RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 HTN1P15515 57 aa3.68□□□□□ -1.82
SNHG1-207ENST00000537965 RPL7P18124 248 aaKnown RBP3.68□□□□□ -1.82
SNHG1-207ENST00000537965 TGFBR1P36897 503 aa3.68□□□□□ -1.82
SNHG1-207ENST00000537965 CDKN1BP46527 198 aa3.68□□□□□ -1.82
SNHG1-207ENST00000537965 ERVFC1-1P60608 527 aa3.68□□□□□ -1.82
SNHG1-207ENST00000537965 FGL1Q08830 312 aa3.68□□□□□ -1.82
SNHG1-207ENST00000537965 OR2F1Q13607 317 aa3.68□□□□□ -1.82
SNHG1-207ENST00000537965 FCN2Q15485 313 aa3.68□□□□□ -1.82
SNHG1-207ENST00000537965 NFE4Q86UQ8 179 aa3.68□□□□□ -1.82
SNHG1-207ENST00000537965 LYPD1Q8N2G4 141 aa3.68□□□□□ -1.82
SNHG1-207ENST00000537965 THAP8Q8NA92 274 aa3.68□□□□□ -1.82
SNHG1-207ENST00000537965 OR1S1Q8NH92 325 aa3.68□□□□□ -1.82
SNHG1-207ENST00000537965 LHFPL5Q8TAF8 219 aa3.68□□□□□ -1.82
SNHG1-207ENST00000537965 YIPF6Q96EC8 236 aa3.68□□□□□ -1.82
SNHG1-207ENST00000537965 ZNF479Q96JC4 524 aa3.68□□□□□ -1.82
SNHG1-207ENST00000537965 RBKSQ9H477 322 aa3.68□□□□□ -1.82
SNHG1-207ENST00000537965 NOP10Q9NPE3 64 aaKnown RBP3.68□□□□□ -1.82
SNHG1-207ENST00000537965 ZNF586Q9NXT0 402 aa3.68□□□□□ -1.82
SNHG1-207ENST00000537965 EXTL2Q9UBQ6 330 aa3.68□□□□□ -1.82
SNHG1-207ENST00000537965 MRPS16Q9Y3D3 137 aaKnown RBP3.68□□□□□ -1.82
SNHG1-207ENST00000537965 TRAV9-2A0A087WT02 112 aa3.67□□□□□ -1.82
SNHG1-207ENST00000537965 TRAV26-1A0A087WT03 109 aa3.67□□□□□ -1.82
SNHG1-207ENST00000537965 PLAC8L1A1L4L8 177 aa3.67□□□□□ -1.82
SNHG1-207ENST00000537965 K7EP13 123 aa3.67□□□□□ -1.82
SNHG1-207ENST00000537965 ZNF701M0R085 212 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-207ENST00000537965 ATP6V1G2O95670 118 aa3.67□□□□□ -1.82
SNHG1-207ENST00000537965 SLC25A6P12236 298 aa3.67□□□□□ -1.82
SNHG1-207ENST00000537965 ORM2P19652 201 aa3.67□□□□□ -1.82
SNHG1-207ENST00000537965 AZU1P20160 251 aa3.67□□□□□ -1.82
SNHG1-207ENST00000537965 VBP1P61758 197 aa3.67□□□□□ -1.82
SNHG1-207ENST00000537965 HIST1H1AQ02539 215 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-207ENST00000537965 PSG3Q16557 428 aa3.67□□□□□ -1.82
SNHG1-207ENST00000537965 ESRGQ1W209 222 aa3.67□□□□□ -1.82
SNHG1-207ENST00000537965 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.67□□□□□ -1.82
SNHG1-207ENST00000537965 BAP18Q8IXM2 172 aa3.67□□□□□ -1.82
SNHG1-207ENST00000537965 ZBTB8BQ8NAP8 495 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-207ENST00000537965 OR8A1Q8NGG7 326 aa3.67□□□□□ -1.82
SNHG1-207ENST00000537965 OR4D10Q8NGI6 311 aa3.67□□□□□ -1.82
SNHG1-207ENST00000537965 OR51S1Q8NGJ8 323 aa3.67□□□□□ -1.82
SNHG1-207ENST00000537965 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
SNHG1-207ENST00000537965 PAIP2BQ9ULR5 123 aaKnown RBP3.67□□□□□ -1.82
SNHG1-207ENST00000537965 DYNC1H1Q14204 4646 aaKnown RBP3.66□□□□□ -1.82
SNHG1-207ENST00000537965 TRAV12-2A0A075B6T6 113 aa3.66□□□□□ -1.82
SNHG1-207ENST00000537965 IGKV1OR2-108A0A075B7D4 117 aa3.66□□□□□ -1.82
SNHG1-207ENST00000537965 A0A087X0K7 114 aa3.66□□□□□ -1.82
SNHG1-207ENST00000537965 SIVA1O15304 175 aa3.66□□□□□ -1.82
SNHG1-207ENST00000537965 RGS5O15539 181 aa3.66□□□□□ -1.82
SNHG1-207ENST00000537965 HYPMO75409 117 aa3.66□□□□□ -1.82
SNHG1-207ENST00000537965 PRM2P04554 102 aa3.66□□□□□ -1.82
SNHG1-207ENST00000537965 IL5P05113 134 aa3.66□□□□□ -1.82
SNHG1-207ENST00000537965 CXCL2P19875 107 aa3.66□□□□□ -1.82
SNHG1-207ENST00000537965 ANXA7P20073 488 aaKnown RBP3.66□□□□□ -1.82
SNHG1-207ENST00000537965 SELENOTP62341 195 aa3.66□□□□□ -1.82
SNHG1-207ENST00000537965 DLK1P80370 383 aa3.66□□□□□ -1.82
SNHG1-207ENST00000537965 AKR1C1Q04828 323 aa3.66□□□□□ -1.82
SNHG1-207ENST00000537965 SLAQ13239 276 aa3.66□□□□□ -1.82
SNHG1-207ENST00000537965 Q5VSD8 79 aa3.66□□□□□ -1.82
SNHG1-207ENST00000537965 LYZL2Q7Z4W2 148 aa3.66□□□□□ -1.82
SNHG1-207ENST00000537965 CCDC190Q86UF4 302 aa3.66□□□□□ -1.82
SNHG1-207ENST00000537965 CLVS1Q8IUQ0 354 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-207ENST00000537965 RNASE8Q8TDE3 154 aaKnown RBP3.66□□□□□ -1.82
SNHG1-207ENST00000537965 SMIM4Q8WVI0 70 aa3.66□□□□□ -1.82
SNHG1-207ENST00000537965 URB1-AS1Q96HZ7 61 aa3.66□□□□□ -1.82
SNHG1-207ENST00000537965 UHRF2Q96PU4 802 aa3.66□□□□□ -1.82
SNHG1-207ENST00000537965 SLC50A1Q9BRV3 221 aa3.66□□□□□ -1.82
SNHG1-207ENST00000537965 FUNDC2Q9BWH2 189 aa3.66□□□□□ -1.82
SNHG1-207ENST00000537965 SLC25A39Q9BZJ4 359 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-207ENST00000537965 HIGD1AQ9Y241 93 aa3.66□□□□□ -1.82
SNHG1-207ENST00000537965 DNAH11Q96DT5 4516 aa3.65□□□□□ -1.82
SNHG1-207ENST00000537965 ABCA13Q86UQ4 5058 aa3.65□□□□□ -1.82
SNHG1-207ENST00000537965 TRAV8-2A0A0B4J237 113 aa3.65□□□□□ -1.83
SNHG1-207ENST00000537965 A0A0J9YY99 117 aa3.65□□□□□ -1.83
SNHG1-207ENST00000537965 H3BRN7 92 aa3.65□□□□□ -1.83
SNHG1-207ENST00000537965 CTDSPLO15194 276 aa3.65□□□□□ -1.83
SNHG1-207ENST00000537965 SYNGR2O43760 224 aa3.65□□□□□ -1.83
SNHG1-207ENST00000537965 PITX3O75364 302 aa3.65□□□□□ -1.83
SNHG1-207ENST00000537965 GAGE7O76087 117 aa3.65□□□□□ -1.83
SNHG1-207ENST00000537965 OR5G3P0C626 314 aa3.65□□□□□ -1.83
SNHG1-207ENST00000537965 GAGE12FP0CL80 117 aa3.65□□□□□ -1.83
SNHG1-207ENST00000537965 GAGE12GP0CL81 117 aa3.65□□□□□ -1.83
SNHG1-207ENST00000537965 GAGE12IP0CL82 117 aa3.65□□□□□ -1.83
SNHG1-207ENST00000537965 CXCL3P19876 107 aa3.65□□□□□ -1.83
SNHG1-207ENST00000537965 FAUP35544 74 aaKnown RBP3.65□□□□□ -1.83
SNHG1-207ENST00000537965 LINC00315P59091 139 aa3.65□□□□□ -1.83
SNHG1-207ENST00000537965 PLP1P60201 277 aa3.65□□□□□ -1.83
SNHG1-207ENST00000537965 NCS1P62166 190 aa3.65□□□□□ -1.83
SNHG1-207ENST00000537965 DAZ2Q13117 558 aaKnown RBP3.65□□□□□ -1.83
SNHG1-207ENST00000537965 TMEM128Q5BJH2 165 aa3.65□□□□□ -1.83
SNHG1-207ENST00000537965 SERTAD4-AS1Q5TG53 156 aa3.65□□□□□ -1.83
SNHG1-207ENST00000537965 LCN15Q6UWW0 184 aa3.65□□□□□ -1.83
SNHG1-207ENST00000537965 RNF182Q8N6D2 247 aa3.65□□□□□ -1.83
SNHG1-207ENST00000537965 LINC00612Q8N6U2 182 aa3.65□□□□□ -1.83
SNHG1-207ENST00000537965 RPUSD4Q96CM3 377 aaKnown RBP3.65□□□□□ -1.83
SNHG1-207ENST00000537965 C18orf15Q96N68 181 aa3.65□□□□□ -1.83
SNHG1-207ENST00000537965 PYGO2Q9BRQ0 406 aa3.65□□□□□ -1.83
SNHG1-207ENST00000537965 SHANK2-AS3Q9BTD1 123 aa3.65□□□□□ -1.83
SNHG1-207ENST00000537965 STRAPQ9Y3F4 350 aaKnown RBP3.65□□□□□ -1.83
SNHG1-207ENST00000537965 TRGV2A0A075B6R0 118 aa3.64□□□□□ -1.83
SNHG1-207ENST00000537965 A0A096LPF7 62 aa3.64□□□□□ -1.83
SNHG1-207ENST00000537965 ANKRD20A5PA0PJZ0 165 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms