RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 HIGD1AQ9Y241 93 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 PUS1Q9Y606 427 aaKnown RBP eCLIP2.1□□□□□ -2.07
MCF2-208ENST00000519895 SMAD5-AS1Q9Y6J3 95 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 CXorf65A6NEN9 183 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 ATP6V1G1O75348 118 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 RBMXL2O75526 392 aaKnown RBP2.1□□□□□ -2.07
MCF2-208ENST00000519895 NXPH3O95157 252 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 IGHV3-7P01780 117 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 HIST1H1EP10412 219 aaKnown RBP2.1□□□□□ -2.07
MCF2-208ENST00000519895 HLA-DRB4P13762 266 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 CRISP2P16562 243 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 RAB2AP61019 212 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 NSUN5P1Q3KNT7 163 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 SP6Q3SY56 376 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 C10orf55Q5SWW7 151 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 CLEC19AQ6UXS0 136 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 TRPT1Q86TN4 253 aaKnown RBP2.1□□□□□ -2.07
MCF2-208ENST00000519895 OR10W1Q8NGF6 305 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 THAP6Q8TBB0 222 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 RXFP4Q8TDU9 374 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 DYNLRB2Q8TF09 96 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 SAV1Q9H4B6 383 aaPredicted RBP2.1□□□□□ -2.07
MCF2-208ENST00000519895 NRN1Q9NPD7 142 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 ALG5Q9Y673 324 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 HLA-DRB4X5D2U9 266 aa2.1□□□□□ -2.07
MCF2-208ENST00000519895 TRAV6A0A075B6T7 132 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 BORCS7-ASMTA0A0B4J1R7 106 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 NPIPB6E9PJ23 425 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 H3BNG1 76 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 PRB2P02812 416 aaPredicted RBP2.09□□□□□ -2.07
MCF2-208ENST00000519895 IGLC2P0DOY2 106 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 RND2P52198 227 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 LINC00205P59089 165 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 KRTAP10-11P60412 298 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 SNRPD3P62318 126 aaKnown RBP2.09□□□□□ -2.07
MCF2-208ENST00000519895 EWSR1Q01844 656 aaKnown RBP eCLIP2.09□□□□□ -2.07
MCF2-208ENST00000519895 NHLH2Q02577 135 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 ACOT6Q3I5F7 207 aaPredicted RBP2.09□□□□□ -2.07
MCF2-208ENST00000519895 KHDC3LQ587J8 217 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 EIF5AL1Q6IS14 154 aaKnown RBP2.09□□□□□ -2.07
MCF2-208ENST00000519895 TMED4Q7Z7H5 227 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 VKORC1L1Q8N0U8 176 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 LINC00612Q8N6U2 182 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 OR4C5Q8NGB2 326 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 MBD3L1Q8WWY6 194 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 ST6GAL2Q96JF0 529 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 LINC00477Q96M19 166 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 CHRDL1Q9BU40 450 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 RHPN1-AS1Q9BWJ2 59 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 SMDT1Q9H4I9 107 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 SLC39A9Q9NUM3 307 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 LOC102724200A0A096LPH7 203 aaPredicted RBP2.09□□□□□ -2.07
MCF2-208ENST00000519895 IFNA5P01569 189 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 C1QBP02746 253 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 IFNA4P05014 189 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 PSG1P11464 419 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 MIFP14174 115 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 GPR183P32249 361 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 LEPP41159 167 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 SLURP1P55000 103 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 UBE2V1Q13404 147 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 FAM159AQ6UWV7 190 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 ZNF493Q6ZR52 646 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 Q6ZRG5 221 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 C9orf47Q6ZRZ4 202 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 ZNF329Q86UD4 541 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 BPIFA4PQ86YQ2 179 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 SLC7A5P1Q8MH63 180 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 FRZBQ92765 325 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 TAF15Q92804 592 aaKnown RBP eCLIP2.09□□□□□ -2.07
MCF2-208ENST00000519895 OVOL2Q9BRP0 275 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 TMEM167BQ9NRX6 74 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 ZNF355PQ9NSJ1 428 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 FLVCR2Q9UPI3 526 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 RFNGQ9Y644 331 aa2.09□□□□□ -2.07
MCF2-208ENST00000519895 WNK2Q9Y3S1 2297 aa2.09□□□□□ -2.08
MCF2-208ENST00000519895 A0A1W2PRE2 83 aa2.09□□□□□ -2.08
MCF2-208ENST00000519895 IGSF23A1L1A6 192 aa2.09□□□□□ -2.08
MCF2-208ENST00000519895 ZNF98A6NK75 572 aa2.09□□□□□ -2.08
MCF2-208ENST00000519895 HSBP1L1C9JCN9 74 aa2.09□□□□□ -2.08
MCF2-208ENST00000519895 TEX46H3BTG2 121 aa2.09□□□□□ -2.08
MCF2-208ENST00000519895 AGPAT2O15120 278 aa2.09□□□□□ -2.08
MCF2-208ENST00000519895 IGLL1P15814 213 aa2.09□□□□□ -2.08
MCF2-208ENST00000519895 PI3P19957 117 aa2.09□□□□□ -2.08
MCF2-208ENST00000519895 RPL12P30050 165 aaKnown RBP2.09□□□□□ -2.08
MCF2-208ENST00000519895 SYNJ2BPP57105 145 aa2.09□□□□□ -2.08
MCF2-208ENST00000519895 NUTF2P61970 127 aaKnown RBP2.09□□□□□ -2.08
MCF2-208ENST00000519895 RHOBP62745 196 aa2.09□□□□□ -2.08
MCF2-208ENST00000519895 PRB3Q04118 309 aaPredicted RBP2.09□□□□□ -2.08
MCF2-208ENST00000519895 ANXA2RQ3ZCQ2 193 aa2.09□□□□□ -2.08
MCF2-208ENST00000519895 TIGITQ495A1 244 aa2.09□□□□□ -2.08
MCF2-208ENST00000519895 RNASE12Q5GAN4 147 aaKnown RBP2.09□□□□□ -2.08
MCF2-208ENST00000519895 FAAP20Q6NZ36 180 aa2.09□□□□□ -2.08
MCF2-208ENST00000519895 C10orf99Q6UWK7 81 aa2.09□□□□□ -2.08
MCF2-208ENST00000519895 OR10G7Q8NGN6 311 aa2.09□□□□□ -2.08
MCF2-208ENST00000519895 PPP1R1CQ8WVI7 109 aa2.09□□□□□ -2.08
MCF2-208ENST00000519895 SGK494Q96LW2 274 aa2.09□□□□□ -2.08
MCF2-208ENST00000519895 HYLS1Q96M11 299 aa2.09□□□□□ -2.08
MCF2-208ENST00000519895 DUX5Q96PT3 197 aa2.09□□□□□ -2.08
MCF2-208ENST00000519895 MGST2Q99735 147 aa2.09□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms