RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 C5orf64Q2M2E5 130 aa11.6□□□□□ -0.55
DDX55-209ENST00000542286 FANCD2OSQ96PS1 177 aa11.6□□□□□ -0.55
DDX55-209ENST00000542286 GPR183P32249 361 aa11.59□□□□□ -0.55
DDX55-209ENST00000542286 FAM162BQ5T6X4 162 aa11.59□□□□□ -0.55
DDX55-209ENST00000542286 ZNF491Q8N8L2 437 aa11.59□□□□□ -0.55
DDX55-209ENST00000542286 C5orf17Q8NAS9 161 aa11.59□□□□□ -0.55
DDX55-209ENST00000542286 CHRDL1Q9BU40 450 aa11.59□□□□□ -0.55
DDX55-209ENST00000542286 ZNF785A8K8V0 405 aa11.59□□□□□ -0.55
DDX55-209ENST00000542286 ODF3BA8MYP8 253 aa11.59□□□□□ -0.55
DDX55-209ENST00000542286 PRTN3P24158 256 aa11.59□□□□□ -0.55
DDX55-209ENST00000542286 MLST8Q9BVC4 326 aa11.59□□□□□ -0.55
DDX55-209ENST00000542286 FAM231BA6NCW3 169 aa11.58□□□□□ -0.56
DDX55-209ENST00000542286 HLA-DRB1P01911 266 aa11.58□□□□□ -0.56
DDX55-209ENST00000542286 HOXB4P17483 251 aaPredicted RBP11.58□□□□□ -0.56
DDX55-209ENST00000542286 FOXE3Q13461 319 aa11.58□□□□□ -0.56
DDX55-209ENST00000542286 PMCHL2Q9BQD1 86 aa11.58□□□□□ -0.56
DDX55-209ENST00000542286 LINC01548A6NM66 108 aa11.58□□□□□ -0.56
DDX55-209ENST00000542286 SNAI2O43623 268 aa11.58□□□□□ -0.56
DDX55-209ENST00000542286 GNG7O60262 68 aa11.58□□□□□ -0.56
DDX55-209ENST00000542286 IGLV2-11P01706 119 aa11.58□□□□□ -0.56
DDX55-209ENST00000542286 STXBP6Q8NFX7 210 aa11.58□□□□□ -0.56
DDX55-209ENST00000542286 RNF125Q96EQ8 232 aa11.58□□□□□ -0.56
DDX55-209ENST00000542286 FAM208BQ5VWN6 2430 aa11.58□□□□□ -0.56
DDX55-209ENST00000542286 A0A1B0GXF2 115 aa11.57□□□□□ -0.56
DDX55-209ENST00000542286 F8W735 103 aaPredicted RBP11.57□□□□□ -0.56
DDX55-209ENST00000542286 UCNP55089 124 aa11.57□□□□□ -0.56
DDX55-209ENST00000542286 CHCHD1Q96BP2 118 aaKnown RBP11.57□□□□□ -0.56
DDX55-209ENST00000542286 TPPP3Q9BW30 176 aa11.57□□□□□ -0.56
DDX55-209ENST00000542286 KLF12Q9Y4X4 402 aa11.57□□□□□ -0.56
DDX55-209ENST00000542286 IGHV3OR16-13A0A075B7E8 117 aa11.57□□□□□ -0.56
DDX55-209ENST00000542286 IGHV3-74A0A0B4J1X5 117 aa11.57□□□□□ -0.56
DDX55-209ENST00000542286 G3V4G9 280 aa11.57□□□□□ -0.56
DDX55-209ENST00000542286 LTAP01374 205 aa11.57□□□□□ -0.56
DDX55-209ENST00000542286 P01737 135 aa11.57□□□□□ -0.56
DDX55-209ENST00000542286 PAX2Q02962 417 aa11.57□□□□□ -0.56
DDX55-209ENST00000542286 Q86TA4 180 aa11.57□□□□□ -0.56
DDX55-209ENST00000542286 ARPC1AQ92747 370 aa11.57□□□□□ -0.56
DDX55-209ENST00000542286 MAP1LC3CQ9BXW4 147 aa11.57□□□□□ -0.56
DDX55-209ENST00000542286 HIST1H1EP10412 219 aaKnown RBP11.56□□□□□ -0.56
DDX55-209ENST00000542286 ZNF138P52744 262 aa11.56□□□□□ -0.56
DDX55-209ENST00000542286 ATP5L2Q7Z4Y8 100 aa11.56□□□□□ -0.56
DDX55-209ENST00000542286 BPESC1Q9GZL8 116 aa11.56□□□□□ -0.56
DDX55-209ENST00000542286 MS4A6AQ9H2W1 248 aa11.56□□□□□ -0.56
DDX55-209ENST00000542286 RPP21Q9H633 154 aaKnown RBP11.56□□□□□ -0.56
DDX55-209ENST00000542286 TMSB15BA0A087X1C1 80 aa11.56□□□□□ -0.56
DDX55-209ENST00000542286 IGHV3-66A0A0C4DH42 116 aa11.56□□□□□ -0.56
DDX55-209ENST00000542286 GNLYP22749 145 aa11.56□□□□□ -0.56
DDX55-209ENST00000542286 HLA-DMBP28068 263 aa11.56□□□□□ -0.56
DDX55-209ENST00000542286 PLP1P60201 277 aa11.56□□□□□ -0.56
DDX55-209ENST00000542286 HBBP68871 147 aa11.56□□□□□ -0.56
DDX55-209ENST00000542286 CUBNO60494 3623 aa11.56□□□□□ -0.56
DDX55-209ENST00000542286 NDUFA3O95167 84 aa11.56□□□□□ -0.56
DDX55-209ENST00000542286 COL8A1P27658 744 aa11.56□□□□□ -0.56
DDX55-209ENST00000542286 ECSCRQ19T08 205 aa11.56□□□□□ -0.56
DDX55-209ENST00000542286 UFSP1Q6NVU6 142 aa11.56□□□□□ -0.56
DDX55-209ENST00000542286 PET117Q6UWS5 81 aa11.56□□□□□ -0.56
DDX55-209ENST00000542286 C8orf49Q96NF6 230 aa11.56□□□□□ -0.56
DDX55-209ENST00000542286 LINC00527Q9UJ94 153 aa11.56□□□□□ -0.56
DDX55-209ENST00000542286 TIMM8BQ9Y5J9 83 aaPredicted RBP11.56□□□□□ -0.56
DDX55-209ENST00000542286 TRBV19A0A075B6N1 114 aa11.55□□□□□ -0.56
DDX55-209ENST00000542286 CEACAM3P40198 252 aa11.55□□□□□ -0.56
DDX55-209ENST00000542286 C2orf91Q6ZV80 131 aa11.55□□□□□ -0.56
DDX55-209ENST00000542286 GTF2H5Q6ZYL4 71 aa11.55□□□□□ -0.56
DDX55-209ENST00000542286 SHANK2-AS3Q9BTD1 123 aa11.55□□□□□ -0.56
DDX55-209ENST00000542286 NPBQ8NG41 125 aa11.55□□□□□ -0.56
DDX55-209ENST00000542286 DAZAP1Q96EP5 407 aaKnown RBP11.55□□□□□ -0.56
DDX55-209ENST00000542286 IGHV3-49A0A0A0MS15 119 aa11.54□□□□□ -0.56
DDX55-209ENST00000542286 C19orf71A6NCJ1 209 aa11.54□□□□□ -0.56
DDX55-209ENST00000542286 H3BRN7 92 aa11.54□□□□□ -0.56
DDX55-209ENST00000542286 TMEM97Q5BJF2 176 aa11.54□□□□□ -0.56
DDX55-209ENST00000542286 SIGLEC15Q6ZMC9 328 aa11.54□□□□□ -0.56
DDX55-209ENST00000542286 BPIFA4PQ86YQ2 179 aa11.54□□□□□ -0.56
DDX55-209ENST00000542286 FMC1Q96HJ9 113 aa11.54□□□□□ -0.56
DDX55-209ENST00000542286 AP1S3Q96PC3 154 aa11.54□□□□□ -0.56
DDX55-209ENST00000542286 SOX21Q9Y651 276 aaPredicted RBP11.54□□□□□ -0.56
DDX55-209ENST00000542286 LRRK2Q5S007 2527 aa11.54□□□□□ -0.56
DDX55-209ENST00000542286 IGLV11-55A0A075B6I3 123 aa11.54□□□□□ -0.56
DDX55-209ENST00000542286 G3V318 75 aa11.54□□□□□ -0.56
DDX55-209ENST00000542286 COX8AP10176 69 aa11.54□□□□□ -0.56
DDX55-209ENST00000542286 EGR2P11161 476 aaPredicted RBP11.54□□□□□ -0.56
DDX55-209ENST00000542286 SEC11AP67812 179 aa11.54□□□□□ -0.56
DDX55-209ENST00000542286 NEU4Q8WWR8 484 aaPredicted RBP11.54□□□□□ -0.56
DDX55-209ENST00000542286 OTORQ9NRC9 128 aa11.54□□□□□ -0.56
DDX55-209ENST00000542286 M0R1W7 72 aa11.53□□□□□ -0.56
DDX55-209ENST00000542286 OR5AL1P0C617 328 aa11.53□□□□□ -0.56
DDX55-209ENST00000542286 CRIP1P50238 77 aa11.53□□□□□ -0.56
DDX55-209ENST00000542286 TMEM219Q86XT9 240 aa11.53□□□□□ -0.56
DDX55-209ENST00000542286 NAA38Q9BRA0 125 aaKnown RBP11.53□□□□□ -0.56
DDX55-209ENST00000542286 TMUB1Q9BVT8 246 aa11.53□□□□□ -0.56
DDX55-209ENST00000542286 PRSS22Q9GZN4 317 aa11.53□□□□□ -0.56
DDX55-209ENST00000542286 IGKV2-40A0A087WW87 121 aaPredicted RBP11.53□□□□□ -0.56
DDX55-209ENST00000542286 IGHV7-81A0A0B4J1V7 117 aa11.53□□□□□ -0.56
DDX55-209ENST00000542286 IGKV2D-40P01614 121 aaPredicted RBP11.53□□□□□ -0.56
DDX55-209ENST00000542286 Q8TAT8 98 aa11.53□□□□□ -0.56
DDX55-209ENST00000542286 SAA4P35542 130 aa11.52□□□□□ -0.56
DDX55-209ENST00000542286 ZNF562Q6V9R5 426 aa11.52□□□□□ -0.56
DDX55-209ENST00000542286 DTX2Q86UW9 622 aa11.52□□□□□ -0.56
DDX55-209ENST00000542286 ZNF414Q96IQ9 312 aa11.52□□□□□ -0.56
DDX55-209ENST00000542286 JMJD8Q96S16 334 aa11.52□□□□□ -0.56
DDX55-209ENST00000542286 RNF5Q99942 180 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms