RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 FAM24BQ8N5W8 94 aa7.05□□□□□ -1.28
SDCBP-212ENST00000523483 LINC00482Q8N8I6 264 aa7.05□□□□□ -1.28
SDCBP-212ENST00000523483 AGRNO00468 2067 aa7.05□□□□□ -1.28
SDCBP-212ENST00000523483 M0R036 132 aa7.04□□□□□ -1.28
SDCBP-212ENST00000523483 CD5P06127 495 aa7.04□□□□□ -1.28
SDCBP-212ENST00000523483 SRP19P09132 144 aaKnown RBP7.04□□□□□ -1.28
SDCBP-212ENST00000523483 DEFB114Q30KQ6 69 aa7.04□□□□□ -1.28
SDCBP-212ENST00000523483 C5orf17Q8NAS9 161 aa7.04□□□□□ -1.28
SDCBP-212ENST00000523483 Q8TAT8 98 aa7.04□□□□□ -1.28
SDCBP-212ENST00000523483 PARLQ9H300 379 aa7.04□□□□□ -1.28
SDCBP-212ENST00000523483 OTORQ9NRC9 128 aa7.04□□□□□ -1.28
SDCBP-212ENST00000523483 TMEM218A2RU14 115 aa7.04□□□□□ -1.28
SDCBP-212ENST00000523483 PRAC2D3DTV9 90 aa7.04□□□□□ -1.28
SDCBP-212ENST00000523483 PEX7O00628 323 aa7.04□□□□□ -1.28
SDCBP-212ENST00000523483 PDE6DO43924 150 aa7.04□□□□□ -1.28
SDCBP-212ENST00000523483 MGST1P10620 155 aaKnown RBP7.04□□□□□ -1.28
SDCBP-212ENST00000523483 IGLL1P15814 213 aa7.04□□□□□ -1.28
SDCBP-212ENST00000523483 SNRPD3P62318 126 aaKnown RBP7.04□□□□□ -1.28
SDCBP-212ENST00000523483 LCN12Q6JVE5 192 aa7.04□□□□□ -1.28
SDCBP-212ENST00000523483 PRR27Q6MZM9 219 aa7.04□□□□□ -1.28
SDCBP-212ENST00000523483 PRNTQ86SH4 94 aa7.04□□□□□ -1.28
SDCBP-212ENST00000523483 OR4B1Q8NGF8 309 aa7.04□□□□□ -1.28
SDCBP-212ENST00000523483 ZNF747Q9BV97 191 aa7.04□□□□□ -1.28
SDCBP-212ENST00000523483 EPDR1Q9UM22 224 aa7.04□□□□□ -1.28
SDCBP-212ENST00000523483 RPL35P42766 123 aaKnown RBP7.04□□□□□ -1.28
SDCBP-212ENST00000523483 CNN1P51911 297 aaKnown RBP7.04□□□□□ -1.28
SDCBP-212ENST00000523483 HIST1H1AQ02539 215 aaPredicted RBP7.04□□□□□ -1.28
SDCBP-212ENST00000523483 ZNF124Q15973 351 aa7.04□□□□□ -1.28
SDCBP-212ENST00000523483 SLC50A1Q9BRV3 221 aa7.04□□□□□ -1.28
SDCBP-212ENST00000523483 ISLRO14498 428 aa7.03□□□□□ -1.28
SDCBP-212ENST00000523483 ID1P41134 155 aa7.03□□□□□ -1.28
SDCBP-212ENST00000523483 ERCC8Q13216 396 aa7.03□□□□□ -1.28
SDCBP-212ENST00000523483 PDE6HQ13956 83 aa7.03□□□□□ -1.28
SDCBP-212ENST00000523483 TCRAP04437 139 aa7.03□□□□□ -1.28
SDCBP-212ENST00000523483 TAGLN2P37802 199 aaKnown RBP7.03□□□□□ -1.28
SDCBP-212ENST00000523483 DEFB131AP59861 70 aa7.03□□□□□ -1.28
SDCBP-212ENST00000523483 ADIRFQ15847 76 aa7.03□□□□□ -1.28
SDCBP-212ENST00000523483 UQCC3Q6UW78 93 aa7.03□□□□□ -1.28
SDCBP-212ENST00000523483 APRG1Q8IVJ8 170 aa7.03□□□□□ -1.28
SDCBP-212ENST00000523483 C20orf173Q96LM9 149 aa7.03□□□□□ -1.28
SDCBP-212ENST00000523483 NKX6-2Q9C056 277 aaPredicted RBP7.03□□□□□ -1.28
SDCBP-212ENST00000523483 K7EQM0 130 aa7.03□□□□□ -1.28
SDCBP-212ENST00000523483 MEOX2P50222 304 aa7.03□□□□□ -1.28
SDCBP-212ENST00000523483 NIPSNAP3BQ9BS92 247 aa7.03□□□□□ -1.28
SDCBP-212ENST00000523483 TRAV8-2A0A0B4J237 113 aa7.02□□□□□ -1.29
SDCBP-212ENST00000523483 OXLD1Q5BKU9 147 aa7.02□□□□□ -1.29
SDCBP-212ENST00000523483 FAM90A2PQ658T7 463 aa7.02□□□□□ -1.29
SDCBP-212ENST00000523483 ATG101Q9BSB4 218 aa7.02□□□□□ -1.29
SDCBP-212ENST00000523483 PPP1R14DQ9NXH3 145 aa7.02□□□□□ -1.29
SDCBP-212ENST00000523483 ADCYAP1P18509 176 aa7.02□□□□□ -1.29
SDCBP-212ENST00000523483 GNG4P50150 75 aa7.02□□□□□ -1.29
SDCBP-212ENST00000523483 PSG3Q16557 428 aa7.02□□□□□ -1.29
SDCBP-212ENST00000523483 DCANP1Q8TF63 244 aa7.02□□□□□ -1.29
SDCBP-212ENST00000523483 VGLL1Q99990 258 aa7.02□□□□□ -1.29
SDCBP-212ENST00000523483 OR4C46A6NHA9 309 aa7.02□□□□□ -1.29
SDCBP-212ENST00000523483 CENPWQ5EE01 88 aa7.02□□□□□ -1.29
SDCBP-212ENST00000523483 ACTL10Q5JWF8 245 aa7.02□□□□□ -1.29
SDCBP-212ENST00000523483 WFDC10AQ9H1F0 79 aa7.02□□□□□ -1.29
SDCBP-212ENST00000523483 CLEC5AQ9NY25 188 aa7.02□□□□□ -1.29
SDCBP-212ENST00000523483 HIST1H2BAQ96A08 127 aa7.01□□□□□ -1.29
SDCBP-212ENST00000523483 NBEAL1Q6ZS30 2694 aa7.01□□□□□ -1.29
SDCBP-212ENST00000523483 A0A087X0K7 114 aa7.01□□□□□ -1.29
SDCBP-212ENST00000523483 KNCNA6PVL3 124 aa7.01□□□□□ -1.29
SDCBP-212ENST00000523483 DIRC3C9JPN6 131 aa7.01□□□□□ -1.29
SDCBP-212ENST00000523483 TMEM250H0YL14 139 aa7.01□□□□□ -1.29
SDCBP-212ENST00000523483 CD7P09564 240 aa7.01□□□□□ -1.29
SDCBP-212ENST00000523483 BAGE2Q86Y30 109 aa7.01□□□□□ -1.29
SDCBP-212ENST00000523483 CCDC28AQ8IWP9 274 aa7.01□□□□□ -1.29
SDCBP-212ENST00000523483 TMEM78Q5T7P6 136 aa7□□□□□ -1.29
SDCBP-212ENST00000523483 GDF5OSQ5U4N7 250 aa7□□□□□ -1.29
SDCBP-212ENST00000523483 LYPD1Q8N2G4 141 aa7□□□□□ -1.29
SDCBP-212ENST00000523483 OR10J6PQ8NGY7 276 aa7□□□□□ -1.29
SDCBP-212ENST00000523483 SUN5Q8TC36 379 aa7□□□□□ -1.29
SDCBP-212ENST00000523483 TXNDC17Q9BRA2 123 aa7□□□□□ -1.29
SDCBP-212ENST00000523483 K7EQG2 157 aa7□□□□□ -1.29
SDCBP-212ENST00000523483 EBLN2Q6P2I7 272 aa7□□□□□ -1.29
SDCBP-212ENST00000523483 EIF4E3Q8N5X7 224 aaKnown RBP7□□□□□ -1.29
SDCBP-212ENST00000523483 TRBV20OR9-2A0A075B6H5 130 aa7□□□□□ -1.29
SDCBP-212ENST00000523483 KRBOX1C9JBD0 128 aa7□□□□□ -1.29
SDCBP-212ENST00000523483 FXYD7P58549 80 aa7□□□□□ -1.29
SDCBP-212ENST00000523483 FLI1Q01543 452 aaPredicted RBP7□□□□□ -1.29
SDCBP-212ENST00000523483 OR5I1Q13606 314 aa7□□□□□ -1.29
SDCBP-212ENST00000523483 C9orf66Q5T8R8 295 aa7□□□□□ -1.29
SDCBP-212ENST00000523483 SPAG8Q99932 426 aaPredicted RBP7□□□□□ -1.29
SDCBP-212ENST00000523483 IGLV1-51P01701 117 aa6.99□□□□□ -1.29
SDCBP-212ENST00000523483 TMEM241Q24JQ0 296 aa6.99□□□□□ -1.29
SDCBP-212ENST00000523483 C2CD4CQ8TF44 421 aa6.99□□□□□ -1.29
SDCBP-212ENST00000523483 SMDT1Q9H4I9 107 aa6.99□□□□□ -1.29
SDCBP-212ENST00000523483 NBEAL2Q6ZNJ1 2754 aa6.99□□□□□ -1.29
SDCBP-212ENST00000523483 PMS2P11Q13670 270 aa6.99□□□□□ -1.29
SDCBP-212ENST00000523483 PSG8Q9UQ74 426 aa6.99□□□□□ -1.29
SDCBP-212ENST00000523483 ARL2-SNX15V9GYD0 113 aa6.99□□□□□ -1.29
SDCBP-212ENST00000523483 OR11H12B2RN74 326 aa6.99□□□□□ -1.29
SDCBP-212ENST00000523483 SOCS3O14543 225 aa6.99□□□□□ -1.29
SDCBP-212ENST00000523483 SEC11CQ9BY50 192 aa6.99□□□□□ -1.29
SDCBP-212ENST00000523483 GPR61Q9BZJ8 451 aa6.99□□□□□ -1.29
SDCBP-212ENST00000523483 ZNF253O75346 499 aa6.98□□□□□ -1.29
SDCBP-212ENST00000523483 SCO1O75880 301 aa6.98□□□□□ -1.29
SDCBP-212ENST00000523483 SSTP61278 116 aa6.98□□□□□ -1.29
SDCBP-212ENST00000523483 OR8A1Q8NGG7 326 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms