RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 ZNF876PQ49A33 203 aa14.06□□□□□ -0.16
PHRF1-205ENST00000533464 C10orf91Q5T1B1 145 aa14.06□□□□□ -0.16
PHRF1-205ENST00000533464 RNF182Q8N6D2 247 aa14.06□□□□□ -0.16
PHRF1-205ENST00000533464 SYNJ2BPP57105 145 aa14.05□□□□□ -0.16
PHRF1-205ENST00000533464 LCNL1Q6ZST4 164 aa14.05□□□□□ -0.16
PHRF1-205ENST00000533464 DKK4Q9UBT3 224 aa14.05□□□□□ -0.16
PHRF1-205ENST00000533464 Q6ZSR3 168 aa14.05□□□□□ -0.16
PHRF1-205ENST00000533464 FNDC4Q9H6D8 234 aaPredicted RBP14.05□□□□□ -0.16
PHRF1-205ENST00000533464 SYS1-DBNDD2H3BUS1 97 aa14.05□□□□□ -0.16
PHRF1-205ENST00000533464 POU2AF1Q16633 256 aa14.05□□□□□ -0.16
PHRF1-205ENST00000533464 KRTAP27-1Q3LI81 207 aa14.05□□□□□ -0.16
PHRF1-205ENST00000533464 ZNF114Q8NC26 417 aa14.05□□□□□ -0.16
PHRF1-205ENST00000533464 GFRA4Q9GZZ7 299 aa14.05□□□□□ -0.16
PHRF1-205ENST00000533464 ATRXP46100 2492 aa14.04□□□□□ -0.16
PHRF1-205ENST00000533464 LINC01559Q495D7 138 aa14.04□□□□□ -0.16
PHRF1-205ENST00000533464 KLHL30-AS1Q8NEE0 82 aa14.04□□□□□ -0.16
PHRF1-205ENST00000533464 MCRIP2Q9BUT9 160 aaKnown RBP14.04□□□□□ -0.16
PHRF1-205ENST00000533464 SP5Q6BEB4 398 aaPredicted RBP14.04□□□□□ -0.16
PHRF1-205ENST00000533464 SPRNQ5BIV9 151 aa14.04□□□□□ -0.16
PHRF1-205ENST00000533464 ZNF664Q8N3J9 261 aa14.04□□□□□ -0.16
PHRF1-205ENST00000533464 SLX1AQ9BQ83 275 aa14.04□□□□□ -0.16
PHRF1-205ENST00000533464 IGHV3-64A0A075B6Q5 118 aa14.03□□□□□ -0.16
PHRF1-205ENST00000533464 LINC01549A6NIU2 74 aa14.03□□□□□ -0.16
PHRF1-205ENST00000533464 GUSBP1Q15486 140 aa14.03□□□□□ -0.16
PHRF1-205ENST00000533464 ZNF492Q9P255 531 aa14.03□□□□□ -0.16
PHRF1-205ENST00000533464 CTSZQ9UBR2 303 aa14.03□□□□□ -0.16
PHRF1-205ENST00000533464 A0A1W2PNU3 283 aaPredicted RBP14.03□□□□□ -0.16
PHRF1-205ENST00000533464 GRNP28799 593 aaKnown RBP14.03□□□□□ -0.16
PHRF1-205ENST00000533464 TMEM75Q8N9X5 138 aa14.03□□□□□ -0.16
PHRF1-205ENST00000533464 HSD52Q0P140 79 aa14.02□□□□□ -0.16
PHRF1-205ENST00000533464 Q0VG73 95 aa14.02□□□□□ -0.16
PHRF1-205ENST00000533464 TMEM158Q8WZ71 300 aa14.02□□□□□ -0.16
PHRF1-205ENST00000533464 COL4A3Q01955 1670 aa14.02□□□□□ -0.16
PHRF1-205ENST00000533464 TRAV2A0A0B4J234 112 aa14.02□□□□□ -0.16
PHRF1-205ENST00000533464 TMEM213A2RRL7 107 aa14.02□□□□□ -0.17
PHRF1-205ENST00000533464 SHISA9B4DS77 424 aa14.02□□□□□ -0.17
PHRF1-205ENST00000533464 C22orf46C9J442 243 aa14.02□□□□□ -0.17
PHRF1-205ENST00000533464 SCGB1A1P11684 91 aa14.02□□□□□ -0.17
PHRF1-205ENST00000533464 GATA3P23771 443 aa14.01□□□□□ -0.17
PHRF1-205ENST00000533464 IL17RELQ6ZVW7 336 aa14.01□□□□□ -0.17
PHRF1-205ENST00000533464 LINC00469Q8N7U9 141 aa14.01□□□□□ -0.17
PHRF1-205ENST00000533464 C8orf49Q96NF6 230 aa14.01□□□□□ -0.17
PHRF1-205ENST00000533464 CHCHD5Q9BSY4 110 aa14.01□□□□□ -0.17
PHRF1-205ENST00000533464 IGLC1P0CG04 106 aa14.01□□□□□ -0.17
PHRF1-205ENST00000533464 OR9G4Q8NGQ1 327 aa14.01□□□□□ -0.17
PHRF1-205ENST00000533464 C18orf32Q8TCD1 76 aa14.01□□□□□ -0.17
PHRF1-205ENST00000533464 CSTL1Q9H114 145 aa14.01□□□□□ -0.17
PHRF1-205ENST00000533464 VCYO14598 125 aa14.01□□□□□ -0.17
PHRF1-205ENST00000533464 NDUFS7O75251 213 aa14.01□□□□□ -0.17
PHRF1-205ENST00000533464 SEC11AP67812 179 aa14.01□□□□□ -0.17
PHRF1-205ENST00000533464 PRR20EP86478 221 aa14.01□□□□□ -0.17
PHRF1-205ENST00000533464 PRR20CP86479 221 aa14.01□□□□□ -0.17
PHRF1-205ENST00000533464 PRR20DP86480 221 aa14.01□□□□□ -0.17
PHRF1-205ENST00000533464 PRR20BP86481 221 aa14.01□□□□□ -0.17
PHRF1-205ENST00000533464 PRR20AP86496 221 aa14.01□□□□□ -0.17
PHRF1-205ENST00000533464 CSPG4Q6UVK1 2322 aa14.01□□□□□ -0.17
PHRF1-205ENST00000533464 A0A0U1RRA0 63 aa14□□□□□ -0.17
PHRF1-205ENST00000533464 A0A087WWL8 130 aa14□□□□□ -0.17
PHRF1-205ENST00000533464 TRGV1A0A0A0MS02 117 aa14□□□□□ -0.17
PHRF1-205ENST00000533464 FAM231BA6NCW3 169 aa14□□□□□ -0.17
PHRF1-205ENST00000533464 PCP4P48539 62 aa14□□□□□ -0.17
PHRF1-205ENST00000533464 SPRY4Q9C004 299 aa14□□□□□ -0.17
PHRF1-205ENST00000533464 V9GYV3 84 aa14□□□□□ -0.17
PHRF1-205ENST00000533464 TRBV7-9A0A0J9YWB2 115 aa14□□□□□ -0.17
PHRF1-205ENST00000533464 TCF15Q12870 199 aa14□□□□□ -0.17
PHRF1-205ENST00000533464 C2orf16Q68DN1 1984 aa14□□□□□ -0.17
PHRF1-205ENST00000533464 CT83Q5H943 113 aa14□□□□□ -0.17
PHRF1-205ENST00000533464 CFAP161Q6P656 301 aa13.99□□□□□ -0.17
PHRF1-205ENST00000533464 HOXA3O43365 443 aaPredicted RBP13.99□□□□□ -0.17
PHRF1-205ENST00000533464 OR2K2Q8NGT1 345 aa13.99□□□□□ -0.17
PHRF1-205ENST00000533464 PLNP26678 52 aa13.99□□□□□ -0.17
PHRF1-205ENST00000533464 ZNF415Q09FC8 603 aa13.99□□□□□ -0.17
PHRF1-205ENST00000533464 NCOA6Q14686 2063 aaPredicted RBP13.99□□□□□ -0.17
PHRF1-205ENST00000533464 UBE2E2Q96LR5 201 aa13.99□□□□□ -0.17
PHRF1-205ENST00000533464 LSM4Q9Y4Z0 139 aaKnown RBP13.99□□□□□ -0.17
PHRF1-205ENST00000533464 LHBP01229 141 aa13.98□□□□□ -0.17
PHRF1-205ENST00000533464 CMC4P56277 68 aaPredicted RBP13.98□□□□□ -0.17
PHRF1-205ENST00000533464 ZC2HC1BQ5TFG8 222 aa13.98□□□□□ -0.17
PHRF1-205ENST00000533464 DEFB131AP59861 70 aa13.98□□□□□ -0.17
PHRF1-205ENST00000533464 A0A087X0K7 114 aa13.98□□□□□ -0.17
PHRF1-205ENST00000533464 TNFRSF6BO95407 300 aa13.98□□□□□ -0.17
PHRF1-205ENST00000533464 DPH3Q96FX2 82 aa13.98□□□□□ -0.17
PHRF1-205ENST00000533464 H3BRN7 92 aa13.98□□□□□ -0.17
PHRF1-205ENST00000533464 IGHV3-53P01767 116 aa13.98□□□□□ -0.17
PHRF1-205ENST00000533464 MPV17L2Q567V2 206 aa13.98□□□□□ -0.17
PHRF1-205ENST00000533464 THAP8Q8NA92 274 aa13.98□□□□□ -0.17
PHRF1-205ENST00000533464 LYPD6BQ8NI32 183 aa13.98□□□□□ -0.17
PHRF1-205ENST00000533464 C11orf52Q96A22 123 aa13.98□□□□□ -0.17
PHRF1-205ENST00000533464 ADARB2-AS1A8MUL3 147 aa13.97□□□□□ -0.17
PHRF1-205ENST00000533464 BCL6BQ8N143 479 aaPredicted RBP13.97□□□□□ -0.17
PHRF1-205ENST00000533464 FXYD5Q96DB9 178 aa13.97□□□□□ -0.17
PHRF1-205ENST00000533464 NAA38Q9BRA0 125 aaKnown RBP13.97□□□□□ -0.17
PHRF1-205ENST00000533464 RPL35AP18077 110 aaKnown RBP13.97□□□□□ -0.17
PHRF1-205ENST00000533464 TTC32Q5I0X7 151 aa13.97□□□□□ -0.17
PHRF1-205ENST00000533464 Q5PR19 223 aa13.97□□□□□ -0.17
PHRF1-205ENST00000533464 FAM231DQ6ZW35 169 aa13.97□□□□□ -0.17
PHRF1-205ENST00000533464 ZNF479Q96JC4 524 aa13.97□□□□□ -0.17
PHRF1-205ENST00000533464 PRR25Q96S07 402 aa13.97□□□□□ -0.17
PHRF1-205ENST00000533464 TMEM14CQ9P0S9 112 aa13.97□□□□□ -0.17
PHRF1-205ENST00000533464 SSBP2P81877 361 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms