RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 UNC79Q9P2D8 2635 aa11.97□□□□□ -0.49
CLPTM1-202ENST00000541297 M0QZ24 198 aa11.97□□□□□ -0.49
CLPTM1-202ENST00000541297 OR2J3O76001 311 aa11.97□□□□□ -0.49
CLPTM1-202ENST00000541297 IGHV4-31P0DP07 118 aa11.97□□□□□ -0.49
CLPTM1-202ENST00000541297 OR2D3Q8NGH3 330 aa11.97□□□□□ -0.49
CLPTM1-202ENST00000541297 S4R3C0 116 aa11.97□□□□□ -0.49
CLPTM1-202ENST00000541297 IGKV1D-37A0A075B6S9 117 aa11.97□□□□□ -0.49
CLPTM1-202ENST00000541297 SRSF8Q9BRL6 282 aaKnown RBP11.97□□□□□ -0.49
CLPTM1-202ENST00000541297 TMEM70Q9BUB7 260 aa11.97□□□□□ -0.49
CLPTM1-202ENST00000541297 MEGF9Q9H1U4 602 aa11.97□□□□□ -0.49
CLPTM1-202ENST00000541297 HECTD1Q9ULT8 2610 aa11.97□□□□□ -0.49
CLPTM1-202ENST00000541297 CBY3A6NI87 242 aa11.96□□□□□ -0.49
CLPTM1-202ENST00000541297 LINC01548A6NM66 108 aa11.96□□□□□ -0.49
CLPTM1-202ENST00000541297 COX7A2P2O60397 106 aa11.96□□□□□ -0.49
CLPTM1-202ENST00000541297 HLA-DRB1P01911 266 aa11.96□□□□□ -0.49
CLPTM1-202ENST00000541297 EGR2P11161 476 aaPredicted RBP11.96□□□□□ -0.49
CLPTM1-202ENST00000541297 PATE2Q6UY27 113 aa11.96□□□□□ -0.49
CLPTM1-202ENST00000541297 OR4C5Q8NGB2 326 aa11.96□□□□□ -0.49
CLPTM1-202ENST00000541297 TLN2Q9Y4G6 2542 aa11.96□□□□□ -0.49
CLPTM1-202ENST00000541297 OR4C46A6NHA9 309 aa11.96□□□□□ -0.49
CLPTM1-202ENST00000541297 H3BUX3 64 aa11.96□□□□□ -0.49
CLPTM1-202ENST00000541297 CRYGCP07315 174 aa11.96□□□□□ -0.49
CLPTM1-202ENST00000541297 FOXA3P55318 350 aaPredicted RBP11.96□□□□□ -0.49
CLPTM1-202ENST00000541297 C10orf113Q5VZT2 155 aa11.96□□□□□ -0.49
CLPTM1-202ENST00000541297 TCF24Q7RTU0 167 aa11.96□□□□□ -0.49
CLPTM1-202ENST00000541297 FASNP49327 2511 aaKnown RBP11.96□□□□□ -0.5
CLPTM1-202ENST00000541297 I3L2K1 104 aa11.95□□□□□ -0.5
CLPTM1-202ENST00000541297 HIST1H1EP10412 219 aaKnown RBP11.95□□□□□ -0.5
CLPTM1-202ENST00000541297 CDKN1BP46527 198 aa11.95□□□□□ -0.5
CLPTM1-202ENST00000541297 ECSCRQ19T08 205 aa11.95□□□□□ -0.5
CLPTM1-202ENST00000541297 MPV17L2Q567V2 206 aa11.95□□□□□ -0.5
CLPTM1-202ENST00000541297 LINC00173Q6ZV60 143 aa11.95□□□□□ -0.5
CLPTM1-202ENST00000541297 C5orf56Q8N8D9 126 aa11.95□□□□□ -0.5
CLPTM1-202ENST00000541297 WFDC11Q8NEX6 87 aa11.95□□□□□ -0.5
CLPTM1-202ENST00000541297 FLNAP21333 2647 aaKnown RBP11.95□□□□□ -0.5
CLPTM1-202ENST00000541297 TCRBV4S1A1TA0A5B7 111 aa11.95□□□□□ -0.5
CLPTM1-202ENST00000541297 ATP6V0E1O15342 81 aa11.95□□□□□ -0.5
CLPTM1-202ENST00000541297 BCL6BQ8N143 479 aaPredicted RBP11.95□□□□□ -0.5
CLPTM1-202ENST00000541297 AKAP9Q99996 3911 aa11.95□□□□□ -0.5
CLPTM1-202ENST00000541297 A0A1B0GXF2 115 aa11.95□□□□□ -0.5
CLPTM1-202ENST00000541297 VAMP3Q15836 100 aa11.95□□□□□ -0.5
CLPTM1-202ENST00000541297 THAP8Q8NA92 274 aa11.95□□□□□ -0.5
CLPTM1-202ENST00000541297 FXYD5Q96DB9 178 aa11.95□□□□□ -0.5
CLPTM1-202ENST00000541297 TMUB1Q9BVT8 246 aa11.95□□□□□ -0.5
CLPTM1-202ENST00000541297 hDV102S1A0JD36 115 aa11.94□□□□□ -0.5
CLPTM1-202ENST00000541297 TMEM116Q8NCL8 245 aa11.94□□□□□ -0.5
CLPTM1-202ENST00000541297 MOB4Q9Y3A3 225 aa11.94□□□□□ -0.5
CLPTM1-202ENST00000541297 NPIPB5A8MRT5 1133 aa11.94□□□□□ -0.5
CLPTM1-202ENST00000541297 K7EIM0 57 aa11.94□□□□□ -0.5
CLPTM1-202ENST00000541297 C16orf54Q6UWD8 224 aa11.94□□□□□ -0.5
CLPTM1-202ENST00000541297 CIARTQ8N365 385 aaPredicted RBP11.94□□□□□ -0.5
CLPTM1-202ENST00000541297 FANCD2OSQ96PS1 177 aa11.94□□□□□ -0.5
CLPTM1-202ENST00000541297 CHRDL1Q9BU40 450 aa11.94□□□□□ -0.5
CLPTM1-202ENST00000541297 LINC00322Q6ZN03 302 aaPredicted RBP11.93□□□□□ -0.5
CLPTM1-202ENST00000541297 ATP5L2Q7Z4Y8 100 aa11.93□□□□□ -0.5
CLPTM1-202ENST00000541297 TTC9CQ8N5M4 171 aa11.93□□□□□ -0.5
CLPTM1-202ENST00000541297 BLNKQ8WV28 456 aa11.93□□□□□ -0.5
CLPTM1-202ENST00000541297 RPH3ALQ9UNE2 315 aa11.93□□□□□ -0.5
CLPTM1-202ENST00000541297 IGHV1-24A0A0C4DH33 117 aa11.93□□□□□ -0.5
CLPTM1-202ENST00000541297 G3V318 75 aa11.93□□□□□ -0.5
CLPTM1-202ENST00000541297 PRSS57Q6UWY2 283 aa11.93□□□□□ -0.5
CLPTM1-202ENST00000541297 OR1L4Q8NGR5 311 aa11.93□□□□□ -0.5
CLPTM1-202ENST00000541297 LINC00527Q9UJ94 153 aa11.93□□□□□ -0.5
CLPTM1-202ENST00000541297 IGLV11-55A0A075B6I3 123 aa11.92□□□□□ -0.5
CLPTM1-202ENST00000541297 SYS1-DBNDD2H3BUS1 97 aa11.92□□□□□ -0.5
CLPTM1-202ENST00000541297 J3QLI3 93 aa11.92□□□□□ -0.5
CLPTM1-202ENST00000541297 SMAD7O15105 426 aaKnown RBP11.92□□□□□ -0.5
CLPTM1-202ENST00000541297 HBBP68871 147 aa11.92□□□□□ -0.5
CLPTM1-202ENST00000541297 EPDR1Q9UM22 224 aa11.92□□□□□ -0.5
CLPTM1-202ENST00000541297 RNF24Q9Y225 148 aa11.92□□□□□ -0.5
CLPTM1-202ENST00000541297 CRXO43186 299 aaPredicted RBP11.92□□□□□ -0.5
CLPTM1-202ENST00000541297 NUDT3O95989 172 aa11.92□□□□□ -0.5
CLPTM1-202ENST00000541297 IGHV3-23P01764 117 aa11.92□□□□□ -0.5
CLPTM1-202ENST00000541297 SLC25A5P05141 298 aaKnown RBP11.92□□□□□ -0.5
CLPTM1-202ENST00000541297 MYCNOSP40205 109 aa11.92□□□□□ -0.5
CLPTM1-202ENST00000541297 DEFB112Q30KQ8 113 aa11.92□□□□□ -0.5
CLPTM1-202ENST00000541297 LINC00305Q7Z4B0 112 aa11.92□□□□□ -0.5
CLPTM1-202ENST00000541297 ST20Q9HBF5 79 aa11.92□□□□□ -0.5
CLPTM1-202ENST00000541297 TRAV30A0A087WSZ9 112 aa11.91□□□□□ -0.5
CLPTM1-202ENST00000541297 TAX1BP3O14907 124 aa11.91□□□□□ -0.5
CLPTM1-202ENST00000541297 ORM2P19652 201 aa11.91□□□□□ -0.5
CLPTM1-202ENST00000541297 GTSF1Q8WW33 167 aa11.91□□□□□ -0.5
CLPTM1-202ENST00000541297 PGLYRP4Q96LB8 373 aa11.91□□□□□ -0.5
CLPTM1-202ENST00000541297 PGPA6NDG6 321 aa11.91□□□□□ -0.5
CLPTM1-202ENST00000541297 LEPROTL1O95214 131 aa11.91□□□□□ -0.5
CLPTM1-202ENST00000541297 SVIPQ8NHG7 77 aa11.91□□□□□ -0.5
CLPTM1-202ENST00000541297 MCRIP2Q9BUT9 160 aaKnown RBP11.91□□□□□ -0.5
CLPTM1-202ENST00000541297 IGLC1P0CG04 106 aa11.9□□□□□ -0.5
CLPTM1-202ENST00000541297 OR1B1Q8NGR6 318 aa11.9□□□□□ -0.5
CLPTM1-202ENST00000541297 TRGV9Q99603 122 aa11.9□□□□□ -0.5
CLPTM1-202ENST00000541297 RPP21Q9H633 154 aaKnown RBP11.9□□□□□ -0.5
CLPTM1-202ENST00000541297 BVES-AS1Q5T3Y7 98 aa11.9□□□□□ -0.5
CLPTM1-202ENST00000541297 GPR82Q96P67 336 aa11.9□□□□□ -0.5
CLPTM1-202ENST00000541297 A6NDX4 124 aa11.89□□□□□ -0.51
CLPTM1-202ENST00000541297 OR2T8A6NH00 312 aa11.89□□□□□ -0.51
CLPTM1-202ENST00000541297 ZNF138P52744 262 aa11.89□□□□□ -0.51
CLPTM1-202ENST00000541297 MLST8Q9BVC4 326 aa11.89□□□□□ -0.51
CLPTM1-202ENST00000541297 LOC102724200A0A096LPH7 203 aaPredicted RBP11.89□□□□□ -0.51
CLPTM1-202ENST00000541297 MUC21A0A0G2JKD1 596 aa11.89□□□□□ -0.51
CLPTM1-202ENST00000541297 MUC21A0A140T8X8 626 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms