RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 C2orf50Q96LR7 162 aa5.99□□□□□ -1.45
HDAC3-216ENST00000523088 LINC01600Q96MT4 127 aa5.99□□□□□ -1.45
HDAC3-216ENST00000523088 ZNF331Q9NQX6 463 aaPredicted RBP5.99□□□□□ -1.45
HDAC3-216ENST00000523088 MTORP42345 2549 aa5.98□□□□□ -1.45
HDAC3-216ENST00000523088 A0A1W2PS18 150 aa5.98□□□□□ -1.45
HDAC3-216ENST00000523088 H0YIZ8 118 aa5.98□□□□□ -1.45
HDAC3-216ENST00000523088 MRPS12O15235 138 aaKnown RBP5.98□□□□□ -1.45
HDAC3-216ENST00000523088 NUDT14O95848 222 aa5.98□□□□□ -1.45
HDAC3-216ENST00000523088 RBP4P02753 201 aa5.98□□□□□ -1.45
HDAC3-216ENST00000523088 MDKP21741 143 aaPredicted RBP5.98□□□□□ -1.45
HDAC3-216ENST00000523088 LRRC37A5PQ49AS3 106 aa5.98□□□□□ -1.45
HDAC3-216ENST00000523088 C19orf54Q5BKX5 351 aa5.98□□□□□ -1.45
HDAC3-216ENST00000523088 Q6ZS49 121 aa5.98□□□□□ -1.45
HDAC3-216ENST00000523088 C2orf91Q6ZV80 131 aa5.98□□□□□ -1.45
HDAC3-216ENST00000523088 GGNQ86UU5 652 aa5.98□□□□□ -1.45
HDAC3-216ENST00000523088 PRR15Q8IV56 129 aa5.98□□□□□ -1.45
HDAC3-216ENST00000523088 LINC01560Q8TB33 94 aa5.98□□□□□ -1.45
HDAC3-216ENST00000523088 RPS4Y2Q8TD47 263 aa5.98□□□□□ -1.45
HDAC3-216ENST00000523088 SSMEM1Q8WWF3 244 aa5.98□□□□□ -1.45
HDAC3-216ENST00000523088 DNAJA3Q96EY1 480 aa5.98□□□□□ -1.45
HDAC3-216ENST00000523088 TNFRSF12AQ9NP84 129 aa5.98□□□□□ -1.45
HDAC3-216ENST00000523088 HIGD1BQ9P298 99 aa5.98□□□□□ -1.45
HDAC3-216ENST00000523088 ZFHX3Q15911 3703 aa5.98□□□□□ -1.45
HDAC3-216ENST00000523088 RAI1Q7Z5J4 1906 aaPredicted RBP5.97□□□□□ -1.45
HDAC3-216ENST00000523088 ZNF469Q96JG9 3925 aaPredicted RBP5.97□□□□□ -1.45
HDAC3-216ENST00000523088 TRBV5-3A0A0A0MS03 114 aa5.97□□□□□ -1.45
HDAC3-216ENST00000523088 TRAV4A0A0B4J268 109 aa5.97□□□□□ -1.45
HDAC3-216ENST00000523088 FAM24AA6NFZ4 105 aa5.97□□□□□ -1.45
HDAC3-216ENST00000523088 A8MWL6 223 aa5.97□□□□□ -1.45
HDAC3-216ENST00000523088 LYZL6O75951 148 aa5.97□□□□□ -1.45
HDAC3-216ENST00000523088 CD3DP04234 171 aa5.97□□□□□ -1.45
HDAC3-216ENST00000523088 CDK5R1Q15078 307 aa5.97□□□□□ -1.45
HDAC3-216ENST00000523088 BEAN1Q3B7T3 259 aa5.97□□□□□ -1.45
HDAC3-216ENST00000523088 CFAP126Q5VTH2 177 aa5.97□□□□□ -1.45
HDAC3-216ENST00000523088 HIST2H2BDQ6DRA6 164 aa5.97□□□□□ -1.45
HDAC3-216ENST00000523088 MSRB3Q8IXL7 192 aa5.97□□□□□ -1.45
HDAC3-216ENST00000523088 LRTM2Q8N967 370 aa5.97□□□□□ -1.45
HDAC3-216ENST00000523088 GNB1LQ9BYB4 327 aa5.97□□□□□ -1.45
HDAC3-216ENST00000523088 Q9H8V8 135 aa5.97□□□□□ -1.45
HDAC3-216ENST00000523088 SERP1Q9Y6X1 66 aa5.97□□□□□ -1.45
HDAC3-216ENST00000523088 HRNRQ86YZ3 2850 aaPredicted RBP5.96□□□□□ -1.45
HDAC3-216ENST00000523088 FLNAP21333 2647 aaKnown RBP5.96□□□□□ -1.45
HDAC3-216ENST00000523088 FREM1Q5H8C1 2179 aa5.96□□□□□ -1.46
HDAC3-216ENST00000523088 A0A0J9YW62 118 aa5.96□□□□□ -1.46
HDAC3-216ENST00000523088 PLAUP00749 431 aa5.96□□□□□ -1.46
HDAC3-216ENST00000523088 IGKV1D-16P01601 117 aa5.96□□□□□ -1.46
HDAC3-216ENST00000523088 FCGR2CP31995 323 aa5.96□□□□□ -1.46
HDAC3-216ENST00000523088 QRFPP83859 136 aa5.96□□□□□ -1.46
HDAC3-216ENST00000523088 ZNF117Q03924 483 aa5.96□□□□□ -1.46
HDAC3-216ENST00000523088 RTL8BQ17RB0 113 aa5.96□□□□□ -1.46
HDAC3-216ENST00000523088 SYT14P1Q58G82 188 aa5.96□□□□□ -1.46
HDAC3-216ENST00000523088 LINC01545Q5VT33 79 aa5.96□□□□□ -1.46
HDAC3-216ENST00000523088 PQLC2Q6ZP29 291 aa5.96□□□□□ -1.46
HDAC3-216ENST00000523088 PRR26Q8N8Z3 221 aa5.96□□□□□ -1.46
HDAC3-216ENST00000523088 BORCS8Q96FH0 119 aa5.96□□□□□ -1.46
HDAC3-216ENST00000523088 CCL19Q99731 98 aa5.96□□□□□ -1.46
HDAC3-216ENST00000523088 SHANK2-AS3Q9BTD1 123 aa5.96□□□□□ -1.46
HDAC3-216ENST00000523088 WDR83OSQ9Y284 106 aa5.96□□□□□ -1.46
HDAC3-216ENST00000523088 TRBV7-6A0A0J9YX20 115 aa5.95□□□□□ -1.46
HDAC3-216ENST00000523088 GRIFINA4D1Z8 144 aa5.95□□□□□ -1.46
HDAC3-216ENST00000523088 KNCNA6PVL3 124 aa5.95□□□□□ -1.46
HDAC3-216ENST00000523088 DEFB108AA8MXU0 73 aa5.95□□□□□ -1.46
HDAC3-216ENST00000523088 VCYO14598 125 aa5.95□□□□□ -1.46
HDAC3-216ENST00000523088 APCSP02743 223 aa5.95□□□□□ -1.46
HDAC3-216ENST00000523088 ROS1P08922 2347 aa5.95□□□□□ -1.46
HDAC3-216ENST00000523088 CA6P23280 308 aa5.95□□□□□ -1.46
HDAC3-216ENST00000523088 DUTP33316 252 aaKnown RBP5.95□□□□□ -1.46
HDAC3-216ENST00000523088 INSL3P51460 131 aa5.95□□□□□ -1.46
HDAC3-216ENST00000523088 MTPNP58546 118 aa5.95□□□□□ -1.46
HDAC3-216ENST00000523088 RPL23P62829 140 aaKnown RBP5.95□□□□□ -1.46
HDAC3-216ENST00000523088 MRPS36P82909 103 aaKnown RBP5.95□□□□□ -1.46
HDAC3-216ENST00000523088 FAM219BQ5XKK7 198 aa5.95□□□□□ -1.46
HDAC3-216ENST00000523088 GTSCR1Q86UQ5 136 aa5.95□□□□□ -1.46
HDAC3-216ENST00000523088 DRAM1Q8N682 238 aa5.95□□□□□ -1.46
HDAC3-216ENST00000523088 FAM213BQ8TBF2 198 aa5.95□□□□□ -1.46
HDAC3-216ENST00000523088 C18orf12Q96KH6 178 aa5.95□□□□□ -1.46
HDAC3-216ENST00000523088 C2orf48Q96LS8 159 aa5.95□□□□□ -1.46
HDAC3-216ENST00000523088 TNFRSF19Q9NS68 423 aa5.95□□□□□ -1.46
HDAC3-216ENST00000523088 RPUSD1Q9UJJ7 312 aaKnown RBP5.95□□□□□ -1.46
HDAC3-216ENST00000523088 NAV3Q8IVL0 2385 aa5.95□□□□□ -1.46
HDAC3-216ENST00000523088 SETD2Q9BYW2 2564 aaPredicted RBP5.95□□□□□ -1.46
HDAC3-216ENST00000523088 ACANP16112 2415 aa5.95□□□□□ -1.46
HDAC3-216ENST00000523088 VPS13CQ709C8 3753 aa5.94□□□□□ -1.46
HDAC3-216ENST00000523088 SDCBPO00560 298 aaPredicted RBP5.94□□□□□ -1.46
HDAC3-216ENST00000523088 HLA-DOBP13765 273 aa5.94□□□□□ -1.46
HDAC3-216ENST00000523088 CFPP27918 469 aa5.94□□□□□ -1.46
HDAC3-216ENST00000523088 S100A3P33764 101 aa5.94□□□□□ -1.46
HDAC3-216ENST00000523088 HBG1P69891 147 aa5.94□□□□□ -1.46
HDAC3-216ENST00000523088 HBG2P69892 147 aa5.94□□□□□ -1.46
HDAC3-216ENST00000523088 DAZ2Q13117 558 aaKnown RBP5.94□□□□□ -1.46
HDAC3-216ENST00000523088 TMEM187Q14656 261 aa5.94□□□□□ -1.46
HDAC3-216ENST00000523088 LINC01559Q495D7 138 aa5.94□□□□□ -1.46
HDAC3-216ENST00000523088 RNASE12Q5GAN4 147 aaKnown RBP5.94□□□□□ -1.46
HDAC3-216ENST00000523088 DAZ4Q86SG3 579 aaKnown RBP5.94□□□□□ -1.46
HDAC3-216ENST00000523088 LINC00311Q8N616 119 aa5.94□□□□□ -1.46
HDAC3-216ENST00000523088 C11orf45Q8TAV5 145 aa5.94□□□□□ -1.46
HDAC3-216ENST00000523088 PHLDA1Q8WV24 401 aaPredicted RBP5.94□□□□□ -1.46
HDAC3-216ENST00000523088 SRXN1Q9BYN0 137 aa5.94□□□□□ -1.46
HDAC3-216ENST00000523088 MRPL18Q9H0U6 180 aaKnown RBP5.94□□□□□ -1.46
HDAC3-216ENST00000523088 DAZ1Q9NQZ3 744 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms