RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, human

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-222	ENST00000531551	RPUSD4	Q96CM3	377 aa	Known RBP	13.13	□□□□□ -0.31
CTSB-222	ENST00000531551	MANBAL	Q9NQG1	85 aa		13.13	□□□□□ -0.31
CTSB-222	ENST00000531551	CLEC5A	Q9NY25	188 aa		13.13	□□□□□ -0.31
CTSB-222	ENST00000531551	GGTLC3	B5MD39	225 aa		13.12	□□□□□ -0.31
CTSB-222	ENST00000531551		F6UB75	175 aa		13.12	□□□□□ -0.31
CTSB-222	ENST00000531551	CSN1S1	P47710	185 aa		13.12	□□□□□ -0.31
CTSB-222	ENST00000531551	ATP5G3	P48201	142 aa		13.12	□□□□□ -0.31
CTSB-222	ENST00000531551	DEFB125	Q8N687	156 aa		13.12	□□□□□ -0.31
CTSB-222	ENST00000531551	MGAM2	Q2M2H8	2515 aa		13.12	□□□□□ -0.31
CTSB-222	ENST00000531551	KNCN	A6PVL3	124 aa		13.12	□□□□□ -0.31
CTSB-222	ENST00000531551	PRELID1	Q9Y255	219 aa		13.12	□□□□□ -0.31
CTSB-222	ENST00000531551	PRAC2	D3DTV9	90 aa		13.11	□□□□□ -0.31
CTSB-222	ENST00000531551	ZNF705D	P0CH99	300 aa	Predicted RBP	13.11	□□□□□ -0.31
CTSB-222	ENST00000531551	ZNF705B	P0CI00	300 aa	Predicted RBP	13.11	□□□□□ -0.31
CTSB-222	ENST00000531551	GNG5	P63218	68 aa		13.11	□□□□□ -0.31
CTSB-222	ENST00000531551	ACTL10	Q5JWF8	245 aa		13.11	□□□□□ -0.31
CTSB-222	ENST00000531551	C19orf73	Q9NVV2	129 aa		13.11	□□□□□ -0.31
CTSB-222	ENST00000531551	C11orf94	C9JXX5	98 aa		13.1	□□□□□ -0.31
CTSB-222	ENST00000531551	CLLU1	Q5K131	121 aa		13.1	□□□□□ -0.31
CTSB-222	ENST00000531551	EBLN2	Q6P2I7	272 aa		13.1	□□□□□ -0.31
CTSB-222	ENST00000531551		Q8N1Y9	231 aa		13.1	□□□□□ -0.31
CTSB-222	ENST00000531551	NKX6-2	Q9C056	277 aa	Predicted RBP	13.1	□□□□□ -0.31
CTSB-222	ENST00000531551	RGS13	O14921	159 aa		13.1	□□□□□ -0.31
CTSB-222	ENST00000531551	BCL2	P10415	239 aa		13.1	□□□□□ -0.31
CTSB-222	ENST00000531551	GDF5OS	Q5U4N7	250 aa		13.1	□□□□□ -0.31
CTSB-222	ENST00000531551	RXFP4	Q8TDU9	374 aa		13.1	□□□□□ -0.31
CTSB-222	ENST00000531551	MRPL53	Q96EL3	112 aa	Known RBP	13.1	□□□□□ -0.31
CTSB-222	ENST00000531551	RARRES2	Q99969	163 aa		13.1	□□□□□ -0.31
CTSB-222	ENST00000531551	EIF5A2	Q9GZV4	153 aa	Known RBP	13.1	□□□□□ -0.31
CTSB-222	ENST00000531551	ARL2-SNX15	V9GYD0	113 aa		13.1	□□□□□ -0.31
CTSB-222	ENST00000531551	DNAH3	Q8TD57	4116 aa		13.09	□□□□□ -0.31
CTSB-222	ENST00000531551	IGKV3-20	P01619	116 aa		13.09	□□□□□ -0.31
CTSB-222	ENST00000531551	HIST1H1A	Q02539	215 aa	Predicted RBP	13.09	□□□□□ -0.31
CTSB-222	ENST00000531551	KPRP	Q5T749	579 aa	Predicted RBP	13.09	□□□□□ -0.31
CTSB-222	ENST00000531551	C5orf17	Q8NAS9	161 aa		13.09	□□□□□ -0.31
CTSB-222	ENST00000531551	FAM110A	Q9BQ89	295 aa		13.09	□□□□□ -0.31
CTSB-222	ENST00000531551	SORL1	Q92673	2214 aa		13.08	□□□□□ -0.31
CTSB-222	ENST00000531551	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.08	□□□□□ -0.32
CTSB-222	ENST00000531551	RBFOX3	A6NFN3	312 aa		13.08	□□□□□ -0.32
CTSB-222	ENST00000531551	IGKV2D-40	P01614	121 aa	Predicted RBP	13.08	□□□□□ -0.32
CTSB-222	ENST00000531551	TOR2A	Q5JU69	321 aa		13.08	□□□□□ -0.32
CTSB-222	ENST00000531551	FOXI2	Q6ZQN5	318 aa		13.08	□□□□□ -0.32
CTSB-222	ENST00000531551	OR4B1	Q8NGF8	309 aa		13.08	□□□□□ -0.32
CTSB-222	ENST00000531551	SAV1	Q9H4B6	383 aa	Predicted RBP	13.08	□□□□□ -0.32
CTSB-222	ENST00000531551	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	13.08	□□□□□ -0.32
CTSB-222	ENST00000531551	EPDR1	Q9UM22	224 aa		13.08	□□□□□ -0.32
CTSB-222	ENST00000531551	DIRC3	C9JPN6	131 aa		13.08	□□□□□ -0.32
CTSB-222	ENST00000531551	PMS2P11	Q13670	270 aa		13.08	□□□□□ -0.32
CTSB-222	ENST00000531551	GOLT1A	Q6ZVE7	132 aa		13.08	□□□□□ -0.32
CTSB-222	ENST00000531551	STH	Q8IWL8	128 aa		13.08	□□□□□ -0.32
CTSB-222	ENST00000531551	OR8A1	Q8NGG7	326 aa		13.08	□□□□□ -0.32
CTSB-222	ENST00000531551	OR10J6P	Q8NGY7	276 aa		13.08	□□□□□ -0.32
CTSB-222	ENST00000531551	CITED4	Q96RK1	184 aa		13.08	□□□□□ -0.32
CTSB-222	ENST00000531551	TUBA4B	Q9H853	241 aa		13.08	□□□□□ -0.32
CTSB-222	ENST00000531551	SRD5A3	Q9H8P0	318 aa		13.08	□□□□□ -0.32
CTSB-222	ENST00000531551	VAX2	Q9UIW0	290 aa		13.08	□□□□□ -0.32
CTSB-222	ENST00000531551	LOC102723971	A0A1B0GUV8	181 aa		13.07	□□□□□ -0.32
CTSB-222	ENST00000531551	MEF2B	Q02080	365 aa	Predicted RBP	13.07	□□□□□ -0.32
CTSB-222	ENST00000531551	FAM210A	Q96ND0	272 aa		13.07	□□□□□ -0.32
CTSB-222	ENST00000531551		A0A0J9YX75	114 aa		13.06	□□□□□ -0.32
CTSB-222	ENST00000531551	TCRA	P04437	139 aa		13.06	□□□□□ -0.32
CTSB-222	ENST00000531551	CNN1	P51911	297 aa	Known RBP	13.06	□□□□□ -0.32
CTSB-222	ENST00000531551	ERCC8	Q13216	396 aa		13.06	□□□□□ -0.32
CTSB-222	ENST00000531551	CCDC28A	Q8IWP9	274 aa		13.06	□□□□□ -0.32
CTSB-222	ENST00000531551	SGK494	Q96LW2	274 aa		13.06	□□□□□ -0.32
CTSB-222	ENST00000531551	TAGLN2	P37802	199 aa	Known RBP	13.06	□□□□□ -0.32
CTSB-222	ENST00000531551	SCO2	A0A1W2PP80	73 aa		13.05	□□□□□ -0.32
CTSB-222	ENST00000531551		F6UZH7	168 aa		13.05	□□□□□ -0.32
CTSB-222	ENST00000531551	PEX7	O00628	323 aa		13.05	□□□□□ -0.32
CTSB-222	ENST00000531551	IGHV4-30-4	P0DP06	118 aa		13.05	□□□□□ -0.32
CTSB-222	ENST00000531551	HLA-DRB4	P13762	266 aa		13.05	□□□□□ -0.32
CTSB-222	ENST00000531551	RPL35A	P18077	110 aa	Known RBP	13.05	□□□□□ -0.32
CTSB-222	ENST00000531551	VGLL1	Q99990	258 aa		13.05	□□□□□ -0.32
CTSB-222	ENST00000531551	ATG101	Q9BSB4	218 aa		13.05	□□□□□ -0.32
CTSB-222	ENST00000531551	HLA-DRB4	X5D2U9	266 aa		13.05	□□□□□ -0.32
CTSB-222	ENST00000531551		H3BMM0	161 aa		13.04	□□□□□ -0.32
CTSB-222	ENST00000531551		K7EQM0	130 aa		13.04	□□□□□ -0.32
CTSB-222	ENST00000531551	DUSP14	O95147	198 aa	Known RBP	13.04	□□□□□ -0.32
CTSB-222	ENST00000531551	CYB561D1	Q8N8Q1	229 aa		13.04	□□□□□ -0.32
CTSB-222	ENST00000531551	HIST1H2BA	Q96A08	127 aa		13.04	□□□□□ -0.32
CTSB-222	ENST00000531551	LINC00479	Q96M42	142 aa		13.04	□□□□□ -0.32
CTSB-222	ENST00000531551	TXNDC17	Q9BRA2	123 aa		13.04	□□□□□ -0.32
CTSB-222	ENST00000531551	PPP1R14D	Q9NXH3	145 aa		13.04	□□□□□ -0.32
CTSB-222	ENST00000531551	NOTCH1	P46531	2555 aa		13.04	□□□□□ -0.32
CTSB-222	ENST00000531551	TRAV8-1	A0A0A6YYK1	113 aa		13.04	□□□□□ -0.32
CTSB-222	ENST00000531551	ZNF506	Q5JVG8	444 aa		13.04	□□□□□ -0.32
CTSB-222	ENST00000531551	TMEM78	Q5T7P6	136 aa		13.04	□□□□□ -0.32
CTSB-222	ENST00000531551	TRAV34	A0A0B4J273	112 aa		13.03	□□□□□ -0.32
CTSB-222	ENST00000531551	CEBPG	P53567	150 aa		13.03	□□□□□ -0.32
CTSB-222	ENST00000531551	DEFB121	Q5J5C9	76 aa		13.03	□□□□□ -0.32
CTSB-222	ENST00000531551	ASCL2	Q99929	193 aa		13.03	□□□□□ -0.32
CTSB-222	ENST00000531551	PDE6D	O43924	150 aa		13.02	□□□□□ -0.32
CTSB-222	ENST00000531551	AKR1C3	P42330	323 aa		13.02	□□□□□ -0.32
CTSB-222	ENST00000531551	ARL6IP6	Q8N6S5	226 aa		13.02	□□□□□ -0.32
CTSB-222	ENST00000531551	TCEAL7	Q9BRU2	100 aa		13.02	□□□□□ -0.32
CTSB-222	ENST00000531551	AGPAT4-IT1	Q9H0P7	198 aa		13.02	□□□□□ -0.32
CTSB-222	ENST00000531551	MED9	Q9NWA0	146 aa		13.02	□□□□□ -0.32
CTSB-222	ENST00000531551	NBEAL1	Q6ZS30	2694 aa		13.02	□□□□□ -0.33
CTSB-222	ENST00000531551	SERTM2	A0A1B0GWG4	89 aa		13.02	□□□□□ -0.33
CTSB-222	ENST00000531551		K7EIL1	84 aa		13.02	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms