RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 MRPS12O15235 138 aaKnown RBP13.87□□□□□ -0.19
RAB40C-205ENST00000539661 PLGLAQ15195 96 aa13.87□□□□□ -0.19
RAB40C-205ENST00000539661 S100A7AQ86SG5 101 aa13.87□□□□□ -0.19
RAB40C-205ENST00000539661 WFDC8Q8IUA0 241 aa13.87□□□□□ -0.19
RAB40C-205ENST00000539661 CEACAM4O75871 244 aa13.86□□□□□ -0.19
RAB40C-205ENST00000539661 LOXP28300 417 aaPredicted RBP13.86□□□□□ -0.19
RAB40C-205ENST00000539661 CKS2P33552 79 aa13.86□□□□□ -0.19
RAB40C-205ENST00000539661 C8orf49Q96NF6 230 aa13.86□□□□□ -0.19
RAB40C-205ENST00000539661 CNTFRP26992 372 aa13.86□□□□□ -0.19
RAB40C-205ENST00000539661 SAMD13Q5VXD3 122 aa13.86□□□□□ -0.19
RAB40C-205ENST00000539661 ZMAT4Q9H898 229 aa13.86□□□□□ -0.19
RAB40C-205ENST00000539661 ASH1LQ9NR48 2969 aaKnown RBP13.85□□□□□ -0.19
RAB40C-205ENST00000539661 AAMDCQ9H7C9 122 aa13.85□□□□□ -0.19
RAB40C-205ENST00000539661 PLXNB1O43157 2135 aa13.85□□□□□ -0.19
RAB40C-205ENST00000539661 SH2D1AO60880 128 aa13.85□□□□□ -0.19
RAB40C-205ENST00000539661 ASCL2Q99929 193 aa13.85□□□□□ -0.19
RAB40C-205ENST00000539661 KAAG1Q9UBP8 84 aa13.85□□□□□ -0.19
RAB40C-205ENST00000539661 DKK2Q9UBU2 259 aa13.85□□□□□ -0.19
RAB40C-205ENST00000539661 FAM215AQ9Y5M1 114 aa13.85□□□□□ -0.19
RAB40C-205ENST00000539661 SPTBN4Q9H254 2564 aa13.84□□□□□ -0.19
RAB40C-205ENST00000539661 WI2-2373I1.2A0A1W2PRP0 233 aa13.84□□□□□ -0.19
RAB40C-205ENST00000539661 VSTM5A8MXK1 200 aa13.84□□□□□ -0.19
RAB40C-205ENST00000539661 NDUFS8O00217 210 aa13.84□□□□□ -0.19
RAB40C-205ENST00000539661 NPYP01303 97 aa13.84□□□□□ -0.19
RAB40C-205ENST00000539661 PRSS57Q6UWY2 283 aa13.84□□□□□ -0.19
RAB40C-205ENST00000539661 LYPD2Q6UXB3 125 aa13.84□□□□□ -0.19
RAB40C-205ENST00000539661 IGF2RP11717 2491 aa13.84□□□□□ -0.19
RAB40C-205ENST00000539661 BCL6BQ8N143 479 aaPredicted RBP13.84□□□□□ -0.19
RAB40C-205ENST00000539661 ZNF491Q8N8L2 437 aa13.84□□□□□ -0.19
RAB40C-205ENST00000539661 RNF125Q96EQ8 232 aa13.84□□□□□ -0.19
RAB40C-205ENST00000539661 HLA-DRB4P13762 266 aa13.83□□□□□ -0.19
RAB40C-205ENST00000539661 TCTAP57738 103 aa13.83□□□□□ -0.19
RAB40C-205ENST00000539661 CTSZQ9UBR2 303 aa13.83□□□□□ -0.19
RAB40C-205ENST00000539661 SELENOKQ9Y6D0 94 aa13.83□□□□□ -0.19
RAB40C-205ENST00000539661 HLA-DRB4X5D2U9 266 aa13.83□□□□□ -0.19
RAB40C-205ENST00000539661 FXYD7P58549 80 aa13.83□□□□□ -0.2
RAB40C-205ENST00000539661 DEFB109BQ30KR1 87 aa13.83□□□□□ -0.2
RAB40C-205ENST00000539661 C1orf185Q5T7R7 199 aa13.83□□□□□ -0.2
RAB40C-205ENST00000539661 TMEM108Q6UXF1 575 aa13.83□□□□□ -0.2
RAB40C-205ENST00000539661 VGLL1Q99990 258 aa13.83□□□□□ -0.2
RAB40C-205ENST00000539661 MAP1LC3AQ9H492 121 aa13.83□□□□□ -0.2
RAB40C-205ENST00000539661 DCHS2Q6V1P9 2916 aa13.83□□□□□ -0.2
RAB40C-205ENST00000539661 PLCE1Q9P212 2302 aa13.83□□□□□ -0.2
RAB40C-205ENST00000539661 SPTA1P02549 2419 aa13.83□□□□□ -0.2
RAB40C-205ENST00000539661 M0R3E3 92 aa13.82□□□□□ -0.2
RAB40C-205ENST00000539661 GCSHP23434 173 aa13.82□□□□□ -0.2
RAB40C-205ENST00000539661 ADIPOQQ15848 244 aa13.82□□□□□ -0.2
RAB40C-205ENST00000539661 RNF5Q99942 180 aa13.82□□□□□ -0.2
RAB40C-205ENST00000539661 SMPXQ9UHP9 88 aa13.82□□□□□ -0.2
RAB40C-205ENST00000539661 TLN1Q9Y490 2541 aaKnown RBP13.82□□□□□ -0.2
RAB40C-205ENST00000539661 ATRXP46100 2492 aa13.82□□□□□ -0.2
RAB40C-205ENST00000539661 TMSB15BA0A087X1C1 80 aa13.82□□□□□ -0.2
RAB40C-205ENST00000539661 IGHV1-3A0A0C4DH29 117 aa13.82□□□□□ -0.2
RAB40C-205ENST00000539661 K7EIM0 57 aa13.82□□□□□ -0.2
RAB40C-205ENST00000539661 EVI2AP22794 236 aa13.82□□□□□ -0.2
RAB40C-205ENST00000539661 FXYD2P54710 66 aa13.82□□□□□ -0.2
RAB40C-205ENST00000539661 RPL24P83731 157 aaKnown RBP13.82□□□□□ -0.2
RAB40C-205ENST00000539661 SRSF1Q07955 248 aaKnown RBP eCLIP13.82□□□□□ -0.2
RAB40C-205ENST00000539661 ODF1Q14990 250 aa13.82□□□□□ -0.2
RAB40C-205ENST00000539661 C22orf34Q6ZV56 151 aa13.82□□□□□ -0.2
RAB40C-205ENST00000539661 CHAC1Q9BUX1 264 aa13.82□□□□□ -0.2
RAB40C-205ENST00000539661 HHLA3Q9XRX5 114 aa13.82□□□□□ -0.2
RAB40C-205ENST00000539661 TEX48A0A1B0GUV7 120 aa13.81□□□□□ -0.2
RAB40C-205ENST00000539661 FCER1GP30273 86 aa13.81□□□□□ -0.2
RAB40C-205ENST00000539661 SRSF2Q01130 221 aaKnown RBP13.81□□□□□ -0.2
RAB40C-205ENST00000539661 CLEC2AQ6UVW9 174 aa13.81□□□□□ -0.2
RAB40C-205ENST00000539661 PHLDA1Q8WV24 401 aaPredicted RBP13.81□□□□□ -0.2
RAB40C-205ENST00000539661 TM2D2Q9BX73 214 aa13.81□□□□□ -0.2
RAB40C-205ENST00000539661 IGLV1-47P01700 117 aa13.81□□□□□ -0.2
RAB40C-205ENST00000539661 PPIAL4GP0DN37 164 aa13.81□□□□□ -0.2
RAB40C-205ENST00000539661 FCGR2BP31994 310 aaPredicted RBP13.81□□□□□ -0.2
RAB40C-205ENST00000539661 FAM27E3Q08E93 113 aa13.81□□□□□ -0.2
RAB40C-205ENST00000539661 TWIST1Q15672 202 aa13.81□□□□□ -0.2
RAB40C-205ENST00000539661 PIP4P1Q86T03 277 aa13.81□□□□□ -0.2
RAB40C-205ENST00000539661 IL4P05112 153 aa13.8□□□□□ -0.2
RAB40C-205ENST00000539661 IGLC6P0CF74 106 aa13.8□□□□□ -0.2
RAB40C-205ENST00000539661 BMI1P35226 326 aa13.8□□□□□ -0.2
RAB40C-205ENST00000539661 CCL17Q92583 94 aa13.8□□□□□ -0.2
RAB40C-205ENST00000539661 NXT2Q9NPJ8 142 aaKnown RBP13.8□□□□□ -0.2
RAB40C-205ENST00000539661 PKDREJQ9NTG1 2253 aa13.8□□□□□ -0.2
RAB40C-205ENST00000539661 PPIAL4CA0A0B4J2A2 164 aa13.8□□□□□ -0.2
RAB40C-205ENST00000539661 ZNF562Q6V9R5 426 aa13.8□□□□□ -0.2
RAB40C-205ENST00000539661 ZGRF1Q86YA3 2104 aa13.8□□□□□ -0.2
RAB40C-205ENST00000539661 SIGMAR1Q99720 223 aa13.8□□□□□ -0.2
RAB40C-205ENST00000539661 RAB1BQ9H0U4 201 aa13.8□□□□□ -0.2
RAB40C-205ENST00000539661 FBXL15Q9H469 300 aa13.8□□□□□ -0.2
RAB40C-205ENST00000539661 F8W1H4 67 aa13.79□□□□□ -0.2
RAB40C-205ENST00000539661 SMKR1H3BMG3 65 aa13.79□□□□□ -0.2
RAB40C-205ENST00000539661 IGKCP01834 107 aa13.79□□□□□ -0.2
RAB40C-205ENST00000539661 J3QR89 54 aa13.79□□□□□ -0.2
RAB40C-205ENST00000539661 TM4SF20Q53R12 229 aa13.79□□□□□ -0.2
RAB40C-205ENST00000539661 PRR25Q96S07 402 aa13.79□□□□□ -0.2
RAB40C-205ENST00000539661 CNFNQ9BYD5 112 aa13.79□□□□□ -0.2
RAB40C-205ENST00000539661 IGKV2D-26A0A0A0MRZ7 120 aa13.78□□□□□ -0.2
RAB40C-205ENST00000539661 BUB1B-PAK6H3BSN5 160 aa13.78□□□□□ -0.2
RAB40C-205ENST00000539661 ATP5LO75964 103 aa13.78□□□□□ -0.2
RAB40C-205ENST00000539661 PRSS33Q8NF86 280 aa13.78□□□□□ -0.2
RAB40C-205ENST00000539661 EGR2P11161 476 aaPredicted RBP13.78□□□□□ -0.2
RAB40C-205ENST00000539661 LEPP41159 167 aa13.78□□□□□ -0.2
RAB40C-205ENST00000539661 FOXI2Q6ZQN5 318 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms