RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 CLEC5AQ9NY25 188 aa10.35□□□□□ -0.75
LTBR-209ENST00000541102 SACSQ9NZJ4 4579 aa10.34□□□□□ -0.75
LTBR-209ENST00000541102 A0A1W2PPV4 95 aa10.34□□□□□ -0.75
LTBR-209ENST00000541102 NUPR2A6NF83 97 aa10.34□□□□□ -0.75
LTBR-209ENST00000541102 PRAC2D3DTV9 90 aa10.34□□□□□ -0.75
LTBR-209ENST00000541102 NBEAP1P0C6P0 100 aa10.34□□□□□ -0.75
LTBR-209ENST00000541102 CDC34P49427 236 aaPredicted RBP10.34□□□□□ -0.75
LTBR-209ENST00000541102 NANOS2P60321 138 aaKnown RBP10.34□□□□□ -0.75
LTBR-209ENST00000541102 CEMP1Q6PRD7 247 aaPredicted RBP10.34□□□□□ -0.75
LTBR-209ENST00000541102 LCN15Q6UWW0 184 aa10.34□□□□□ -0.75
LTBR-209ENST00000541102 BAP18Q8IXM2 172 aa10.34□□□□□ -0.75
LTBR-209ENST00000541102 EXOC3-AS1Q8N2X6 119 aa10.34□□□□□ -0.75
LTBR-209ENST00000541102 STOML3Q8TAV4 291 aa10.34□□□□□ -0.75
LTBR-209ENST00000541102 C11orf45Q8TAV5 145 aa10.34□□□□□ -0.75
LTBR-209ENST00000541102 LRRC20Q8TCA0 184 aa10.34□□□□□ -0.75
LTBR-209ENST00000541102 TMED6Q8WW62 240 aa10.34□□□□□ -0.75
LTBR-209ENST00000541102 PHYHIPLQ96FC7 376 aa10.34□□□□□ -0.75
LTBR-209ENST00000541102 RNF24Q9Y225 148 aa10.34□□□□□ -0.75
LTBR-209ENST00000541102 RYR2Q92736 4967 aa10.34□□□□□ -0.75
LTBR-209ENST00000541102 H3BMM0 161 aa10.33□□□□□ -0.76
LTBR-209ENST00000541102 IGKV3-20P01619 116 aa10.33□□□□□ -0.76
LTBR-209ENST00000541102 ARL14EPLP0DKL9 152 aa10.33□□□□□ -0.76
LTBR-209ENST00000541102 PSG3Q16557 428 aa10.33□□□□□ -0.76
LTBR-209ENST00000541102 KHDC3LQ587J8 217 aa10.33□□□□□ -0.76
LTBR-209ENST00000541102 SAV1Q9H4B6 383 aaPredicted RBP10.33□□□□□ -0.76
LTBR-209ENST00000541102 XCL2Q9UBD3 114 aa10.33□□□□□ -0.76
LTBR-209ENST00000541102 A0A0J9YX75 114 aa10.32□□□□□ -0.76
LTBR-209ENST00000541102 BOLA2-SMG1P6H3BVE0 249 aa10.32□□□□□ -0.76
LTBR-209ENST00000541102 M0R3E3 92 aa10.32□□□□□ -0.76
LTBR-209ENST00000541102 MBP02144 154 aa10.32□□□□□ -0.76
LTBR-209ENST00000541102 SEC11BP0C7V7 166 aa10.32□□□□□ -0.76
LTBR-209ENST00000541102 STAG3L2P0CL84 134 aa10.32□□□□□ -0.76
LTBR-209ENST00000541102 STAG3L3P0CL85 134 aa10.32□□□□□ -0.76
LTBR-209ENST00000541102 HLA-DRB4P13762 266 aa10.32□□□□□ -0.76
LTBR-209ENST00000541102 NUTF2P61970 127 aaKnown RBP10.32□□□□□ -0.76
LTBR-209ENST00000541102 UBE2L3P68036 154 aaKnown RBP10.32□□□□□ -0.76
LTBR-209ENST00000541102 GUK1Q16774 197 aa10.32□□□□□ -0.76
LTBR-209ENST00000541102 AKR1C8PQ5T2L2 129 aa10.32□□□□□ -0.76
LTBR-209ENST00000541102 ZNF738Q8NE65 137 aa10.32□□□□□ -0.76
LTBR-209ENST00000541102 PHLDA1Q8WV24 401 aaPredicted RBP10.32□□□□□ -0.76
LTBR-209ENST00000541102 SLC50A1Q9BRV3 221 aa10.32□□□□□ -0.76
LTBR-209ENST00000541102 ACTR3CQ9C0K3 210 aaPredicted RBP10.32□□□□□ -0.76
LTBR-209ENST00000541102 C11orf68Q9H3H3 251 aaKnown RBP10.32□□□□□ -0.76
LTBR-209ENST00000541102 TMPRSS5Q9H3S3 457 aa10.32□□□□□ -0.76
LTBR-209ENST00000541102 KLK5Q9Y337 293 aaPredicted RBP10.32□□□□□ -0.76
LTBR-209ENST00000541102 HLA-DRB4X5D2U9 266 aa10.32□□□□□ -0.76
LTBR-209ENST00000541102 IGHV4-28A0A0C4DH34 117 aa10.31□□□□□ -0.76
LTBR-209ENST00000541102 TPT1P13693 172 aaKnown RBP10.31□□□□□ -0.76
LTBR-209ENST00000541102 GCHFRP30047 84 aa10.31□□□□□ -0.76
LTBR-209ENST00000541102 FGF8P55075 233 aaPredicted RBP10.31□□□□□ -0.76
LTBR-209ENST00000541102 FXYD7P58549 80 aa10.31□□□□□ -0.76
LTBR-209ENST00000541102 TAS2R45P59539 299 aa10.31□□□□□ -0.76
LTBR-209ENST00000541102 FOXI2Q6ZQN5 318 aa10.31□□□□□ -0.76
LTBR-209ENST00000541102 OR4B1Q8NGF8 309 aa10.31□□□□□ -0.76
LTBR-209ENST00000541102 RPUSD4Q96CM3 377 aaKnown RBP10.31□□□□□ -0.76
LTBR-209ENST00000541102 ZNF253O75346 499 aa10.3□□□□□ -0.76
LTBR-209ENST00000541102 RBMY1A1P0DJD3 496 aaKnown RBP10.3□□□□□ -0.76
LTBR-209ENST00000541102 RBMY1CP0DJD4 496 aa10.3□□□□□ -0.76
LTBR-209ENST00000541102 RANP62826 216 aaKnown RBP10.3□□□□□ -0.76
LTBR-209ENST00000541102 ICAM4Q14773 271 aa10.3□□□□□ -0.76
LTBR-209ENST00000541102 RBMY1FQ15415 496 aaKnown RBP10.3□□□□□ -0.76
LTBR-209ENST00000541102 SAMD13Q5VXD3 122 aa10.3□□□□□ -0.76
LTBR-209ENST00000541102 PQLC2Q6ZP29 291 aa10.3□□□□□ -0.76
LTBR-209ENST00000541102 Q8NAQ8 132 aa10.3□□□□□ -0.76
LTBR-209ENST00000541102 CSNK1G2-AS1Q8NCQ2 148 aa10.3□□□□□ -0.76
LTBR-209ENST00000541102 C1QTNF4Q9BXJ3 329 aa10.3□□□□□ -0.76
LTBR-209ENST00000541102 X6R8D5 127 aa10.3□□□□□ -0.76
LTBR-209ENST00000541102 CTXND1A0A1B0GTU2 59 aa10.29□□□□□ -0.76
LTBR-209ENST00000541102 ZNF705EA8MWA4 302 aaPredicted RBP10.29□□□□□ -0.76
LTBR-209ENST00000541102 LY6G6CO95867 125 aa10.29□□□□□ -0.76
LTBR-209ENST00000541102 MIFP14174 115 aa10.29□□□□□ -0.76
LTBR-209ENST00000541102 CNN1P51911 297 aaKnown RBP10.29□□□□□ -0.76
LTBR-209ENST00000541102 PDE6HQ13956 83 aa10.29□□□□□ -0.76
LTBR-209ENST00000541102 FAM74A1Q5RGS3 127 aa10.29□□□□□ -0.76
LTBR-209ENST00000541102 EBLN2Q6P2I7 272 aa10.29□□□□□ -0.76
LTBR-209ENST00000541102 AMTNQ6UX39 209 aa10.29□□□□□ -0.76
LTBR-209ENST00000541102 SLC51BQ86UW2 128 aa10.29□□□□□ -0.76
LTBR-209ENST00000541102 OR8A1Q8NGG7 326 aa10.29□□□□□ -0.76
LTBR-209ENST00000541102 FAM213BQ8TBF2 198 aa10.29□□□□□ -0.76
LTBR-209ENST00000541102 SUN5Q8TC36 379 aa10.29□□□□□ -0.76
LTBR-209ENST00000541102 LYSTQ99698 3801 aa10.29□□□□□ -0.76
LTBR-209ENST00000541102 SLC35B3Q9H1N7 401 aa10.29□□□□□ -0.76
LTBR-209ENST00000541102 Q9H3A6 140 aa10.29□□□□□ -0.76
LTBR-209ENST00000541102 DNAH1Q9P2D7 4330 aa10.29□□□□□ -0.76
LTBR-209ENST00000541102 A8MTW9 85 aa10.28□□□□□ -0.76
LTBR-209ENST00000541102 EIF5AP63241 154 aaKnown RBP10.28□□□□□ -0.76
LTBR-209ENST00000541102 HIST1H1AQ02539 215 aaPredicted RBP10.28□□□□□ -0.76
LTBR-209ENST00000541102 ERCC8Q13216 396 aa10.28□□□□□ -0.76
LTBR-209ENST00000541102 PLECQ15149 4684 aaKnown RBP10.28□□□□□ -0.76
LTBR-209ENST00000541102 ALMS1Q8TCU4 4167 aa10.27□□□□□ -0.77
LTBR-209ENST00000541102 IGHV3OR16-12A0A075B7B8 117 aa10.27□□□□□ -0.77
LTBR-209ENST00000541102 A0A1B0GV50 99 aa10.27□□□□□ -0.77
LTBR-209ENST00000541102 MAP1LC3B2A6NCE7 125 aa10.27□□□□□ -0.77
LTBR-209ENST00000541102 CXorf1O96002 111 aa10.27□□□□□ -0.77
LTBR-209ENST00000541102 PSG9Q00887 426 aa10.27□□□□□ -0.77
LTBR-209ENST00000541102 LINC00476Q8WZB0 136 aa10.27□□□□□ -0.77
LTBR-209ENST00000541102 MAP1LC3BQ9GZQ8 125 aa10.27□□□□□ -0.77
LTBR-209ENST00000541102 YTHDF2Q9Y5A9 579 aaKnown RBP10.27□□□□□ -0.77
LTBR-209ENST00000541102 IGKV2-40A0A087WW87 121 aaPredicted RBP10.26□□□□□ -0.77
LTBR-209ENST00000541102 UMAD1C9J7I0 102 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms