RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 GRNP28799 593 aaKnown RBP11.62□□□□□ -0.55
GCFC2-211ENST00000541687 C5orf64Q2M2E5 130 aa11.62□□□□□ -0.55
GCFC2-211ENST00000541687 LYZL1Q6UWQ5 148 aa11.62□□□□□ -0.55
GCFC2-211ENST00000541687 D6R8Y8 96 aa11.61□□□□□ -0.55
GCFC2-211ENST00000541687 C1orf229Q6ZS94 237 aaPredicted RBP11.61□□□□□ -0.55
GCFC2-211ENST00000541687 VMO1Q7Z5L0 202 aa11.61□□□□□ -0.55
GCFC2-211ENST00000541687 ATP5L2Q7Z4Y8 100 aa11.61□□□□□ -0.55
GCFC2-211ENST00000541687 SMKR1H3BMG3 65 aa11.61□□□□□ -0.55
GCFC2-211ENST00000541687 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.61□□□□□ -0.55
GCFC2-211ENST00000541687 NAV3Q8IVL0 2385 aa11.61□□□□□ -0.55
GCFC2-211ENST00000541687 TDGF1P3P51864 188 aa11.6□□□□□ -0.55
GCFC2-211ENST00000541687 RRN3P1Q2M238 152 aa11.6□□□□□ -0.55
GCFC2-211ENST00000541687 IGFL2Q6UWQ7 119 aa11.6□□□□□ -0.55
GCFC2-211ENST00000541687 DNAL4O96015 105 aa11.6□□□□□ -0.55
GCFC2-211ENST00000541687 P0C879 139 aa11.6□□□□□ -0.55
GCFC2-211ENST00000541687 POU2AF1Q16633 256 aa11.6□□□□□ -0.55
GCFC2-211ENST00000541687 KMT2EQ8IZD2 1858 aa11.6□□□□□ -0.55
GCFC2-211ENST00000541687 IGKV3D-20A0A0C4DH25 116 aa11.6□□□□□ -0.55
GCFC2-211ENST00000541687 TSPAN13O95857 204 aa11.6□□□□□ -0.55
GCFC2-211ENST00000541687 MPV17L2Q567V2 206 aa11.6□□□□□ -0.55
GCFC2-211ENST00000541687 Q86TA4 180 aa11.6□□□□□ -0.55
GCFC2-211ENST00000541687 WFDC12Q8WWY7 111 aa11.6□□□□□ -0.55
GCFC2-211ENST00000541687 PRO3102Q9H379 93 aa11.6□□□□□ -0.55
GCFC2-211ENST00000541687 CFAP54Q96N23 3096 aa11.6□□□□□ -0.55
GCFC2-211ENST00000541687 FABP5P3A8MUU1 101 aa11.59□□□□□ -0.55
GCFC2-211ENST00000541687 UBE2L6O14933 153 aa11.59□□□□□ -0.55
GCFC2-211ENST00000541687 TOMM40O96008 361 aa11.59□□□□□ -0.55
GCFC2-211ENST00000541687 NDPQ00604 133 aa11.59□□□□□ -0.55
GCFC2-211ENST00000541687 SAMD13Q5VXD3 122 aa11.59□□□□□ -0.55
GCFC2-211ENST00000541687 FXYD5Q96DB9 178 aa11.59□□□□□ -0.55
GCFC2-211ENST00000541687 TANC2Q9HCD6 1990 aa11.59□□□□□ -0.55
GCFC2-211ENST00000541687 A0A0U1RRA0 63 aa11.59□□□□□ -0.55
GCFC2-211ENST00000541687 HAX1O00165 279 aa11.59□□□□□ -0.55
GCFC2-211ENST00000541687 MAJINQ3KP22 176 aa11.59□□□□□ -0.55
GCFC2-211ENST00000541687 AMN1Q8IY45 258 aa11.59□□□□□ -0.55
GCFC2-211ENST00000541687 TOMM7Q9P0U1 55 aa11.59□□□□□ -0.55
GCFC2-211ENST00000541687 SRD5A1P18405 259 aa11.59□□□□□ -0.55
GCFC2-211ENST00000541687 RAB9AP51151 201 aa11.59□□□□□ -0.55
GCFC2-211ENST00000541687 C17orf77Q96MU5 243 aa11.59□□□□□ -0.55
GCFC2-211ENST00000541687 NCOR1P1Q9H4R4 102 aa11.59□□□□□ -0.55
GCFC2-211ENST00000541687 TMEM95Q3KNT9 176 aa11.58□□□□□ -0.56
GCFC2-211ENST00000541687 MRPL36Q9P0J6 103 aaKnown RBP11.58□□□□□ -0.56
GCFC2-211ENST00000541687 A0A087X0K7 114 aa11.58□□□□□ -0.56
GCFC2-211ENST00000541687 TRAV8-2A0A0B4J237 113 aa11.58□□□□□ -0.56
GCFC2-211ENST00000541687 Q6AWC8 147 aa11.58□□□□□ -0.56
GCFC2-211ENST00000541687 BRD3OSQ6XYD6 125 aa11.58□□□□□ -0.56
GCFC2-211ENST00000541687 IFI27L1Q96BM0 104 aa11.58□□□□□ -0.56
GCFC2-211ENST00000541687 HBDP02042 147 aa11.58□□□□□ -0.56
GCFC2-211ENST00000541687 ASIPP42127 132 aa11.58□□□□□ -0.56
GCFC2-211ENST00000541687 COA6Q5JTJ3 125 aaKnown RBP11.57□□□□□ -0.56
GCFC2-211ENST00000541687 TRAV12-3A0A0B4J271 114 aa11.57□□□□□ -0.56
GCFC2-211ENST00000541687 ORAOV1Q8WV07 137 aa11.57□□□□□ -0.56
GCFC2-211ENST00000541687 CPAMD8Q8IZJ3 1885 aa11.57□□□□□ -0.56
GCFC2-211ENST00000541687 TMEM213A2RRL7 107 aa11.57□□□□□ -0.56
GCFC2-211ENST00000541687 PRSS33Q8NF86 280 aa11.57□□□□□ -0.56
GCFC2-211ENST00000541687 IGLC7A0M8Q6 106 aa11.56□□□□□ -0.56
GCFC2-211ENST00000541687 SYS1-DBNDD2H3BUS1 97 aa11.56□□□□□ -0.56
GCFC2-211ENST00000541687 PAPPA-AS1Q5QFB9 102 aa11.56□□□□□ -0.56
GCFC2-211ENST00000541687 PATE2Q6UY27 113 aa11.56□□□□□ -0.56
GCFC2-211ENST00000541687 MRPL27Q9P0M9 148 aaKnown RBP11.56□□□□□ -0.56
GCFC2-211ENST00000541687 PSG3Q16557 428 aa11.56□□□□□ -0.56
GCFC2-211ENST00000541687 CHCHD1Q96BP2 118 aaKnown RBP11.56□□□□□ -0.56
GCFC2-211ENST00000541687 C8orf49Q96NF6 230 aa11.56□□□□□ -0.56
GCFC2-211ENST00000541687 SMIM27A0A1W2PRY6 76 aa11.56□□□□□ -0.56
GCFC2-211ENST00000541687 SH2D1AO60880 128 aa11.56□□□□□ -0.56
GCFC2-211ENST00000541687 TMEM249Q2WGJ8 235 aa11.56□□□□□ -0.56
GCFC2-211ENST00000541687 C7orf69Q9H7B7 122 aa11.56□□□□□ -0.56
GCFC2-211ENST00000541687 ANKRD11Q6UB99 2663 aaPredicted RBP11.56□□□□□ -0.56
GCFC2-211ENST00000541687 TRAV40A0A0B4J280 105 aa11.56□□□□□ -0.56
GCFC2-211ENST00000541687 RASL11AQ6T310 242 aa11.56□□□□□ -0.56
GCFC2-211ENST00000541687 C10orf126Q8N4M7 172 aa11.56□□□□□ -0.56
GCFC2-211ENST00000541687 C20orf144Q9BQM9 153 aa11.56□□□□□ -0.56
GCFC2-211ENST00000541687 SHANK2-AS3Q9BTD1 123 aa11.56□□□□□ -0.56
GCFC2-211ENST00000541687 MOB4Q9Y3A3 225 aa11.56□□□□□ -0.56
GCFC2-211ENST00000541687 JMJD1CQ15652 2540 aa11.55□□□□□ -0.56
GCFC2-211ENST00000541687 NDUFB8O95169 186 aa11.55□□□□□ -0.56
GCFC2-211ENST00000541687 IFI27P40305 119 aaPredicted RBP11.55□□□□□ -0.56
GCFC2-211ENST00000541687 ERCC8Q13216 396 aa11.55□□□□□ -0.56
GCFC2-211ENST00000541687 HCFC1P51610 2035 aa11.55□□□□□ -0.56
GCFC2-211ENST00000541687 NDUFS7O75251 213 aa11.55□□□□□ -0.56
GCFC2-211ENST00000541687 IGLC1P0CG04 106 aa11.55□□□□□ -0.56
GCFC2-211ENST00000541687 SNRPD3P62318 126 aaKnown RBP11.55□□□□□ -0.56
GCFC2-211ENST00000541687 PIMREGQ9BSJ6 248 aa11.55□□□□□ -0.56
GCFC2-211ENST00000541687 TNFRSF18Q9Y5U5 241 aa11.55□□□□□ -0.56
GCFC2-211ENST00000541687 RNASE4P34096 147 aaKnown RBP11.55□□□□□ -0.56
GCFC2-211ENST00000541687 CD300EQ496F6 205 aaPredicted RBP11.54□□□□□ -0.56
GCFC2-211ENST00000541687 RAX2Q96IS3 184 aa11.54□□□□□ -0.56
GCFC2-211ENST00000541687 YPEL4Q96NS1 127 aa11.54□□□□□ -0.56
GCFC2-211ENST00000541687 C22orf46C9J442 243 aa11.54□□□□□ -0.56
GCFC2-211ENST00000541687 ZNF479Q96JC4 524 aa11.54□□□□□ -0.56
GCFC2-211ENST00000541687 DUX5Q96PT3 197 aa11.54□□□□□ -0.56
GCFC2-211ENST00000541687 KIAA1549Q9HCM3 1950 aa11.54□□□□□ -0.56
GCFC2-211ENST00000541687 HIVEP3Q5T1R4 2406 aa11.54□□□□□ -0.56
GCFC2-211ENST00000541687 IGHV3-64A0A075B6Q5 118 aa11.54□□□□□ -0.56
GCFC2-211ENST00000541687 GTSCR1Q86UQ5 136 aa11.54□□□□□ -0.56
GCFC2-211ENST00000541687 RNF182Q8N6D2 247 aa11.54□□□□□ -0.56
GCFC2-211ENST00000541687 A0A1B0GW15 77 aa11.54□□□□□ -0.56
GCFC2-211ENST00000541687 C3orf36Q3SXR2 165 aa11.54□□□□□ -0.56
GCFC2-211ENST00000541687 SPTBN4Q9H254 2564 aa11.53□□□□□ -0.56
GCFC2-211ENST00000541687 TRBV19A0A075B6N1 114 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms