RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 PRAC2D3DTV9 90 aa10.81□□□□□ -0.68
CHMP4A-203ENST00000527154 CTDSPLO15194 276 aa10.81□□□□□ -0.68
CHMP4A-203ENST00000527154 ANXA3P12429 323 aa10.81□□□□□ -0.68
CHMP4A-203ENST00000527154 SRPXP78539 464 aa10.81□□□□□ -0.68
CHMP4A-203ENST00000527154 FHL2Q14192 279 aa10.81□□□□□ -0.68
CHMP4A-203ENST00000527154 DIRAS2Q96HU8 199 aa10.81□□□□□ -0.68
CHMP4A-203ENST00000527154 MCUBQ9NWR8 336 aa10.81□□□□□ -0.68
CHMP4A-203ENST00000527154 PAIP2BQ9ULR5 123 aaKnown RBP10.81□□□□□ -0.68
CHMP4A-203ENST00000527154 HIGD1AQ9Y241 93 aa10.81□□□□□ -0.68
CHMP4A-203ENST00000527154 LINC00854A0A1B0GVQ3 168 aa10.8□□□□□ -0.68
CHMP4A-203ENST00000527154 ANKRD20A5PA0PJZ0 165 aa10.8□□□□□ -0.68
CHMP4A-203ENST00000527154 CT45A10P0DMU9 189 aa10.8□□□□□ -0.68
CHMP4A-203ENST00000527154 IAPPP10997 89 aa10.8□□□□□ -0.68
CHMP4A-203ENST00000527154 LCN15Q6UWW0 184 aa10.8□□□□□ -0.68
CHMP4A-203ENST00000527154 LRTM2Q8N967 370 aa10.8□□□□□ -0.68
CHMP4A-203ENST00000527154 VGLL1Q99990 258 aa10.8□□□□□ -0.68
CHMP4A-203ENST00000527154 SLC50A1Q9BRV3 221 aa10.8□□□□□ -0.68
CHMP4A-203ENST00000527154 CCDC59Q9P031 241 aaKnown RBP10.8□□□□□ -0.68
CHMP4A-203ENST00000527154 TRGV1A0A0A0MS02 117 aa10.79□□□□□ -0.68
CHMP4A-203ENST00000527154 TRAV12-3A0A0B4J271 114 aa10.79□□□□□ -0.68
CHMP4A-203ENST00000527154 CRYGDP07320 174 aa10.79□□□□□ -0.68
CHMP4A-203ENST00000527154 TCL1AP56279 114 aa10.79□□□□□ -0.68
CHMP4A-203ENST00000527154 RAP2BP61225 183 aa10.79□□□□□ -0.68
CHMP4A-203ENST00000527154 CYP2G1PQ6ZSU1 146 aa10.79□□□□□ -0.68
CHMP4A-203ENST00000527154 RABL2AQ9UBK7 228 aaPredicted RBP10.79□□□□□ -0.68
CHMP4A-203ENST00000527154 RABL2BQ9UNT1 228 aa10.79□□□□□ -0.68
CHMP4A-203ENST00000527154 HHLA3Q9XRX5 114 aa10.79□□□□□ -0.68
CHMP4A-203ENST00000527154 PMS2P5A8MQ11 134 aa10.78□□□□□ -0.68
CHMP4A-203ENST00000527154 K7EQD1 137 aa10.78□□□□□ -0.68
CHMP4A-203ENST00000527154 HYPMO75409 117 aa10.78□□□□□ -0.68
CHMP4A-203ENST00000527154 SPCS2Q15005 226 aa10.78□□□□□ -0.68
CHMP4A-203ENST00000527154 IBA57Q5T440 356 aaKnown RBP10.78□□□□□ -0.68
CHMP4A-203ENST00000527154 PATE2Q6UY27 113 aa10.78□□□□□ -0.68
CHMP4A-203ENST00000527154 CCDC190Q86UF4 302 aa10.78□□□□□ -0.68
CHMP4A-203ENST00000527154 MRPL32Q9BYC8 188 aaKnown RBP10.78□□□□□ -0.68
CHMP4A-203ENST00000527154 KLF12Q9Y4X4 402 aa10.78□□□□□ -0.68
CHMP4A-203ENST00000527154 PIGBOS1A0A0B4J2F0 54 aa10.77□□□□□ -0.69
CHMP4A-203ENST00000527154 IBA57-AS1B1ANH7 110 aa10.77□□□□□ -0.69
CHMP4A-203ENST00000527154 KLLNB2CW77 178 aa10.77□□□□□ -0.69
CHMP4A-203ENST00000527154 K7EPK0 472 aa10.77□□□□□ -0.69
CHMP4A-203ENST00000527154 PRAF2O60831 178 aa10.77□□□□□ -0.69
CHMP4A-203ENST00000527154 SLC25A6P12236 298 aa10.77□□□□□ -0.69
CHMP4A-203ENST00000527154 ZNF415Q09FC8 603 aa10.77□□□□□ -0.69
CHMP4A-203ENST00000527154 SCXQ7RTU7 201 aa10.77□□□□□ -0.69
CHMP4A-203ENST00000527154 IQCF2Q8IXL9 164 aa10.77□□□□□ -0.69
CHMP4A-203ENST00000527154 FAM19A4Q96LR4 140 aa10.77□□□□□ -0.69
CHMP4A-203ENST00000527154 DUXBA0A1W2PPF3 345 aa10.76□□□□□ -0.69
CHMP4A-203ENST00000527154 SLC25A5P05141 298 aaKnown RBP10.76□□□□□ -0.69
CHMP4A-203ENST00000527154 LINC00869P0C866 280 aa10.76□□□□□ -0.69
CHMP4A-203ENST00000527154 LEPP41159 167 aa10.76□□□□□ -0.69
CHMP4A-203ENST00000527154 SELENOTP62341 195 aa10.76□□□□□ -0.69
CHMP4A-203ENST00000527154 EIF4E3Q8N5X7 224 aaKnown RBP10.76□□□□□ -0.69
CHMP4A-203ENST00000527154 LRRC20Q8TCA0 184 aa10.76□□□□□ -0.69
CHMP4A-203ENST00000527154 DYNC2LI1Q8TCX1 351 aa10.76□□□□□ -0.69
CHMP4A-203ENST00000527154 SAT2Q96F10 170 aaPredicted RBP10.76□□□□□ -0.69
CHMP4A-203ENST00000527154 CIB3Q96Q77 187 aaPredicted RBP10.76□□□□□ -0.69
CHMP4A-203ENST00000527154 RSL24D1Q9UHA3 163 aaKnown RBP10.76□□□□□ -0.69
CHMP4A-203ENST00000527154 TRAV5A0A0B4J249 113 aa10.75□□□□□ -0.69
CHMP4A-203ENST00000527154 H3BMQ9 156 aa10.75□□□□□ -0.69
CHMP4A-203ENST00000527154 SLC17A3O00476 420 aa10.75□□□□□ -0.69
CHMP4A-203ENST00000527154 PSCAO43653 123 aa10.75□□□□□ -0.69
CHMP4A-203ENST00000527154 MED6O75586 246 aa10.75□□□□□ -0.69
CHMP4A-203ENST00000527154 IL5P05113 134 aa10.75□□□□□ -0.69
CHMP4A-203ENST00000527154 TIRAPP58753 221 aa10.75□□□□□ -0.69
CHMP4A-203ENST00000527154 RPP30P78346 268 aaKnown RBP10.75□□□□□ -0.69
CHMP4A-203ENST00000527154 AKR1C1Q04828 323 aa10.75□□□□□ -0.69
CHMP4A-203ENST00000527154 LINC01556Q5JQF7 62 aa10.75□□□□□ -0.69
CHMP4A-203ENST00000527154 C8orf49Q96NF6 230 aa10.75□□□□□ -0.69
CHMP4A-203ENST00000527154 RNF24Q9Y225 148 aa10.75□□□□□ -0.69
CHMP4A-203ENST00000527154 WRBO00258 174 aa10.74□□□□□ -0.69
CHMP4A-203ENST00000527154 MT1HL1P0DM35 61 aa10.74□□□□□ -0.69
CHMP4A-203ENST00000527154 IGLC2P0DOY2 106 aa10.74□□□□□ -0.69
CHMP4A-203ENST00000527154 ARV1Q9H2C2 271 aa10.74□□□□□ -0.69
CHMP4A-203ENST00000527154 RCL1Q9Y2P8 373 aaKnown RBP10.74□□□□□ -0.69
CHMP4A-203ENST00000527154 C7orf71A4D174 169 aa10.73□□□□□ -0.69
CHMP4A-203ENST00000527154 IGHV3-53P01767 116 aa10.73□□□□□ -0.69
CHMP4A-203ENST00000527154 OR5G3P0C626 314 aa10.73□□□□□ -0.69
CHMP4A-203ENST00000527154 VAMP1P23763 118 aa10.73□□□□□ -0.69
CHMP4A-203ENST00000527154 SRIP30626 198 aa10.73□□□□□ -0.69
CHMP4A-203ENST00000527154 WFDC2Q14508 124 aa10.73□□□□□ -0.69
CHMP4A-203ENST00000527154 TMEM128Q5BJH2 165 aa10.73□□□□□ -0.69
CHMP4A-203ENST00000527154 S100A7AQ86SG5 101 aa10.73□□□□□ -0.69
CHMP4A-203ENST00000527154 IGHV3-38A0A0C4DH36 116 aa10.72□□□□□ -0.69
CHMP4A-203ENST00000527154 J3KRW8 73 aa10.72□□□□□ -0.69
CHMP4A-203ENST00000527154 SYNGR2O43760 224 aa10.72□□□□□ -0.69
CHMP4A-203ENST00000527154 FAUP35544 74 aaKnown RBP10.72□□□□□ -0.69
CHMP4A-203ENST00000527154 SPANXN5Q5MJ07 72 aa10.72□□□□□ -0.69
CHMP4A-203ENST00000527154 PXMP4Q9Y6I8 212 aa10.72□□□□□ -0.69
CHMP4A-203ENST00000527154 FABP12A6NFH5 140 aa10.71□□□□□ -0.69
CHMP4A-203ENST00000527154 H3BP45 60 aa10.71□□□□□ -0.69
CHMP4A-203ENST00000527154 ORM1P02763 201 aa10.71□□□□□ -0.69
CHMP4A-203ENST00000527154 ASAH1Q13510 395 aa10.71□□□□□ -0.69
CHMP4A-203ENST00000527154 PXDC1Q5TGL8 231 aa10.71□□□□□ -0.69
CHMP4A-203ENST00000527154 CHAC1Q9BUX1 264 aa10.71□□□□□ -0.69
CHMP4A-203ENST00000527154 SLIRPQ9GZT3 109 aaKnown RBP10.71□□□□□ -0.69
CHMP4A-203ENST00000527154 MRPL16Q9NX20 251 aaKnown RBP10.71□□□□□ -0.69
CHMP4A-203ENST00000527154 SMCO3A2RU48 225 aa10.7□□□□□ -0.7
CHMP4A-203ENST00000527154 CCDC160A6NGH7 325 aa10.7□□□□□ -0.7
CHMP4A-203ENST00000527154 FNDC10F2Z333 226 aa10.7□□□□□ -0.7
CHMP4A-203ENST00000527154 H3BQ15 152 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 204 ms