RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 BAP18Q8IXM2 172 aa14.23□□□□□ -0.13
DDX55-207ENST00000540763 OR8A1Q8NGG7 326 aa14.23□□□□□ -0.13
DDX55-207ENST00000540763 BLNKQ8WV28 456 aa14.23□□□□□ -0.13
DDX55-207ENST00000540763 RNF183Q96D59 192 aa14.23□□□□□ -0.13
DDX55-207ENST00000540763 OVOL2Q9BRP0 275 aa14.23□□□□□ -0.13
DDX55-207ENST00000540763 CTXND1A0A1B0GTU2 59 aa14.22□□□□□ -0.13
DDX55-207ENST00000540763 C4BPBP20851 252 aa14.22□□□□□ -0.13
DDX55-207ENST00000540763 CD300CQ08708 224 aa14.22□□□□□ -0.13
DDX55-207ENST00000540763 DEFB135Q30KP9 77 aa14.22□□□□□ -0.13
DDX55-207ENST00000540763 UMAD1C9J7I0 102 aa14.21□□□□□ -0.13
DDX55-207ENST00000540763 SPRY2O43597 315 aa14.21□□□□□ -0.13
DDX55-207ENST00000540763 CXorf1O96002 111 aa14.21□□□□□ -0.13
DDX55-207ENST00000540763 GIG44P09565 113 aaPredicted RBP14.21□□□□□ -0.13
DDX55-207ENST00000540763 ARL14EPLP0DKL9 152 aa14.21□□□□□ -0.13
DDX55-207ENST00000540763 CNN1P51911 297 aaKnown RBP14.21□□□□□ -0.13
DDX55-207ENST00000540763 OR4B1Q8NGF8 309 aa14.21□□□□□ -0.13
DDX55-207ENST00000540763 SUN5Q8TC36 379 aa14.21□□□□□ -0.13
DDX55-207ENST00000540763 PHYHIPLQ96FC7 376 aa14.21□□□□□ -0.13
DDX55-207ENST00000540763 TENM3Q9P273 2699 aa14.2□□□□□ -0.14
DDX55-207ENST00000540763 AMTNQ6UX39 209 aa14.2□□□□□ -0.14
DDX55-207ENST00000540763 C9orf62Q8N4C0 152 aa14.2□□□□□ -0.14
DDX55-207ENST00000540763 RETNQ9HD89 108 aa14.2□□□□□ -0.14
DDX55-207ENST00000540763 AMBPP02760 352 aa14.19□□□□□ -0.14
DDX55-207ENST00000540763 HIST1H1AQ02539 215 aaPredicted RBP14.19□□□□□ -0.14
DDX55-207ENST00000540763 ZNF726P1Q15940 193 aa14.19□□□□□ -0.14
DDX55-207ENST00000540763 EIF5AL1Q6IS14 154 aaKnown RBP14.19□□□□□ -0.14
DDX55-207ENST00000540763 DPPA3Q6W0C5 159 aa14.19□□□□□ -0.14
DDX55-207ENST00000540763 SLC51BQ86UW2 128 aa14.19□□□□□ -0.14
DDX55-207ENST00000540763 OR10J6PQ8NGY7 276 aa14.19□□□□□ -0.14
DDX55-207ENST00000540763 TMEM167BQ9NRX6 74 aa14.19□□□□□ -0.14
DDX55-207ENST00000540763 HUWE1Q7Z6Z7 4374 aaKnown RBP14.18□□□□□ -0.14
DDX55-207ENST00000540763 ZNF705FA8MVS1 300 aaPredicted RBP14.18□□□□□ -0.14
DDX55-207ENST00000540763 HMGB3O15347 200 aaKnown RBP14.18□□□□□ -0.14
DDX55-207ENST00000540763 GCHFRP30047 84 aa14.18□□□□□ -0.14
DDX55-207ENST00000540763 ICAM4Q14773 271 aa14.18□□□□□ -0.14
DDX55-207ENST00000540763 EXOC3-AS1Q8N2X6 119 aa14.18□□□□□ -0.14
DDX55-207ENST00000540763 ARL6IP6Q8N6S5 226 aa14.18□□□□□ -0.14
DDX55-207ENST00000540763 CSNK1G2-AS1Q8NCQ2 148 aa14.18□□□□□ -0.14
DDX55-207ENST00000540763 Q9H3A6 140 aa14.18□□□□□ -0.14
DDX55-207ENST00000540763 M0R3E3 92 aa14.17□□□□□ -0.14
DDX55-207ENST00000540763 EIF3GO75821 320 aaKnown RBP eCLIP14.17□□□□□ -0.14
DDX55-207ENST00000540763 IGKV3-20P01619 116 aa14.17□□□□□ -0.14
DDX55-207ENST00000540763 FAM74A1Q5RGS3 127 aa14.17□□□□□ -0.14
DDX55-207ENST00000540763 SSX7Q7RTT5 188 aa14.17□□□□□ -0.14
DDX55-207ENST00000540763 WWC2-AS2Q96NR7 200 aa14.17□□□□□ -0.14
DDX55-207ENST00000540763 ODF3Q96PU9 254 aa14.17□□□□□ -0.14
DDX55-207ENST00000540763 OTORQ9NRC9 128 aa14.17□□□□□ -0.14
DDX55-207ENST00000540763 NPIPB6E9PJ23 425 aa14.16□□□□□ -0.14
DDX55-207ENST00000540763 BOLA2-SMG1P6H3BVE0 249 aa14.16□□□□□ -0.14
DDX55-207ENST00000540763 ZNF705DP0CH99 300 aaPredicted RBP14.16□□□□□ -0.14
DDX55-207ENST00000540763 ZNF705BP0CI00 300 aaPredicted RBP14.16□□□□□ -0.14
DDX55-207ENST00000540763 RANP62826 216 aaKnown RBP14.16□□□□□ -0.14
DDX55-207ENST00000540763 RXFP4Q8TDU9 374 aa14.16□□□□□ -0.14
DDX55-207ENST00000540763 SLC35B3Q9H1N7 401 aa14.16□□□□□ -0.14
DDX55-207ENST00000540763 KMT2CQ8NEZ4 4911 aaKnown RBP14.15□□□□□ -0.14
DDX55-207ENST00000540763 PRAC2D3DTV9 90 aa14.15□□□□□ -0.14
DDX55-207ENST00000540763 CSN1S1P47710 185 aa14.15□□□□□ -0.14
DDX55-207ENST00000540763 RAB5CP51148 216 aa14.15□□□□□ -0.14
DDX55-207ENST00000540763 TMED6Q8WW62 240 aa14.15□□□□□ -0.14
DDX55-207ENST00000540763 XCL2Q9UBD3 114 aa14.15□□□□□ -0.14
DDX55-207ENST00000540763 RBAKDNA6NC62 111 aa14.14□□□□□ -0.15
DDX55-207ENST00000540763 MAP1LC3B2A6NCE7 125 aa14.14□□□□□ -0.15
DDX55-207ENST00000540763 ZNF705EA8MWA4 302 aaPredicted RBP14.14□□□□□ -0.15
DDX55-207ENST00000540763 SLC25A5P05141 298 aaKnown RBP14.14□□□□□ -0.15
DDX55-207ENST00000540763 RARRES2Q99969 163 aa14.14□□□□□ -0.15
DDX55-207ENST00000540763 MAP1LC3BQ9GZQ8 125 aa14.14□□□□□ -0.15
DDX55-207ENST00000540763 EDA2RQ9HAV5 297 aa14.14□□□□□ -0.15
DDX55-207ENST00000540763 PLA2G2EQ9NZK7 142 aa14.14□□□□□ -0.15
DDX55-207ENST00000540763 ZNF705AQ6ZN79 300 aaPredicted RBP14.13□□□□□ -0.15
DDX55-207ENST00000540763 C9orf47Q6ZRZ4 202 aa14.13□□□□□ -0.15
DDX55-207ENST00000540763 OR11H2Q8NH07 326 aa14.13□□□□□ -0.15
DDX55-207ENST00000540763 IGF2BP2-AS1Q96M15 143 aa14.13□□□□□ -0.15
DDX55-207ENST00000540763 LINC00477Q96M19 166 aa14.13□□□□□ -0.15
DDX55-207ENST00000540763 PPP1R14DQ9NXH3 145 aa14.13□□□□□ -0.15
DDX55-207ENST00000540763 A0A1W2PRE2 83 aa14.12□□□□□ -0.15
DDX55-207ENST00000540763 PGPA6NDG6 321 aa14.12□□□□□ -0.15
DDX55-207ENST00000540763 TSPOP30536 169 aa14.12□□□□□ -0.15
DDX55-207ENST00000540763 CDKN1BP46527 198 aa14.12□□□□□ -0.15
DDX55-207ENST00000540763 SPINK13Q1W4C9 94 aa14.12□□□□□ -0.15
DDX55-207ENST00000540763 MBD3L1Q8WWY6 194 aa14.12□□□□□ -0.15
DDX55-207ENST00000540763 NEU1Q99519 415 aa14.12□□□□□ -0.15
DDX55-207ENST00000540763 TRBV7-9A0A0J9YWB2 115 aa14.11□□□□□ -0.15
DDX55-207ENST00000540763 CRXO43186 299 aaPredicted RBP14.11□□□□□ -0.15
DDX55-207ENST00000540763 INSP01308 110 aa14.11□□□□□ -0.15
DDX55-207ENST00000540763 MIFP14174 115 aa14.11□□□□□ -0.15
DDX55-207ENST00000540763 FHITP49789 147 aa14.11□□□□□ -0.15
DDX55-207ENST00000540763 FXYD7P58549 80 aa14.11□□□□□ -0.15
DDX55-207ENST00000540763 CMTM2Q8TAZ6 248 aa14.11□□□□□ -0.15
DDX55-207ENST00000540763 FAM213BQ8TBF2 198 aa14.11□□□□□ -0.15
DDX55-207ENST00000540763 C11orf68Q9H3H3 251 aaKnown RBP14.11□□□□□ -0.15
DDX55-207ENST00000540763 GOLT1BQ9Y3E0 138 aa14.11□□□□□ -0.15
DDX55-207ENST00000540763 ARL2-SNX15V9GYD0 113 aa14.11□□□□□ -0.15
DDX55-207ENST00000540763 SERTM2A0A1B0GWG4 89 aa14.1□□□□□ -0.15
DDX55-207ENST00000540763 DIRC3C9JPN6 131 aa14.1□□□□□ -0.15
DDX55-207ENST00000540763 M0R2Z0 102 aa14.1□□□□□ -0.15
DDX55-207ENST00000540763 SULT1A2P50226 295 aa14.1□□□□□ -0.15
DDX55-207ENST00000540763 TMEM78Q5T7P6 136 aa14.1□□□□□ -0.15
DDX55-207ENST00000540763 C5orf17Q8NAS9 161 aa14.1□□□□□ -0.15
DDX55-207ENST00000540763 C20orf144Q9BQM9 153 aa14.1□□□□□ -0.15
DDX55-207ENST00000540763 NKX6-2Q9C056 277 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms