RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 RHOBP62745 196 aa13.16□□□□□ -0.3
SNRPA1-203ENST00000540017 CEMP1Q6PRD7 247 aaPredicted RBP13.16□□□□□ -0.3
SNRPA1-203ENST00000540017 PHLDA1Q8WV24 401 aaPredicted RBP13.16□□□□□ -0.3
SNRPA1-203ENST00000540017 FXYD5Q96DB9 178 aa13.16□□□□□ -0.3
SNRPA1-203ENST00000540017 OR51M1Q9H341 326 aa13.16□□□□□ -0.3
SNRPA1-203ENST00000540017 LCE6AA0A183 80 aa13.15□□□□□ -0.3
SNRPA1-203ENST00000540017 PDE6HQ13956 83 aa13.15□□□□□ -0.3
SNRPA1-203ENST00000540017 EXOC3-AS1Q8N2X6 119 aa13.15□□□□□ -0.3
SNRPA1-203ENST00000540017 PAXXQ9BUH6 204 aa13.15□□□□□ -0.3
SNRPA1-203ENST00000540017 TNFSF18Q9UNG2 199 aa13.15□□□□□ -0.3
SNRPA1-203ENST00000540017 GOLT1BQ9Y3E0 138 aa13.15□□□□□ -0.3
SNRPA1-203ENST00000540017 TIMM9Q9Y5J7 89 aa13.15□□□□□ -0.3
SNRPA1-203ENST00000540017 NUPR2A6NF83 97 aa13.14□□□□□ -0.31
SNRPA1-203ENST00000540017 AMBPP02760 352 aa13.14□□□□□ -0.31
SNRPA1-203ENST00000540017 PRM2P04554 102 aa13.14□□□□□ -0.31
SNRPA1-203ENST00000540017 NBEAP1P0C6P0 100 aa13.14□□□□□ -0.31
SNRPA1-203ENST00000540017 RAB2AP61019 212 aa13.14□□□□□ -0.31
SNRPA1-203ENST00000540017 KIR3DS1Q14943 382 aa13.14□□□□□ -0.31
SNRPA1-203ENST00000540017 HSD17B11Q8NBQ5 300 aa13.14□□□□□ -0.31
SNRPA1-203ENST00000540017 RNF141Q8WVD5 230 aa13.14□□□□□ -0.31
SNRPA1-203ENST00000540017 SMIM9A6NGZ8 99 aa13.13□□□□□ -0.31
SNRPA1-203ENST00000540017 SMLR1H3BR10 107 aa13.13□□□□□ -0.31
SNRPA1-203ENST00000540017 OR7C2O60412 319 aa13.13□□□□□ -0.31
SNRPA1-203ENST00000540017 INO80EQ8NBZ0 244 aaPredicted RBP13.13□□□□□ -0.31
SNRPA1-203ENST00000540017 OR10J6PQ8NGY7 276 aa13.13□□□□□ -0.31
SNRPA1-203ENST00000540017 PHYHIPLQ96FC7 376 aa13.13□□□□□ -0.31
SNRPA1-203ENST00000540017 PPP1R14DQ9NXH3 145 aa13.13□□□□□ -0.31
SNRPA1-203ENST00000540017 DNAH1Q9P2D7 4330 aa13.12□□□□□ -0.31
SNRPA1-203ENST00000540017 NPIPB6E9PJ23 425 aa13.12□□□□□ -0.31
SNRPA1-203ENST00000540017 INSP01308 110 aa13.12□□□□□ -0.31
SNRPA1-203ENST00000540017 CT45A10P0DMU9 189 aa13.12□□□□□ -0.31
SNRPA1-203ENST00000540017 M6PRP20645 277 aa13.12□□□□□ -0.31
SNRPA1-203ENST00000540017 ZNF266Q14584 549 aa13.12□□□□□ -0.31
SNRPA1-203ENST00000540017 ICAM4Q14773 271 aa13.12□□□□□ -0.31
SNRPA1-203ENST00000540017 ZNF767PQ75MW2 155 aa13.12□□□□□ -0.31
SNRPA1-203ENST00000540017 RPP25LQ8N5L8 163 aaKnown RBP13.12□□□□□ -0.31
SNRPA1-203ENST00000540017 MRPL53Q96EL3 112 aaKnown RBP13.12□□□□□ -0.31
SNRPA1-203ENST00000540017 ATP6V0CP27449 155 aa13.11□□□□□ -0.31
SNRPA1-203ENST00000540017 EMP1P54849 157 aa13.11□□□□□ -0.31
SNRPA1-203ENST00000540017 ERCC8Q13216 396 aa13.11□□□□□ -0.31
SNRPA1-203ENST00000540017 ACOT6Q3I5F7 207 aaPredicted RBP13.11□□□□□ -0.31
SNRPA1-203ENST00000540017 RPL7L1Q6DKI1 246 aaKnown RBP13.11□□□□□ -0.31
SNRPA1-203ENST00000540017 TMEM208Q9BTX3 173 aa13.11□□□□□ -0.31
SNRPA1-203ENST00000540017 SH3BGRL3Q9H299 93 aa13.11□□□□□ -0.31
SNRPA1-203ENST00000540017 PRELID1Q9Y255 219 aa13.11□□□□□ -0.31
SNRPA1-203ENST00000540017 ZNF705GA8MUZ8 300 aaPredicted RBP13.1□□□□□ -0.31
SNRPA1-203ENST00000540017 HBE1P02100 147 aa13.1□□□□□ -0.31
SNRPA1-203ENST00000540017 CDKN1BP46527 198 aa13.1□□□□□ -0.31
SNRPA1-203ENST00000540017 C12orf74Q32Q52 190 aa13.1□□□□□ -0.31
SNRPA1-203ENST00000540017 KHDC3LQ587J8 217 aa13.1□□□□□ -0.31
SNRPA1-203ENST00000540017 FAM122CQ6P4D5 195 aa13.1□□□□□ -0.31
SNRPA1-203ENST00000540017 Q6ZTC4 211 aa13.1□□□□□ -0.31
SNRPA1-203ENST00000540017 OR2G3Q8NGZ4 309 aa13.1□□□□□ -0.31
SNRPA1-203ENST00000540017 HYDINQ4G0P3 5121 aa13.1□□□□□ -0.31
SNRPA1-203ENST00000540017 ALMS1Q8TCU4 4167 aa13.09□□□□□ -0.31
SNRPA1-203ENST00000540017 LOC102723971A0A1B0GUV8 181 aa13.09□□□□□ -0.31
SNRPA1-203ENST00000540017 UBE2L3P68036 154 aaKnown RBP13.09□□□□□ -0.31
SNRPA1-203ENST00000540017 RRN3P1Q2M238 152 aa13.09□□□□□ -0.31
SNRPA1-203ENST00000540017 OR10G4Q8NGN3 311 aa13.09□□□□□ -0.31
SNRPA1-203ENST00000540017 OR10G9Q8NGN4 311 aa13.09□□□□□ -0.31
SNRPA1-203ENST00000540017 OR10G7Q8NGN6 311 aa13.09□□□□□ -0.31
SNRPA1-203ENST00000540017 PSMG3Q9BT73 122 aaPredicted RBP13.09□□□□□ -0.31
SNRPA1-203ENST00000540017 AAMDCQ9H7C9 122 aa13.09□□□□□ -0.31
SNRPA1-203ENST00000540017 IGKV2-40A0A087WW87 121 aaPredicted RBP13.08□□□□□ -0.32
SNRPA1-203ENST00000540017 TMEM189A5PLL7 270 aa13.08□□□□□ -0.32
SNRPA1-203ENST00000540017 HMGB3O15347 200 aaKnown RBP13.08□□□□□ -0.32
SNRPA1-203ENST00000540017 ARPC5O15511 151 aa13.08□□□□□ -0.32
SNRPA1-203ENST00000540017 IGKV2D-40P01614 121 aaPredicted RBP13.08□□□□□ -0.32
SNRPA1-203ENST00000540017 AZU1P20160 251 aa13.08□□□□□ -0.32
SNRPA1-203ENST00000540017 TAS2R45P59539 299 aa13.08□□□□□ -0.32
SNRPA1-203ENST00000540017 RANP62826 216 aaKnown RBP13.08□□□□□ -0.32
SNRPA1-203ENST00000540017 AGPAT4-IT1Q9H0P7 198 aa13.08□□□□□ -0.32
SNRPA1-203ENST00000540017 PLA2G2EQ9NZK7 142 aa13.08□□□□□ -0.32
SNRPA1-203ENST00000540017 KLK5Q9Y337 293 aaPredicted RBP13.08□□□□□ -0.32
SNRPA1-203ENST00000540017 A0A1W2PPV4 95 aa13.07□□□□□ -0.32
SNRPA1-203ENST00000540017 J3KRW8 73 aa13.07□□□□□ -0.32
SNRPA1-203ENST00000540017 FAM222AQ5U5X8 452 aa13.07□□□□□ -0.32
SNRPA1-203ENST00000540017 GFI1BQ5VTD9 330 aa13.07□□□□□ -0.32
SNRPA1-203ENST00000540017 ODF3Q96PU9 254 aa13.07□□□□□ -0.32
SNRPA1-203ENST00000540017 LINC01587Q99440 93 aa13.07□□□□□ -0.32
SNRPA1-203ENST00000540017 VGLL1Q99990 258 aa13.07□□□□□ -0.32
SNRPA1-203ENST00000540017 Q9H3A6 140 aa13.07□□□□□ -0.32
SNRPA1-203ENST00000540017 DKK2Q9UBU2 259 aa13.07□□□□□ -0.32
SNRPA1-203ENST00000540017 YTHDF2Q9Y5A9 579 aaKnown RBP13.07□□□□□ -0.32
SNRPA1-203ENST00000540017 JTBO76095 146 aa13.06□□□□□ -0.32
SNRPA1-203ENST00000540017 SPART-AS1P0CW21 52 aa13.06□□□□□ -0.32
SNRPA1-203ENST00000540017 TSPOP30536 169 aa13.06□□□□□ -0.32
SNRPA1-203ENST00000540017 OR11H4Q8NGC9 324 aa13.06□□□□□ -0.32
SNRPA1-203ENST00000540017 FAM19A4Q96LR4 140 aa13.06□□□□□ -0.32
SNRPA1-203ENST00000540017 CYTL1Q9NRR1 136 aa13.06□□□□□ -0.32
SNRPA1-203ENST00000540017 BORCS7-ASMTA0A0B4J1R7 106 aa13.05□□□□□ -0.32
SNRPA1-203ENST00000540017 PLAC8L1A1L4L8 177 aa13.05□□□□□ -0.32
SNRPA1-203ENST00000540017 LEPP41159 167 aa13.05□□□□□ -0.32
SNRPA1-203ENST00000540017 CDC34P49427 236 aaPredicted RBP13.05□□□□□ -0.32
SNRPA1-203ENST00000540017 SERF2P84101 59 aa13.05□□□□□ -0.32
SNRPA1-203ENST00000540017 PQLC2Q6ZP29 291 aa13.05□□□□□ -0.32
SNRPA1-203ENST00000540017 C9orf47Q6ZRZ4 202 aa13.05□□□□□ -0.32
SNRPA1-203ENST00000540017 LYPD1Q8N2G4 141 aa13.05□□□□□ -0.32
SNRPA1-203ENST00000540017 TMEM256Q8N2U0 113 aa13.05□□□□□ -0.32
SNRPA1-203ENST00000540017 RAB24Q969Q5 203 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms