RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 IGHV3-35A0A0C4DH35 117 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 IZUMO1RA6ND01 250 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 PPP5D1E7EU14 171 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 K7EIM0 57 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 K7EPK0 472 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 GPR31O00270 319 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 RGS5O15539 181 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 RBFOX2O43251 390 aaKnown RBP eCLIP1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 KBTBD11O94819 623 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 OR2A4O95047 310 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 GAS8-AS1O95177 125 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 CNIH1O95406 144 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 BRI3O95415 125 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 CDS2O95674 445 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 KRASP01116 189 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 IGHV3-48P01763 117 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 GALR1P47211 349 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 CCR6P51684 374 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 PIGPP57054 158 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 TAS2R46P59540 309 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 POLR2GP62487 172 aaKnown RBP eCLIP1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 HBG1P69891 147 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 HBG2P69892 147 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 EGFEM1PQ0D2K5 195 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 MSMO1Q15800 293 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 ZNF726P1Q15940 193 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 ZNF876PQ49A33 203 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 ZFP69Q49AA0 526 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 SPINK9Q5DT21 86 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 C9orf66Q5T8R8 295 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 UFSP1Q6NVU6 142 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 ZNF343Q6P1L6 599 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 UNQ5815/PRO19632Q6UWF5 114 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 UNQ9165/PRO28630Q6UXU0 137 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 GSG1LQ6UXU4 331 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 LYZL2Q7Z4W2 148 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 FAM19A5Q7Z5A7 132 aaPredicted RBP1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 NIT1Q86X76 327 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 LGI3Q8N145 548 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 TTC9CQ8N5M4 171 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 SLC35G3Q8N808 338 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 KLHL30-AS1Q8NEE0 82 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 OR11H1Q8NG94 326 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 OR5H2Q8NGV7 314 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 MCFD2Q8NI22 146 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 BLNKQ8WV28 456 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 C4orf3Q8WVX3 66 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 SRSF12Q8WXF0 261 aaKnown RBP1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 TMEM190Q8WZ59 177 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 DCUN1D4Q92564 292 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 GPR146Q96CH1 333 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 GALNT14Q96FL9 552 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 PRAC1Q96KF2 57 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 OR10C1Q96KK4 312 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 UBE2E2Q96LR5 201 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 OR2A7Q96R45 310 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 METTL26Q96S19 204 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 HSD17B10Q99714 261 aaKnown RBP1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 PRRT1Q99946 306 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 BATF3Q9NR55 127 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 SPANXA1Q9NS26 97 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 TMEM14BQ9NUH8 114 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 BET1LQ9NYM9 111 aa1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 RBM7Q9Y580 266 aaKnown RBP1.88□□□□□ -2.11
TNFRSF1A-210ENST00000537842 IGLV11-55A0A075B6I3 123 aa1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 IGHV3OR16-8A0A075B7F1 116 aa1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 TRAV8-2A0A0B4J237 113 aa1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 KIR2DL5BA0A0G2JN68 375 aa1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 KIR2DL5BA0A0G2JPC4 375 aa1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 C3orf85A0A1B0GTC6 90 aa1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 SMIM31A0A1B0GVY4 71 aa1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 CRYM-AS1A6NIL9 109 aa1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 I3L2K1 104 aa1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 TAAR5O14804 337 aa1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 PITX3O75364 302 aa1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 DUSP14O95147 198 aaKnown RBP1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 APOA2P02652 100 aa1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 TRGV3P03979 118 aa1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 APOBP04114 4563 aaKnown RBP1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 HSPB1P04792 205 aaKnown RBP1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 CTSDP07339 412 aaPredicted RBP1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 CTSGP08311 255 aa1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 GIPP09681 153 aaPredicted RBP1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 OR5AC1P0C628 307 aa1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 LINC00614P0C842 121 aa1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 HIST1H1EP10412 219 aaKnown RBP1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 SPNP16150 400 aa1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 MYCNOSP40205 109 aa1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 RPL27AP46776 148 aaKnown RBP1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 SYNJ2BPP57105 145 aa1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 TPPP2P59282 170 aa1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 RHOGP84095 191 aa1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 PLGLAQ15195 96 aa1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 PRR4Q16378 134 aa1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 RTL8BQ17RB0 113 aa1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 C15orf32Q32M92 178 aa1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 SCGB2B2Q4G0G5 96 aa1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 PYDC2Q56P42 97 aa1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 RNASE10Q5GAN6 216 aaKnown RBP1.87□□□□□ -2.11
TNFRSF1A-210ENST00000537842 NMSQ5H8A3 153 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms