RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 LINC01551Q86U37 167 aa21.05■□□□□ 0.96
CCM2-218ENST00000541586 ZNF331Q9NQX6 463 aaPredicted RBP21.05■□□□□ 0.96
CCM2-218ENST00000541586 A8MWP6 167 aa21.04■□□□□ 0.96
CCM2-218ENST00000541586 KLF5Q13887 457 aaPredicted RBP21.04■□□□□ 0.96
CCM2-218ENST00000541586 C1QL4Q86Z23 238 aa21.04■□□□□ 0.96
CCM2-218ENST00000541586 VWFP04275 2813 aa21.04■□□□□ 0.96
CCM2-218ENST00000541586 TRAV34A0A0B4J273 112 aa21.04■□□□□ 0.96
CCM2-218ENST00000541586 CENPWQ5EE01 88 aa21.04■□□□□ 0.96
CCM2-218ENST00000541586 AURKAIP1Q9NWT8 199 aaPredicted RBP21.04■□□□□ 0.96
CCM2-218ENST00000541586 B4DEV8 164 aa21.03■□□□□ 0.96
CCM2-218ENST00000541586 M0R3E3 92 aa21.03■□□□□ 0.96
CCM2-218ENST00000541586 GNG4P50150 75 aa21.03■□□□□ 0.96
CCM2-218ENST00000541586 TMEM88Q6PEY1 159 aa21.03■□□□□ 0.96
CCM2-218ENST00000541586 ISLRO14498 428 aa21.02■□□□□ 0.96
CCM2-218ENST00000541586 MEOX2P50222 304 aa21.02■□□□□ 0.96
CCM2-218ENST00000541586 TAS2R60P59551 318 aa21.02■□□□□ 0.96
CCM2-218ENST00000541586 CBLN2Q8IUK8 224 aa21.02■□□□□ 0.96
CCM2-218ENST00000541586 LINC00482Q8N8I6 264 aa21.02■□□□□ 0.96
CCM2-218ENST00000541586 OCC1Q8TAD7 63 aa21.02■□□□□ 0.96
CCM2-218ENST00000541586 IGF2BP2-AS1Q96M15 143 aa21.02■□□□□ 0.96
CCM2-218ENST00000541586 KLF12Q9Y4X4 402 aa21.02■□□□□ 0.96
CCM2-218ENST00000541586 DNASE2O00115 360 aaPredicted RBP21.01■□□□□ 0.95
CCM2-218ENST00000541586 IGFL4Q6B9Z1 124 aa21.01■□□□□ 0.95
CCM2-218ENST00000541586 CD33P20138 364 aa21.01■□□□□ 0.95
CCM2-218ENST00000541586 TMEM183BQ1AE95 376 aa21.01■□□□□ 0.95
CCM2-218ENST00000541586 GOLT1AQ6ZVE7 132 aa21.01■□□□□ 0.95
CCM2-218ENST00000541586 LY96Q9Y6Y9 160 aa21.01■□□□□ 0.95
CCM2-218ENST00000541586 HLA-DMBP28068 263 aa21■□□□□ 0.95
CCM2-218ENST00000541586 SLC50A1Q9BRV3 221 aa21■□□□□ 0.95
CCM2-218ENST00000541586 UBE2G1P62253 170 aa20.99■□□□□ 0.95
CCM2-218ENST00000541586 SGK494Q96LW2 274 aa20.99■□□□□ 0.95
CCM2-218ENST00000541586 A0A087WWC5 75 aa20.98■□□□□ 0.95
CCM2-218ENST00000541586 DIRC3C9JPN6 131 aa20.98■□□□□ 0.95
CCM2-218ENST00000541586 OVOL1O14753 267 aa20.98■□□□□ 0.95
CCM2-218ENST00000541586 PRB4P10163 310 aaPredicted RBP20.98■□□□□ 0.95
CCM2-218ENST00000541586 BMI1P35226 326 aa20.98■□□□□ 0.95
CCM2-218ENST00000541586 SELENOKQ9Y6D0 94 aa20.98■□□□□ 0.95
CCM2-218ENST00000541586 K7EN84 100 aa20.98■□□□□ 0.95
CCM2-218ENST00000541586 CSN1S1P47710 185 aa20.98■□□□□ 0.95
CCM2-218ENST00000541586 ISOC2Q96AB3 205 aa20.98■□□□□ 0.95
CCM2-218ENST00000541586 FMC1Q96HJ9 113 aa20.98■□□□□ 0.95
CCM2-218ENST00000541586 TRAV8-2A0A0B4J237 113 aa20.97■□□□□ 0.95
CCM2-218ENST00000541586 C2orf70A6NJV1 201 aa20.97■□□□□ 0.95
CCM2-218ENST00000541586 S100A9P06702 114 aaKnown RBP20.97■□□□□ 0.95
CCM2-218ENST00000541586 RPL11P62913 178 aaKnown RBP20.97■□□□□ 0.95
CCM2-218ENST00000541586 RNF212Q495C1 297 aa20.97■□□□□ 0.95
CCM2-218ENST00000541586 TSPAN4O14817 238 aa20.96■□□□□ 0.95
CCM2-218ENST00000541586 IGLV2-8P01709 118 aa20.96■□□□□ 0.95
CCM2-218ENST00000541586 CBLN1P23435 193 aa20.96■□□□□ 0.95
CCM2-218ENST00000541586 RNF182Q8N6D2 247 aa20.96■□□□□ 0.95
CCM2-218ENST00000541586 ARL6IP6Q8N6S5 226 aa20.96■□□□□ 0.95
CCM2-218ENST00000541586 SMCO4Q9NRQ5 59 aa20.96■□□□□ 0.95
CCM2-218ENST00000541586 CMYA5Q8N3K9 4069 aa20.96■□□□□ 0.95
CCM2-218ENST00000541586 TRAV8-1A0A0A6YYK1 113 aa20.95■□□□□ 0.94
CCM2-218ENST00000541586 TCF24Q7RTU0 167 aa20.95■□□□□ 0.94
CCM2-218ENST00000541586 BAGE2Q86Y30 109 aa20.95■□□□□ 0.94
CCM2-218ENST00000541586 NRN1Q9NPD7 142 aa20.95■□□□□ 0.94
CCM2-218ENST00000541586 IGLV2-11P01706 119 aa20.95■□□□□ 0.94
CCM2-218ENST00000541586 OR9G4Q8NGQ1 327 aa20.95■□□□□ 0.94
CCM2-218ENST00000541586 ZNF705FA8MVS1 300 aaPredicted RBP20.94■□□□□ 0.94
CCM2-218ENST00000541586 K7EQM0 130 aa20.94■□□□□ 0.94
CCM2-218ENST00000541586 MT-ND4LP03901 98 aa20.94■□□□□ 0.94
CCM2-218ENST00000541586 LCN12Q6JVE5 192 aa20.94■□□□□ 0.94
CCM2-218ENST00000541586 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.94■□□□□ 0.94
CCM2-218ENST00000541586 TMEM75Q8N9X5 138 aa20.94■□□□□ 0.94
CCM2-218ENST00000541586 NHLRC2Q8NBF2 726 aa20.94■□□□□ 0.94
CCM2-218ENST00000541586 C16orf92Q96LL3 132 aa20.94■□□□□ 0.94
CCM2-218ENST00000541586 FOLR2P14207 255 aa20.93■□□□□ 0.94
CCM2-218ENST00000541586 PRR31Q5SQ13 230 aa20.93■□□□□ 0.94
CCM2-218ENST00000541586 WFDC9Q8NEX5 89 aa20.93■□□□□ 0.94
CCM2-218ENST00000541586 PRELID1Q9Y255 219 aa20.93■□□□□ 0.94
CCM2-218ENST00000541586 IGKV3-7A0A075B6H7 116 aa20.92■□□□□ 0.94
CCM2-218ENST00000541586 SOCS3O14543 225 aa20.92■□□□□ 0.94
CCM2-218ENST00000541586 LTAP01374 205 aa20.92■□□□□ 0.94
CCM2-218ENST00000541586 ADAMTSL5Q6ZMM2 481 aa20.92■□□□□ 0.94
CCM2-218ENST00000541586 PEMTQ9UBM1 199 aa20.92■□□□□ 0.94
CCM2-218ENST00000541586 SERTM2A0A1B0GWG4 89 aa20.92■□□□□ 0.94
CCM2-218ENST00000541586 OR5I1Q13606 314 aa20.92■□□□□ 0.94
CCM2-218ENST00000541586 PSG3Q16557 428 aa20.92■□□□□ 0.94
CCM2-218ENST00000541586 Q86TA4 180 aa20.92■□□□□ 0.94
CCM2-218ENST00000541586 CTDSP1Q9GZU7 261 aa20.92■□□□□ 0.94
CCM2-218ENST00000541586 IGKV2-40A0A087WW87 121 aaPredicted RBP20.91■□□□□ 0.94
CCM2-218ENST00000541586 IGKV2D-40P01614 121 aaPredicted RBP20.91■□□□□ 0.94
CCM2-218ENST00000541586 MGST1P10620 155 aaKnown RBP20.91■□□□□ 0.94
CCM2-218ENST00000541586 SFRP2Q96HF1 295 aa20.91■□□□□ 0.94
CCM2-218ENST00000541586 TMEM242Q9NWH2 141 aa20.91■□□□□ 0.94
CCM2-218ENST00000541586 TRBV6-1A0A0K0K1D8 114 aa20.9■□□□□ 0.94
CCM2-218ENST00000541586 GCGP01275 180 aa20.9■□□□□ 0.94
CCM2-218ENST00000541586 IGLL1P15814 213 aa20.9■□□□□ 0.94
CCM2-218ENST00000541586 PRNTQ86SH4 94 aa20.9■□□□□ 0.94
CCM2-218ENST00000541586 MRPL53Q96EL3 112 aaKnown RBP20.9■□□□□ 0.94
CCM2-218ENST00000541586 CLEC5AQ9NY25 188 aa20.9■□□□□ 0.94
CCM2-218ENST00000541586 MLXQ9UH92 298 aa20.9■□□□□ 0.94
CCM2-218ENST00000541586 NOTCH3Q9UM47 2321 aa20.9■□□□□ 0.94
CCM2-218ENST00000541586 FLI1Q01543 452 aaPredicted RBP20.9■□□□□ 0.94
CCM2-218ENST00000541586 ANAPC16Q96DE5 110 aa20.9■□□□□ 0.94
CCM2-218ENST00000541586 TUBA4BQ9H853 241 aa20.9■□□□□ 0.94
CCM2-218ENST00000541586 PKD1L1Q8TDX9 2849 aa20.89■□□□□ 0.94
CCM2-218ENST00000541586 PRAC2D3DTV9 90 aa20.89■□□□□ 0.93
CCM2-218ENST00000541586 SAP30O75446 220 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms