 aa14.21□□□□□ -0.13
DDB1-220ENST00000542337 ERCC8Q13216 396 aa14.21□□□□□ -0.13
DDB1-220ENST00000542337 OR5I1Q13606 314 aa14.21□□□□□ -0.13
DDB1-220ENST00000542337 GCSAMLQ5JQS6 135 aa14.21□□□□□ -0.13
DDB1-220ENST00000542337 Q6ZR54 194 aa14.21□□□□□ -0.13
DDB1-220ENST00000542337 MARVELD1Q9BSK0 173 aa14.21□□□□□ -0.13
DDB1-220ENST00000542337 MRPL32Q9BYC8 188 aaKnown RBP14.21□□□□□ -0.13
DDB1-220ENST00000542337 OR51M1Q9H341 326 aa14.21□□□□□ -0.13
DDB1-220ENST00000542337 C7orf71A4D174 169 aa14.2□□□□□ -0.14
DDB1-220ENST00000542337 NDUFB4O95168 129 aa14.2□□□□□ -0.14
DDB1-220ENST00000542337 NBEAP1P0C6P0 100 aa14.2□□□□□ -0.14
DDB1-220ENST00000542337 IFITM3Q01628 133 aa14.2□□□□□ -0.14
DDB1-220ENST00000542337 C1orf134Q5TEV5 83 aa14.2□□□□□ -0.14
DDB1-220ENST00000542337 MIR17HGQ75NE6 70 aa14.2□□□□□ -0.14
DDB1-220ENST00000542337 EXOC3-AS1Q8N2X6 119 aa14.2□□□□□ -0.14
DDB1-220ENST00000542337 PPP1R1CQ8WVI7 109 aa14.2□□□□□ -0.14
DDB1-220ENST00000542337 SLC25A2Q9BXI2 301 aa14.2□□□□□ -0.14
DDB1-220ENST00000542337 WDR61Q9GZS3 305 aaKnown RBP14.2□□□□□ -0.14
DDB1-220ENST00000542337 GAGE12BA1L429 117 aa14.19□□□□□ -0.14
DDB1-220ENST00000542337 GAGE7O76087 117 aa14.19□□□□□ -0.14
DDB1-220ENST00000542337 GAGE12FP0CL80 117 aa14.19□□□□□ -0.14
DDB1-220ENST00000542337 GAGE12GP0CL81 117 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms