RNA–Protein interactions for RNA: ENST00000541970.5

PDCD2-208, Transcript of programmed cell death 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD2, Length 3,378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-208ENST00000541970 SMIM17P0DL12 118 aa13.34□□□□□ -0.27
PDCD2-208ENST00000541970 C2orf83Q53S99 150 aa13.34□□□□□ -0.27
PDCD2-208ENST00000541970 CCDC144NLQ6NUI1 221 aa13.34□□□□□ -0.27
PDCD2-208ENST00000541970 DDB2Q92466 427 aa13.34□□□□□ -0.27
PDCD2-208ENST00000541970 C7orf69Q9H7B7 122 aa13.34□□□□□ -0.27
PDCD2-208ENST00000541970 CD3EP07766 207 aa13.34□□□□□ -0.27
PDCD2-208ENST00000541970 SOX21Q9Y651 276 aaPredicted RBP13.34□□□□□ -0.27
PDCD2-208ENST00000541970 HES1Q14469 280 aa13.33□□□□□ -0.28
PDCD2-208ENST00000541970 AMN1Q8IY45 258 aa13.33□□□□□ -0.28
PDCD2-208ENST00000541970 VGLL1Q99990 258 aa13.33□□□□□ -0.28
PDCD2-208ENST00000541970 TMEM200BQ69YZ2 307 aa13.33□□□□□ -0.28
PDCD2-208ENST00000541970 OR5AN1Q8NGI8 311 aa13.33□□□□□ -0.28
PDCD2-208ENST00000541970 OR1L8Q8NGR8 309 aa13.33□□□□□ -0.28
PDCD2-208ENST00000541970 IFI27L1Q96BM0 104 aa13.33□□□□□ -0.28
PDCD2-208ENST00000541970 PRELID3AQ96N28 172 aa13.33□□□□□ -0.28
PDCD2-208ENST00000541970 TCRBV4S1A1TA0A5B7 111 aa13.32□□□□□ -0.28
PDCD2-208ENST00000541970 FAM169BQ8N8A8 192 aa13.32□□□□□ -0.28
PDCD2-208ENST00000541970 STXBP6Q8NFX7 210 aa13.32□□□□□ -0.28
PDCD2-208ENST00000541970 CSPG4Q6UVK1 2322 aa13.32□□□□□ -0.28
PDCD2-208ENST00000541970 TMEM213A2RRL7 107 aa13.32□□□□□ -0.28
PDCD2-208ENST00000541970 CT45A6P0DMU7 189 aa13.32□□□□□ -0.28
PDCD2-208ENST00000541970 CT45A5P0DMU8 189 aa13.32□□□□□ -0.28
PDCD2-208ENST00000541970 CT45A7P0DMV0 189 aa13.32□□□□□ -0.28
PDCD2-208ENST00000541970 INSL3P51460 131 aa13.32□□□□□ -0.28
PDCD2-208ENST00000541970 SIGLEC8Q9NYZ4 499 aa13.32□□□□□ -0.28
PDCD2-208ENST00000541970 IGLV3-9A0A075B6K5 115 aa13.32□□□□□ -0.28
PDCD2-208ENST00000541970 GTSCR1Q86UQ5 136 aa13.32□□□□□ -0.28
PDCD2-208ENST00000541970 GEMIN7Q9H840 131 aaKnown RBP13.32□□□□□ -0.28
PDCD2-208ENST00000541970 S4R3C0 116 aa13.32□□□□□ -0.28
PDCD2-208ENST00000541970 APOBEC3AP31941 199 aaPredicted RBP13.31□□□□□ -0.28
PDCD2-208ENST00000541970 RNASE6Q93091 150 aaKnown RBP13.31□□□□□ -0.28
PDCD2-208ENST00000541970 FMC1Q96HJ9 113 aa13.31□□□□□ -0.28
PDCD2-208ENST00000541970 RPUSD1Q9UJJ7 312 aaKnown RBP13.31□□□□□ -0.28
PDCD2-208ENST00000541970 A0A1B0GWB2 263 aa13.31□□□□□ -0.28
PDCD2-208ENST00000541970 Q8NA96 180 aa13.31□□□□□ -0.28
PDCD2-208ENST00000541970 MYO18BQ8IUG5 2567 aa13.31□□□□□ -0.28
PDCD2-208ENST00000541970 THBDP07204 575 aa13.31□□□□□ -0.28
PDCD2-208ENST00000541970 CNIH1O95406 144 aa13.3□□□□□ -0.28
PDCD2-208ENST00000541970 ZNF479Q96JC4 524 aa13.3□□□□□ -0.28
PDCD2-208ENST00000541970 SPAG8Q99932 426 aaPredicted RBP13.3□□□□□ -0.28
PDCD2-208ENST00000541970 CHAC1Q9BUX1 264 aa13.3□□□□□ -0.28
PDCD2-208ENST00000541970 E7EQL1 145 aa13.3□□□□□ -0.28
PDCD2-208ENST00000541970 PRSS22Q9GZN4 317 aa13.3□□□□□ -0.28
PDCD2-208ENST00000541970 MLST8Q9BVC4 326 aa13.29□□□□□ -0.28
PDCD2-208ENST00000541970 C19orf71A6NCJ1 209 aa13.29□□□□□ -0.28
PDCD2-208ENST00000541970 LHBP01229 141 aa13.29□□□□□ -0.28
PDCD2-208ENST00000541970 CKS2P33552 79 aa13.29□□□□□ -0.28
PDCD2-208ENST00000541970 WT1-ASQ06250 92 aa13.29□□□□□ -0.28
PDCD2-208ENST00000541970 Q86TA4 180 aa13.29□□□□□ -0.28
PDCD2-208ENST00000541970 HBDP02042 147 aa13.29□□□□□ -0.28
PDCD2-208ENST00000541970 SUB1P53999 127 aaKnown RBP eCLIP13.29□□□□□ -0.286e-8■■■■■ 38.7
PDCD2-208ENST00000541970 PIP4P2Q8N4L2 257 aa13.29□□□□□ -0.28
PDCD2-208ENST00000541970 CACNG8Q8WXS5 425 aa13.29□□□□□ -0.28
PDCD2-208ENST00000541970 TPSG1Q9NRR2 321 aa13.29□□□□□ -0.28
PDCD2-208ENST00000541970 IGKV2D-26A0A0A0MRZ7 120 aa13.28□□□□□ -0.28
PDCD2-208ENST00000541970 NPIPB6E9PJ23 425 aa13.28□□□□□ -0.28
PDCD2-208ENST00000541970 HAX1O00165 279 aa13.28□□□□□ -0.28
PDCD2-208ENST00000541970 LY6DQ14210 128 aa13.28□□□□□ -0.28
PDCD2-208ENST00000541970 RUSC1-AS1Q66K80 236 aa13.28□□□□□ -0.28
PDCD2-208ENST00000541970 DSCAML1Q8TD84 2053 aa13.28□□□□□ -0.28
PDCD2-208ENST00000541970 TMEM178BH3BS89 294 aa13.28□□□□□ -0.28
PDCD2-208ENST00000541970 CT45A10P0DMU9 189 aa13.27□□□□□ -0.28
PDCD2-208ENST00000541970 TMEM160Q9NX00 188 aa13.27□□□□□ -0.28
PDCD2-208ENST00000541970 LINC00312Q9Y6C7 94 aa13.27□□□□□ -0.28
PDCD2-208ENST00000541970 PTPRBP23467 1997 aa13.27□□□□□ -0.29
PDCD2-208ENST00000541970 AGRNO00468 2067 aa13.27□□□□□ -0.29
PDCD2-208ENST00000541970 LGALS9BQ3B8N2 356 aa13.27□□□□□ -0.29
PDCD2-208ENST00000541970 LGALS9CQ6DKI2 356 aa13.27□□□□□ -0.29
PDCD2-208ENST00000541970 C20orf78Q9BR46 151 aa13.27□□□□□ -0.29
PDCD2-208ENST00000541970 A0A096LNJ9 63 aa13.26□□□□□ -0.29
PDCD2-208ENST00000541970 RBP4P02753 201 aa13.26□□□□□ -0.29
PDCD2-208ENST00000541970 CNTFRP26992 372 aa13.26□□□□□ -0.29
PDCD2-208ENST00000541970 CT83Q5H943 113 aa13.26□□□□□ -0.29
PDCD2-208ENST00000541970 SLC25A48Q6ZT89 311 aaKnown RBP13.26□□□□□ -0.29
PDCD2-208ENST00000541970 FAM222BQ8WU58 562 aa13.26□□□□□ -0.29
PDCD2-208ENST00000541970 RPEQ96AT9 228 aa13.26□□□□□ -0.29
PDCD2-208ENST00000541970 SPANXB1Q9NS25 103 aaPredicted RBP13.26□□□□□ -0.29
PDCD2-208ENST00000541970 CTSZQ9UBR2 303 aa13.26□□□□□ -0.29
PDCD2-208ENST00000541970 USP9YO00507 2555 aaPredicted RBP13.26□□□□□ -0.29
PDCD2-208ENST00000541970 DOPEY2Q9Y3R5 2298 aa13.26□□□□□ -0.29
PDCD2-208ENST00000541970 ORMDL3Q8N138 153 aa13.26□□□□□ -0.29
PDCD2-208ENST00000541970 CSMD1Q96PZ7 3565 aa13.26□□□□□ -0.29
PDCD2-208ENST00000541970 MC5RP33032 325 aa13.26□□□□□ -0.29
PDCD2-208ENST00000541970 RITA1Q96K30 269 aa13.26□□□□□ -0.29
PDCD2-208ENST00000541970 IGKV1D-37A0A075B6S9 117 aa13.25□□□□□ -0.29
PDCD2-208ENST00000541970 GAGE13Q4V321 117 aa13.25□□□□□ -0.29
PDCD2-208ENST00000541970 LYZL1Q6UWQ5 148 aa13.25□□□□□ -0.29
PDCD2-208ENST00000541970 GFRA4Q9GZZ7 299 aa13.25□□□□□ -0.29
PDCD2-208ENST00000541970 ZNF492Q9P255 531 aa13.25□□□□□ -0.29
PDCD2-208ENST00000541970 SVEP1Q4LDE5 3571 aa13.25□□□□□ -0.29
PDCD2-208ENST00000541970 M0R3E3 92 aa13.25□□□□□ -0.29
PDCD2-208ENST00000541970 EVI2AP22794 236 aa13.25□□□□□ -0.29
PDCD2-208ENST00000541970 TWIST1Q15672 202 aa13.25□□□□□ -0.29
PDCD2-208ENST00000541970 HIST1H4GQ99525 98 aa13.25□□□□□ -0.29
PDCD2-208ENST00000541970 FOXC2Q99958 501 aa13.25□□□□□ -0.29
PDCD2-208ENST00000541970 SRSF8Q9BRL6 282 aaKnown RBP13.25□□□□□ -0.29
PDCD2-208ENST00000541970 POLQO75417 2590 aa13.25□□□□□ -0.29
PDCD2-208ENST00000541970 SCGB1A1P11684 91 aa13.24□□□□□ -0.29
PDCD2-208ENST00000541970 C17orf77Q96MU5 243 aa13.24□□□□□ -0.29
PDCD2-208ENST00000541970 VMA21Q3ZAQ7 101 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms