RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 SPTSSAQ969W0 71 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 IFI27L1Q96BM0 104 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 FXYD5Q96DB9 178 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 RPP25Q9BUL9 199 aaKnown RBP2.46□□□□□ -2.02
CSDE1-216ENST00000534389 MRPL32Q9BYC8 188 aaKnown RBP2.46□□□□□ -2.02
CSDE1-216ENST00000534389 VCX2Q9H322 139 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 C21orf62Q9NYP8 219 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 ZNF492Q9P255 531 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 KLK5Q9Y337 293 aaPredicted RBP2.46□□□□□ -2.02
CSDE1-216ENST00000534389 AMMECR1Q9Y4X0 333 aaPredicted RBP2.46□□□□□ -2.02
CSDE1-216ENST00000534389 KLF12Q9Y4X4 402 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 SOX21Q9Y651 276 aaPredicted RBP2.46□□□□□ -2.02
CSDE1-216ENST00000534389 TANC2Q9HCD6 1990 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 MED12Q93074 2177 aa2.46□□□□□ -2.02
CSDE1-216ENST00000534389 UNC13CQ8NB66 2214 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 TMSB15BA0A087X1C1 80 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 LOC389332A0A1B0GUA5 103 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 LINC01546A6NGU7 62 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 TMEM150CB9EJG8 249 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 C12orf77C9JDV5 145 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 SMKR1H3BMG3 65 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 K7EM74 188 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 LINC01565O15544 149 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 GAS8-AS1O95177 125 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 TCL1BO95988 128 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 IGLV2-11P01706 119 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 TFF1P04155 84 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 ARMS2P0C7Q2 107 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 C8orf88P0DMB2 117 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 CRIP2P52943 208 aaPredicted RBP2.45□□□□□ -2.02
CSDE1-216ENST00000534389 UBE2D3P61077 147 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 UBE2D2P62837 147 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 TAL2Q16559 108 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 UTF1Q5T230 341 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 HES3Q5TGS1 186 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 WDR86Q86TI4 376 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 C17orf82Q86X59 251 aaPredicted RBP2.45□□□□□ -2.02
CSDE1-216ENST00000534389 MKXQ8IYA7 352 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 CIARTQ8N365 385 aaPredicted RBP2.45□□□□□ -2.02
CSDE1-216ENST00000534389 NFAM1Q8NET5 270 aaPredicted RBP2.45□□□□□ -2.02
CSDE1-216ENST00000534389 OR1L8Q8NGR8 309 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 SLC37A2Q8TED4 501 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 TMEM101Q96IK0 257 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 ASCL2Q99929 193 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 RASL11BQ9BPW5 248 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 DCTN5Q9BTE1 182 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 PKIBQ9C010 78 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 OR2H1Q9GZK4 316 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 TMEM126AQ9H061 195 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 FBXL15Q9H469 300 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 MAP1LC3AQ9H492 121 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 CTSZQ9UBR2 303 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 EPDR1Q9UM22 224 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 SIGLEC9Q9Y336 463 aa2.45□□□□□ -2.02
CSDE1-216ENST00000534389 TET2Q6N021 2002 aaPredicted RBP2.44□□□□□ -2.02
CSDE1-216ENST00000534389 PDE4DIPQ5VU43 2346 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 EML6Q6ZMW3 1958 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 EXPH5Q8NEV8 1989 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 A0A0J9YW62 118 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 A0A1B0GUV1 79 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 TMEM213A2RRL7 107 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 SHISA9B4DS77 424 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 C9JAW5 83 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 TMEM262E9PQX1 116 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 LINC01619G3V211 115 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 SS18L1O75177 396 aaPredicted RBP2.44□□□□□ -2.02
CSDE1-216ENST00000534389 OR2H2O95918 312 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 NPYP01303 97 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 CD7P09564 240 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 PRB4P10163 310 aaPredicted RBP2.44□□□□□ -2.02
CSDE1-216ENST00000534389 HLA-DRB4P13762 266 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 CRIP1P50238 77 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 UBE2D1P51668 147 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 RPS21P63220 83 aaKnown RBP2.44□□□□□ -2.02
CSDE1-216ENST00000534389 UBE2L3P68036 154 aaKnown RBP2.44□□□□□ -2.02
CSDE1-216ENST00000534389 SRYQ05066 204 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 TTC32Q5I0X7 151 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 CEMP1Q6PRD7 247 aaPredicted RBP2.44□□□□□ -2.02
CSDE1-216ENST00000534389 SFTA2Q6UW10 78 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 ZNF493Q6ZR52 646 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 PPP1R27Q86WC6 154 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 C15orf53Q8NAA6 179 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 OR1L4Q8NGR5 311 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 DLX4Q92988 240 aaPredicted RBP2.44□□□□□ -2.02
CSDE1-216ENST00000534389 LINC01600Q96MT4 127 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 CHCHD5Q9BSY4 110 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 SRXN1Q9BYN0 137 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 GFRA4Q9GZZ7 299 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 CYSTM1Q9H1C7 97 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 NGBQ9NPG2 151 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 MRPL36Q9P0J6 103 aaKnown RBP2.44□□□□□ -2.02
CSDE1-216ENST00000534389 DEC1Q9P2X7 70 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 HIGD1AQ9Y241 93 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 HLA-DRB4X5D2U9 266 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 SRCAPQ6ZRS2 3230 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 CACNA1DQ01668 2161 aa2.44□□□□□ -2.02
CSDE1-216ENST00000534389 COL5A1P20908 1838 aaPredicted RBP2.44□□□□□ -2.02
CSDE1-216ENST00000534389 DIDO1Q9BTC0 2240 aaKnown RBP2.44□□□□□ -2.02
CSDE1-216ENST00000534389 PTPRBP23467 1997 aa2.43□□□□□ -2.02
CSDE1-216ENST00000534389 AGRNO00468 2067 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms