RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 PSENENQ9NZ42 101 aa10.01□□□□□ -0.81
CSTF3-204ENST00000524556 LINC00854A0A1B0GVQ3 168 aa10□□□□□ -0.81
CSTF3-204ENST00000524556 SLC17A3O00476 420 aa10□□□□□ -0.81
CSTF3-204ENST00000524556 PAX4O43316 350 aa10□□□□□ -0.81
CSTF3-204ENST00000524556 SMIM18P0DKX4 95 aa10□□□□□ -0.81
CSTF3-204ENST00000524556 GCSHP23434 173 aa10□□□□□ -0.81
CSTF3-204ENST00000524556 FAUP35544 74 aaKnown RBP10□□□□□ -0.81
CSTF3-204ENST00000524556 RRAS2P62070 204 aaPredicted RBP10□□□□□ -0.81
CSTF3-204ENST00000524556 POLR2GP62487 172 aaKnown RBP eCLIP10□□□□□ -0.81
CSTF3-204ENST00000524556 PPP1R1AQ13522 171 aa10□□□□□ -0.81
CSTF3-204ENST00000524556 BPIFA4PQ86YQ2 179 aa10□□□□□ -0.81
CSTF3-204ENST00000524556 C11orf72Q8NBR9 251 aa10□□□□□ -0.81
CSTF3-204ENST00000524556 ZNF680Q8NEM1 530 aa10□□□□□ -0.81
CSTF3-204ENST00000524556 SOSTQ9BQB4 213 aa10□□□□□ -0.81
CSTF3-204ENST00000524556 FUT9Q9Y231 359 aa10□□□□□ -0.81
CSTF3-204ENST00000524556 PXMP4Q9Y6I8 212 aa10□□□□□ -0.81
CSTF3-204ENST00000524556 ICOSQ9Y6W8 199 aa10□□□□□ -0.81
CSTF3-204ENST00000524556 TRAV9-2A0A087WT02 112 aa9.99□□□□□ -0.81
CSTF3-204ENST00000524556 TRGV1A0A0A0MS02 117 aa9.99□□□□□ -0.81
CSTF3-204ENST00000524556 FNDC10F2Z333 226 aa9.99□□□□□ -0.81
CSTF3-204ENST00000524556 H3BTX0 84 aa9.99□□□□□ -0.81
CSTF3-204ENST00000524556 ZNF324O75467 553 aaPredicted RBP9.99□□□□□ -0.81
CSTF3-204ENST00000524556 CCNKO75909 580 aa9.99□□□□□ -0.81
CSTF3-204ENST00000524556 SLC38A11Q08AI6 406 aa9.99□□□□□ -0.81
CSTF3-204ENST00000524556 TEPPQ6URK8 271 aa9.99□□□□□ -0.81
CSTF3-204ENST00000524556 LYPD5Q6UWN5 251 aa9.99□□□□□ -0.81
CSTF3-204ENST00000524556 SAT2Q96F10 170 aaPredicted RBP9.99□□□□□ -0.81
CSTF3-204ENST00000524556 SMIM8Q96KF7 97 aa9.99□□□□□ -0.81
CSTF3-204ENST00000524556 NPIPB6E9PJ23 425 aa9.98□□□□□ -0.81
CSTF3-204ENST00000524556 IGLC2P0DOY2 106 aa9.98□□□□□ -0.81
CSTF3-204ENST00000524556 SLC25A21Q9BQT8 299 aaPredicted RBP9.98□□□□□ -0.81
CSTF3-204ENST00000524556 CCDC59Q9P031 241 aaKnown RBP9.98□□□□□ -0.81
CSTF3-204ENST00000524556 FABP12A6NFH5 140 aa9.97□□□□□ -0.81
CSTF3-204ENST00000524556 H3BQ15 152 aa9.97□□□□□ -0.81
CSTF3-204ENST00000524556 J3QL48 77 aa9.97□□□□□ -0.81
CSTF3-204ENST00000524556 GOSR2O14653 212 aa9.97□□□□□ -0.81
CSTF3-204ENST00000524556 SSSCA1O60232 199 aa9.97□□□□□ -0.81
CSTF3-204ENST00000524556 SPINK4O60575 86 aa9.97□□□□□ -0.81
CSTF3-204ENST00000524556 SLC25A5P05141 298 aaKnown RBP9.97□□□□□ -0.81
CSTF3-204ENST00000524556 METTL15P1P0C7V9 234 aa9.97□□□□□ -0.81
CSTF3-204ENST00000524556 MORN5Q5VZ52 161 aa9.97□□□□□ -0.81
CSTF3-204ENST00000524556 TMEM14EPQ6UXP3 125 aa9.97□□□□□ -0.81
CSTF3-204ENST00000524556 Q6ZSN1 163 aa9.97□□□□□ -0.81
CSTF3-204ENST00000524556 ZNF546Q86UE3 836 aa9.97□□□□□ -0.81
CSTF3-204ENST00000524556 DYNC2LI1Q8TCX1 351 aa9.97□□□□□ -0.81
CSTF3-204ENST00000524556 TMEM37Q8WXS4 190 aa9.97□□□□□ -0.81
CSTF3-204ENST00000524556 ST6GAL2Q96JF0 529 aa9.97□□□□□ -0.81
CSTF3-204ENST00000524556 LINC00467Q9BRT7 94 aa9.97□□□□□ -0.81
CSTF3-204ENST00000524556 MSRB1Q9NZV6 116 aa9.97□□□□□ -0.81
CSTF3-204ENST00000524556 MGAT4CQ9UBM8 478 aa9.97□□□□□ -0.81
CSTF3-204ENST00000524556 PRO0255Q9UI72 69 aa9.97□□□□□ -0.81
CSTF3-204ENST00000524556 KLF12Q9Y4X4 402 aa9.97□□□□□ -0.81
CSTF3-204ENST00000524556 C7orf71A4D174 169 aa9.96□□□□□ -0.82
CSTF3-204ENST00000524556 AGPAT2O15120 278 aa9.96□□□□□ -0.82
CSTF3-204ENST00000524556 COX7A2P2O60397 106 aa9.96□□□□□ -0.82
CSTF3-204ENST00000524556 TNFSF8P32971 234 aa9.96□□□□□ -0.82
CSTF3-204ENST00000524556 HAMPP81172 84 aa9.96□□□□□ -0.82
CSTF3-204ENST00000524556 OPCMLQ14982 345 aa9.96□□□□□ -0.82
CSTF3-204ENST00000524556 ANXA2RQ3ZCQ2 193 aa9.96□□□□□ -0.82
CSTF3-204ENST00000524556 EIF4E3Q8N5X7 224 aaKnown RBP9.96□□□□□ -0.82
CSTF3-204ENST00000524556 OR10P1Q8NGE3 313 aa9.96□□□□□ -0.82
CSTF3-204ENST00000524556 LY96Q9Y6Y9 160 aa9.96□□□□□ -0.82
CSTF3-204ENST00000524556 K7EP13 123 aa9.95□□□□□ -0.82
CSTF3-204ENST00000524556 IGHV3-53P01767 116 aa9.95□□□□□ -0.82
CSTF3-204ENST00000524556 CRYBA4P53673 196 aa9.95□□□□□ -0.82
CSTF3-204ENST00000524556 TCL1AP56279 114 aa9.95□□□□□ -0.82
CSTF3-204ENST00000524556 AP3S2P59780 193 aa9.95□□□□□ -0.82
CSTF3-204ENST00000524556 SLAQ13239 276 aa9.95□□□□□ -0.82
CSTF3-204ENST00000524556 MRPL23Q16540 153 aaKnown RBP9.95□□□□□ -0.82
CSTF3-204ENST00000524556 GUK1Q16774 197 aa9.95□□□□□ -0.82
CSTF3-204ENST00000524556 TOMM5Q8N4H5 51 aa9.95□□□□□ -0.82
CSTF3-204ENST00000524556 MCFD2Q8NI22 146 aa9.95□□□□□ -0.82
CSTF3-204ENST00000524556 TRIM63Q969Q1 353 aa9.95□□□□□ -0.82
CSTF3-204ENST00000524556 HMCN2Q8NDA2 5059 aa9.95□□□□□ -0.82
CSTF3-204ENST00000524556 KLLNB2CW77 178 aa9.94□□□□□ -0.82
CSTF3-204ENST00000524556 PRAF2O60831 178 aa9.94□□□□□ -0.82
CSTF3-204ENST00000524556 CD300CQ08708 224 aa9.94□□□□□ -0.82
CSTF3-204ENST00000524556 C10orf113Q5VZT2 155 aa9.94□□□□□ -0.82
CSTF3-204ENST00000524556 NEGR1Q7Z3B1 354 aa9.94□□□□□ -0.82
CSTF3-204ENST00000524556 TMEM70Q9BUB7 260 aa9.94□□□□□ -0.82
CSTF3-204ENST00000524556 HHLA3Q9XRX5 114 aa9.94□□□□□ -0.82
CSTF3-204ENST00000524556 UBR4Q5T4S7 5183 aa9.94□□□□□ -0.82
CSTF3-204ENST00000524556 TRAV5A0A0B4J249 113 aa9.93□□□□□ -0.82
CSTF3-204ENST00000524556 EVI2AP22794 236 aa9.93□□□□□ -0.82
CSTF3-204ENST00000524556 UBE2MP61081 183 aaKnown RBP9.93□□□□□ -0.82
CSTF3-204ENST00000524556 ARL16Q0P5N6 197 aa9.93□□□□□ -0.82
CSTF3-204ENST00000524556 ERCC8Q13216 396 aa9.93□□□□□ -0.82
CSTF3-204ENST00000524556 BTN1A1Q13410 526 aa9.93□□□□□ -0.82
CSTF3-204ENST00000524556 FHL2Q14192 279 aa9.93□□□□□ -0.82
CSTF3-204ENST00000524556 IBA57Q5T440 356 aaKnown RBP9.93□□□□□ -0.82
CSTF3-204ENST00000524556 MRPL53Q96EL3 112 aaKnown RBP9.93□□□□□ -0.82
CSTF3-204ENST00000524556 FAM19A4Q96LR4 140 aa9.93□□□□□ -0.82
CSTF3-204ENST00000524556 C8orf49Q96NF6 230 aa9.93□□□□□ -0.82
CSTF3-204ENST00000524556 MGST2Q99735 147 aa9.93□□□□□ -0.82
CSTF3-204ENST00000524556 GGACTQ9BVM4 153 aa9.93□□□□□ -0.82
CSTF3-204ENST00000524556 DNAJC4Q9NNZ3 241 aa9.93□□□□□ -0.82
CSTF3-204ENST00000524556 C9orf170A2RU37 121 aa9.92□□□□□ -0.82
CSTF3-204ENST00000524556 TSC22D2O75157 780 aa9.92□□□□□ -0.82
CSTF3-204ENST00000524556 ZNF253O75346 499 aa9.92□□□□□ -0.82
CSTF3-204ENST00000524556 MPDU1O75352 247 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms