RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 TMEM88Q6PEY1 159 aa9.47□□□□□ -0.89
CAPN1-228ENST00000534373 UBE2DNLQ8IWF7 75 aa9.47□□□□□ -0.89
CAPN1-228ENST00000534373 C16orf74Q96GX8 76 aa9.47□□□□□ -0.89
CAPN1-228ENST00000534373 SLC39A9Q9NUM3 307 aa9.47□□□□□ -0.89
CAPN1-228ENST00000534373 TIMM8BQ9Y5J9 83 aaPredicted RBP9.47□□□□□ -0.89
CAPN1-228ENST00000534373 IGSF23A1L1A6 192 aa9.46□□□□□ -0.9
CAPN1-228ENST00000534373 H3BQ15 152 aa9.46□□□□□ -0.9
CAPN1-228ENST00000534373 RLN2P04090 185 aa9.46□□□□□ -0.9
CAPN1-228ENST00000534373 PRM2P04554 102 aa9.46□□□□□ -0.9
CAPN1-228ENST00000534373 DEFB130BP0DP73 79 aa9.46□□□□□ -0.9
CAPN1-228ENST00000534373 DEFB130AP0DP74 79 aa9.46□□□□□ -0.9
CAPN1-228ENST00000534373 BAXQ07812 192 aa9.46□□□□□ -0.9
CAPN1-228ENST00000534373 MRPL53Q96EL3 112 aaKnown RBP9.46□□□□□ -0.9
CAPN1-228ENST00000534373 ODF3Q96PU9 254 aa9.46□□□□□ -0.9
CAPN1-228ENST00000534373 TMEM14CQ9P0S9 112 aa9.46□□□□□ -0.9
CAPN1-228ENST00000534373 DNAH2Q9P225 4427 aa9.45□□□□□ -0.9
CAPN1-228ENST00000534373 HECTD4Q9Y4D8 3996 aa9.45□□□□□ -0.9
CAPN1-228ENST00000534373 UBE2L5PA0A1B0GUS4 154 aa9.45□□□□□ -0.9
CAPN1-228ENST00000534373 SLC17A3O00476 420 aa9.45□□□□□ -0.9
CAPN1-228ENST00000534373 ATP5G1P05496 136 aa9.45□□□□□ -0.9
CAPN1-228ENST00000534373 SNRPCP09234 159 aaKnown RBP9.45□□□□□ -0.9
CAPN1-228ENST00000534373 ATP5G3P48201 142 aa9.45□□□□□ -0.9
CAPN1-228ENST00000534373 CYCSP99999 105 aaKnown RBP9.45□□□□□ -0.9
CAPN1-228ENST00000534373 RNASE8Q8TDE3 154 aaKnown RBP9.45□□□□□ -0.9
CAPN1-228ENST00000534373 TMEM263Q8WUH6 116 aaKnown RBP9.45□□□□□ -0.9
CAPN1-228ENST00000534373 NMES1Q9C002 83 aa9.45□□□□□ -0.9
CAPN1-228ENST00000534373 SLC25A31Q9H0C2 315 aa9.45□□□□□ -0.9
CAPN1-228ENST00000534373 TRBV19A0A075B6N1 114 aa9.44□□□□□ -0.9
CAPN1-228ENST00000534373 TRAV5A0A0B4J249 113 aa9.44□□□□□ -0.9
CAPN1-228ENST00000534373 PRAC2D3DTV9 90 aa9.44□□□□□ -0.9
CAPN1-228ENST00000534373 E5RGE8 158 aa9.44□□□□□ -0.9
CAPN1-228ENST00000534373 PRAF2O60831 178 aa9.44□□□□□ -0.9
CAPN1-228ENST00000534373 HIST1H1EP10412 219 aaKnown RBP9.44□□□□□ -0.9
CAPN1-228ENST00000534373 HTN1P15515 57 aa9.44□□□□□ -0.9
CAPN1-228ENST00000534373 FGF7P21781 194 aa9.44□□□□□ -0.9
CAPN1-228ENST00000534373 PDE6HQ13956 83 aa9.44□□□□□ -0.9
CAPN1-228ENST00000534373 CCDC28AQ8IWP9 274 aa9.44□□□□□ -0.9
CAPN1-228ENST00000534373 ZNF586Q9NXT0 402 aa9.44□□□□□ -0.9
CAPN1-228ENST00000534373 PRELID1Q9Y255 219 aa9.44□□□□□ -0.9
CAPN1-228ENST00000534373 NPIPB6E9PJ23 425 aa9.43□□□□□ -0.9
CAPN1-228ENST00000534373 INMT-MINDY4F8WBC2 141 aa9.43□□□□□ -0.9
CAPN1-228ENST00000534373 H3BTX0 84 aa9.43□□□□□ -0.9
CAPN1-228ENST00000534373 LEPP41159 167 aa9.43□□□□□ -0.9
CAPN1-228ENST00000534373 Q6ZR54 194 aa9.43□□□□□ -0.9
CAPN1-228ENST00000534373 NPCDR1Q9BY65 106 aa9.43□□□□□ -0.9
CAPN1-228ENST00000534373 FAT2Q9NYQ8 4349 aa9.42□□□□□ -0.9
CAPN1-228ENST00000534373 F5H768 121 aa9.42□□□□□ -0.9
CAPN1-228ENST00000534373 M0R2N4 97 aa9.42□□□□□ -0.9
CAPN1-228ENST00000534373 CT45A10P0DMU9 189 aa9.42□□□□□ -0.9
CAPN1-228ENST00000534373 NHLH2Q02577 135 aa9.42□□□□□ -0.9
CAPN1-228ENST00000534373 FCN2Q15485 313 aa9.42□□□□□ -0.9
CAPN1-228ENST00000534373 SOHLH1Q5JUK2 328 aa9.42□□□□□ -0.9
CAPN1-228ENST00000534373 GFI1BQ5VTD9 330 aa9.42□□□□□ -0.9
CAPN1-228ENST00000534373 OR5C1Q8NGR4 320 aa9.42□□□□□ -0.9
CAPN1-228ENST00000534373 LINC00477Q96M19 166 aa9.42□□□□□ -0.9
CAPN1-228ENST00000534373 PYGO2Q9BRQ0 406 aa9.42□□□□□ -0.9
CAPN1-228ENST00000534373 NOP10Q9NPE3 64 aaKnown RBP9.42□□□□□ -0.9
CAPN1-228ENST00000534373 DNAH17Q9UFH2 4485 aa9.41□□□□□ -0.9
CAPN1-228ENST00000534373 A0A1B0GVY2 172 aa9.41□□□□□ -0.9
CAPN1-228ENST00000534373 PRSS29PA6NIE9 313 aa9.41□□□□□ -0.9
CAPN1-228ENST00000534373 RTL8CO15255 209 aa9.41□□□□□ -0.9
CAPN1-228ENST00000534373 KIR3DS1Q14943 382 aa9.41□□□□□ -0.9
CAPN1-228ENST00000534373 LINC00612Q8N6U2 182 aa9.41□□□□□ -0.9
CAPN1-228ENST00000534373 ATG101Q9BSB4 218 aa9.41□□□□□ -0.9
CAPN1-228ENST00000534373 KCNIP2Q9NS61 270 aa9.41□□□□□ -0.9
CAPN1-228ENST00000534373 TIMM9Q9Y5J7 89 aa9.41□□□□□ -0.9
CAPN1-228ENST00000534373 IGLV2-18A0A075B6J9 118 aa9.4□□□□□ -0.9
CAPN1-228ENST00000534373 SNURFLB1AK76 121 aa9.4□□□□□ -0.9
CAPN1-228ENST00000534373 NDUFB4O95168 129 aa9.4□□□□□ -0.9
CAPN1-228ENST00000534373 SLC25A5P05141 298 aaKnown RBP9.4□□□□□ -0.9
CAPN1-228ENST00000534373 NMBP08949 121 aa9.4□□□□□ -0.9
CAPN1-228ENST00000534373 PRB4P10163 310 aaPredicted RBP9.4□□□□□ -0.9
CAPN1-228ENST00000534373 MARVELD1Q9BSK0 173 aa9.4□□□□□ -0.9
CAPN1-228ENST00000534373 PARD6GQ9BYG4 376 aaPredicted RBP9.4□□□□□ -0.9
CAPN1-228ENST00000534373 AAMDCQ9H7C9 122 aa9.4□□□□□ -0.9
CAPN1-228ENST00000534373 TRAV12-3A0A0B4J271 114 aa9.39□□□□□ -0.91
CAPN1-228ENST00000534373 H0YIZ8 118 aa9.39□□□□□ -0.91
CAPN1-228ENST00000534373 SSNA1O43805 119 aa9.39□□□□□ -0.91
CAPN1-228ENST00000534373 SIX6O95475 246 aa9.39□□□□□ -0.91
CAPN1-228ENST00000534373 CCL18P55774 89 aa9.39□□□□□ -0.91
CAPN1-228ENST00000534373 DAZ2Q13117 558 aaKnown RBP9.39□□□□□ -0.91
CAPN1-228ENST00000534373 C9orf47Q6ZRZ4 202 aa9.39□□□□□ -0.91
CAPN1-228ENST00000534373 THAP6Q8TBB0 222 aa9.39□□□□□ -0.91
CAPN1-228ENST00000534373 ZNF503Q96F45 646 aa9.39□□□□□ -0.91
CAPN1-228ENST00000534373 LINC00467Q9BRT7 94 aa9.39□□□□□ -0.91
CAPN1-228ENST00000534373 WDR61Q9GZS3 305 aaKnown RBP9.39□□□□□ -0.91
CAPN1-228ENST00000534373 OR5AC2Q9NZP5 309 aa9.39□□□□□ -0.91
CAPN1-228ENST00000534373 HERC2O95714 4834 aa9.39□□□□□ -0.91
CAPN1-228ENST00000534373 KLLNB2CW77 178 aa9.38□□□□□ -0.91
CAPN1-228ENST00000534373 C17orf112F2Z3M2 114 aa9.38□□□□□ -0.91
CAPN1-228ENST00000534373 H3BNG1 76 aa9.38□□□□□ -0.91
CAPN1-228ENST00000534373 M0R3E3 92 aa9.38□□□□□ -0.91
CAPN1-228ENST00000534373 NUDT3O95989 172 aa9.38□□□□□ -0.91
CAPN1-228ENST00000534373 PTTG1O95997 202 aa9.38□□□□□ -0.91
CAPN1-228ENST00000534373 NBEAP1P0C6P0 100 aa9.38□□□□□ -0.91
CAPN1-228ENST00000534373 PYYP10082 97 aa9.38□□□□□ -0.91
CAPN1-228ENST00000534373 LRRC37A5PQ49AS3 106 aa9.38□□□□□ -0.91
CAPN1-228ENST00000534373 GCSAMLQ5JQS6 135 aa9.38□□□□□ -0.91
CAPN1-228ENST00000534373 C1orf134Q5TEV5 83 aa9.38□□□□□ -0.91
CAPN1-228ENST00000534373 FAM167A-AS1Q96KT0 104 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms