RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 IGLC2P0DOY2 106 aa13.56□□□□□ -0.24
GMDS-208ENST00000530927 FFAR4Q5NUL3 377 aa13.56□□□□□ -0.24
GMDS-208ENST00000530927 SAMD13Q5VXD3 122 aa13.56□□□□□ -0.24
GMDS-208ENST00000530927 SH3BGRL3Q9H299 93 aa13.56□□□□□ -0.24
GMDS-208ENST00000530927 CXorf65A6NEN9 183 aa13.55□□□□□ -0.24
GMDS-208ENST00000530927 ZNF705FA8MVS1 300 aaPredicted RBP13.55□□□□□ -0.24
GMDS-208ENST00000530927 CNN1P51911 297 aaKnown RBP13.55□□□□□ -0.24
GMDS-208ENST00000530927 NANOS2P60321 138 aaKnown RBP13.55□□□□□ -0.24
GMDS-208ENST00000530927 AMTNQ6UX39 209 aa13.55□□□□□ -0.24
GMDS-208ENST00000530927 BPIFA4PQ86YQ2 179 aa13.55□□□□□ -0.24
GMDS-208ENST00000530927 LRRC20Q8TCA0 184 aa13.55□□□□□ -0.24
GMDS-208ENST00000530927 MBP02144 154 aa13.54□□□□□ -0.24
GMDS-208ENST00000530927 SEC11BP0C7V7 166 aa13.54□□□□□ -0.24
GMDS-208ENST00000530927 NUTF2P61970 127 aaKnown RBP13.54□□□□□ -0.24
GMDS-208ENST00000530927 PSG9Q00887 426 aa13.54□□□□□ -0.24
GMDS-208ENST00000530927 ACOT6Q3I5F7 207 aaPredicted RBP13.54□□□□□ -0.24
GMDS-208ENST00000530927 TMEM41BQ5BJD5 291 aa13.54□□□□□ -0.24
GMDS-208ENST00000530927 C11orf68Q9H3H3 251 aaKnown RBP13.54□□□□□ -0.24
GMDS-208ENST00000530927 ZNF331Q9NQX6 463 aaPredicted RBP13.54□□□□□ -0.24
GMDS-208ENST00000530927 ZNF586Q9NXT0 402 aa13.54□□□□□ -0.24
GMDS-208ENST00000530927 IGHV3OR16-12A0A075B7B8 117 aa13.53□□□□□ -0.24
GMDS-208ENST00000530927 EIF3GO75821 320 aaKnown RBP eCLIP13.53□□□□□ -0.24
GMDS-208ENST00000530927 PYYP10082 97 aa13.53□□□□□ -0.24
GMDS-208ENST00000530927 PSG3Q16557 428 aa13.53□□□□□ -0.24
GMDS-208ENST00000530927 EIF5AL1Q6IS14 154 aaKnown RBP13.53□□□□□ -0.24
GMDS-208ENST00000530927 MIR17HGQ75NE6 70 aa13.53□□□□□ -0.24
GMDS-208ENST00000530927 RNF24Q9Y225 148 aa13.53□□□□□ -0.24
GMDS-208ENST00000530927 A8MTW9 85 aa13.52□□□□□ -0.25
GMDS-208ENST00000530927 PRAC2D3DTV9 90 aa13.52□□□□□ -0.25
GMDS-208ENST00000530927 M0R2Z0 102 aa13.52□□□□□ -0.25
GMDS-208ENST00000530927 M6PRP20645 277 aa13.52□□□□□ -0.25
GMDS-208ENST00000530927 HIST1H1AQ02539 215 aaPredicted RBP13.52□□□□□ -0.25
GMDS-208ENST00000530927 LCN15Q6UWW0 184 aa13.52□□□□□ -0.25
GMDS-208ENST00000530927 SAT2Q96F10 170 aaPredicted RBP13.52□□□□□ -0.25
GMDS-208ENST00000530927 SLC25A2Q9BXI2 301 aa13.52□□□□□ -0.25
GMDS-208ENST00000530927 HRH4Q9H3N8 390 aa13.52□□□□□ -0.25
GMDS-208ENST00000530927 SPINK13Q1W4C9 94 aa13.51□□□□□ -0.25
GMDS-208ENST00000530927 C1orf158Q8N1D5 194 aa13.51□□□□□ -0.25
GMDS-208ENST00000530927 OR8A1Q8NGG7 326 aa13.51□□□□□ -0.25
GMDS-208ENST00000530927 RPUSD4Q96CM3 377 aaKnown RBP13.51□□□□□ -0.25
GMDS-208ENST00000530927 CLUHP3Q96NS8 147 aa13.51□□□□□ -0.25
GMDS-208ENST00000530927 C1QTNF4Q9BXJ3 329 aa13.51□□□□□ -0.25
GMDS-208ENST00000530927 DNAH1Q9P2D7 4330 aa13.51□□□□□ -0.25
GMDS-208ENST00000530927 PRM2P04554 102 aa13.5□□□□□ -0.25
GMDS-208ENST00000530927 MIFP14174 115 aa13.5□□□□□ -0.25
GMDS-208ENST00000530927 AKR1C8PQ5T2L2 129 aa13.5□□□□□ -0.25
GMDS-208ENST00000530927 ZNF705AQ6ZN79 300 aaPredicted RBP13.5□□□□□ -0.25
GMDS-208ENST00000530927 OR10G4Q8NGN3 311 aa13.5□□□□□ -0.25
GMDS-208ENST00000530927 OR10G9Q8NGN4 311 aa13.5□□□□□ -0.25
GMDS-208ENST00000530927 OR10G7Q8NGN6 311 aa13.5□□□□□ -0.25
GMDS-208ENST00000530927 C11orf45Q8TAV5 145 aa13.5□□□□□ -0.25
GMDS-208ENST00000530927 PHYHIPLQ96FC7 376 aa13.5□□□□□ -0.25
GMDS-208ENST00000530927 FAM167A-AS1Q96KT0 104 aa13.5□□□□□ -0.25
GMDS-208ENST00000530927 MRPL32Q9BYC8 188 aaKnown RBP13.5□□□□□ -0.25
GMDS-208ENST00000530927 CELA1Q9UNI1 258 aa13.5□□□□□ -0.25
GMDS-208ENST00000530927 ALMS1Q8TCU4 4167 aa13.5□□□□□ -0.25
GMDS-208ENST00000530927 RYR2Q92736 4967 aa13.49□□□□□ -0.25
GMDS-208ENST00000530927 UMAD1C9J7I0 102 aa13.49□□□□□ -0.25
GMDS-208ENST00000530927 RAB2AP61019 212 aa13.49□□□□□ -0.25
GMDS-208ENST00000530927 RHOBP62745 196 aa13.49□□□□□ -0.25
GMDS-208ENST00000530927 TMED6Q8WW62 240 aa13.49□□□□□ -0.25
GMDS-208ENST00000530927 TRAV12-2A0A075B6T6 113 aa13.48□□□□□ -0.25
GMDS-208ENST00000530927 A0A1W2PPV4 95 aa13.48□□□□□ -0.25
GMDS-208ENST00000530927 CRXO43186 299 aaPredicted RBP13.48□□□□□ -0.25
GMDS-208ENST00000530927 NDUFB4O95168 129 aa13.48□□□□□ -0.25
GMDS-208ENST00000530927 BLNKQ8WV28 456 aa13.48□□□□□ -0.25
GMDS-208ENST00000530927 SLC50A1Q9BRV3 221 aa13.48□□□□□ -0.25
GMDS-208ENST00000530927 FUT9Q9Y231 359 aa13.48□□□□□ -0.25
GMDS-208ENST00000530927 LCE6AA0A183 80 aa13.47□□□□□ -0.25
GMDS-208ENST00000530927 DUSP14O95147 198 aaKnown RBP13.47□□□□□ -0.25
GMDS-208ENST00000530927 PHLDA1Q8WV24 401 aaPredicted RBP13.47□□□□□ -0.25
GMDS-208ENST00000530927 TMEM14CQ9P0S9 112 aa13.47□□□□□ -0.25
GMDS-208ENST00000530927 TRBV19A0A075B6N1 114 aa13.47□□□□□ -0.25
GMDS-208ENST00000530927 M0R3E3 92 aa13.47□□□□□ -0.25
GMDS-208ENST00000530927 EMP1P54849 157 aa13.47□□□□□ -0.25
GMDS-208ENST00000530927 KIR3DS1Q14943 382 aa13.47□□□□□ -0.25
GMDS-208ENST00000530927 FAM122CQ6P4D5 195 aa13.47□□□□□ -0.25
GMDS-208ENST00000530927 CEMP1Q6PRD7 247 aaPredicted RBP13.47□□□□□ -0.25
GMDS-208ENST00000530927 COMMD7Q86VX2 200 aa13.47□□□□□ -0.25
GMDS-208ENST00000530927 RPP25LQ8N5L8 163 aaKnown RBP13.47□□□□□ -0.25
GMDS-208ENST00000530927 ACTR3CQ9C0K3 210 aaPredicted RBP13.47□□□□□ -0.25
GMDS-208ENST00000530927 OR10J4P0C629 311 aa13.46□□□□□ -0.26
GMDS-208ENST00000530927 CDC34P49427 236 aaPredicted RBP13.46□□□□□ -0.26
GMDS-208ENST00000530927 RAB5CP51148 216 aa13.46□□□□□ -0.26
GMDS-208ENST00000530927 DPPA3Q6W0C5 159 aa13.46□□□□□ -0.26
GMDS-208ENST00000530927 CCDC28AQ8IWP9 274 aa13.46□□□□□ -0.26
GMDS-208ENST00000530927 EXOC3-AS1Q8N2X6 119 aa13.46□□□□□ -0.26
GMDS-208ENST00000530927 ZNF503Q96F45 646 aa13.46□□□□□ -0.26
GMDS-208ENST00000530927 PLA2G2EQ9NZK7 142 aa13.46□□□□□ -0.26
GMDS-208ENST00000530927 HIST1H1EP10412 219 aaKnown RBP13.45□□□□□ -0.26
GMDS-208ENST00000530927 TAS2R45P59539 299 aa13.45□□□□□ -0.26
GMDS-208ENST00000530927 EIF4E3Q8N5X7 224 aaKnown RBP13.45□□□□□ -0.26
GMDS-208ENST00000530927 IGF2BP2-AS1Q96M15 143 aa13.45□□□□□ -0.26
GMDS-208ENST00000530927 HYDINQ4G0P3 5121 aa13.45□□□□□ -0.26
GMDS-208ENST00000530927 NUPR2A6NF83 97 aa13.44□□□□□ -0.26
GMDS-208ENST00000530927 NMBP08949 121 aa13.44□□□□□ -0.26
GMDS-208ENST00000530927 GUK1Q16774 197 aa13.44□□□□□ -0.26
GMDS-208ENST00000530927 RAB24Q969Q5 203 aa13.44□□□□□ -0.26
GMDS-208ENST00000530927 FXYD5Q96DB9 178 aa13.44□□□□□ -0.26
GMDS-208ENST00000530927 OR51M1Q9H341 326 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms