RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 CIB3Q96Q77 187 aaPredicted RBP6.83□□□□□ -1.32
HDAC3-215ENST00000519474 RAB40CQ96S21 281 aa6.83□□□□□ -1.32
HDAC3-215ENST00000519474 TRGV9Q99603 122 aa6.83□□□□□ -1.32
HDAC3-215ENST00000519474 RARRES2Q99969 163 aa6.83□□□□□ -1.32
HDAC3-215ENST00000519474 ZFP92A6NM28 416 aa6.82□□□□□ -1.32
HDAC3-215ENST00000519474 PMS2P5A8MQ11 134 aa6.82□□□□□ -1.32
HDAC3-215ENST00000519474 SNRPGP15A8MWD9 76 aa6.82□□□□□ -1.32
HDAC3-215ENST00000519474 ZNF688P0C7X2 276 aa6.82□□□□□ -1.32
HDAC3-215ENST00000519474 PET100P0DJ07 73 aa6.82□□□□□ -1.32
HDAC3-215ENST00000519474 OR2F1Q13607 317 aa6.82□□□□□ -1.32
HDAC3-215ENST00000519474 SPANXN5Q5MJ07 72 aa6.82□□□□□ -1.32
HDAC3-215ENST00000519474 EIF5AL1Q6IS14 154 aaKnown RBP6.82□□□□□ -1.32
HDAC3-215ENST00000519474 TRPT1Q86TN4 253 aaKnown RBP6.82□□□□□ -1.32
HDAC3-215ENST00000519474 STHQ8IWL8 128 aa6.82□□□□□ -1.32
HDAC3-215ENST00000519474 THAP8Q8NA92 274 aa6.82□□□□□ -1.32
HDAC3-215ENST00000519474 C2CD4CQ8TF44 421 aa6.82□□□□□ -1.32
HDAC3-215ENST00000519474 GATAD1Q8WUU5 269 aa6.82□□□□□ -1.32
HDAC3-215ENST00000519474 SLC35E1Q96K37 410 aa6.82□□□□□ -1.32
HDAC3-215ENST00000519474 ACTR3CQ9C0K3 210 aaPredicted RBP6.82□□□□□ -1.32
HDAC3-215ENST00000519474 SMCO4Q9NRQ5 59 aa6.82□□□□□ -1.32
HDAC3-215ENST00000519474 COLCA2A8K830 154 aa6.81□□□□□ -1.32
HDAC3-215ENST00000519474 SIVA1O15304 175 aa6.81□□□□□ -1.32
HDAC3-215ENST00000519474 NMBP08949 121 aa6.81□□□□□ -1.32
HDAC3-215ENST00000519474 GSG1LQ6UXU4 331 aa6.81□□□□□ -1.32
HDAC3-215ENST00000519474 PBDC1Q9BVG4 233 aa6.81□□□□□ -1.32
HDAC3-215ENST00000519474 PSENENQ9NZ42 101 aa6.81□□□□□ -1.32
HDAC3-215ENST00000519474 SMCO3A2RU48 225 aa6.8□□□□□ -1.32
HDAC3-215ENST00000519474 LYRM1O43325 122 aa6.8□□□□□ -1.32
HDAC3-215ENST00000519474 CA1P00915 261 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-215ENST00000519474 GATA2P23769 480 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-215ENST00000519474 NKX2-1P43699 371 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-215ENST00000519474 RANP62826 216 aaKnown RBP6.8□□□□□ -1.32
HDAC3-215ENST00000519474 RYR3Q15413 4870 aa6.8□□□□□ -1.32
HDAC3-215ENST00000519474 PSMG4Q5JS54 123 aa6.8□□□□□ -1.32
HDAC3-215ENST00000519474 ACTL10Q5JWF8 245 aa6.8□□□□□ -1.32
HDAC3-215ENST00000519474 C1orf194Q5T5A4 169 aa6.8□□□□□ -1.32
HDAC3-215ENST00000519474 CEMP1Q6PRD7 247 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-215ENST00000519474 SIGLEC15Q6ZMC9 328 aa6.8□□□□□ -1.32
HDAC3-215ENST00000519474 NRARPQ7Z6K4 114 aa6.8□□□□□ -1.32
HDAC3-215ENST00000519474 CSNK1G2-AS1Q8NCQ2 148 aa6.8□□□□□ -1.32
HDAC3-215ENST00000519474 THAP6Q8TBB0 222 aa6.8□□□□□ -1.32
HDAC3-215ENST00000519474 C17orf77Q96MU5 243 aa6.8□□□□□ -1.32
HDAC3-215ENST00000519474 SLC25A32Q9H2D1 315 aa6.8□□□□□ -1.32
HDAC3-215ENST00000519474 NRN1Q9NPD7 142 aa6.8□□□□□ -1.32
HDAC3-215ENST00000519474 H3BMM0 161 aa6.79□□□□□ -1.32
HDAC3-215ENST00000519474 H3BP45 60 aa6.79□□□□□ -1.32
HDAC3-215ENST00000519474 SLC17A3O00476 420 aa6.79□□□□□ -1.32
HDAC3-215ENST00000519474 DEFB4AO15263 64 aa6.79□□□□□ -1.32
HDAC3-215ENST00000519474 GCGP01275 180 aa6.79□□□□□ -1.32
HDAC3-215ENST00000519474 DEFB1P60022 68 aa6.79□□□□□ -1.32
HDAC3-215ENST00000519474 LYZP61626 148 aa6.79□□□□□ -1.32
HDAC3-215ENST00000519474 JOSD1Q15040 202 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-215ENST00000519474 CDPF1Q6NVV7 123 aa6.79□□□□□ -1.32
HDAC3-215ENST00000519474 MORN3Q6PF18 240 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-215ENST00000519474 ISOC2Q96AB3 205 aa6.79□□□□□ -1.32
HDAC3-215ENST00000519474 C20orf85Q9H1P6 137 aa6.79□□□□□ -1.32
HDAC3-215ENST00000519474 IGSF23A1L1A6 192 aa6.78□□□□□ -1.32
HDAC3-215ENST00000519474 ZNF705EA8MWA4 302 aaPredicted RBP6.78□□□□□ -1.32
HDAC3-215ENST00000519474 SOCS3O14543 225 aa6.78□□□□□ -1.32
HDAC3-215ENST00000519474 CCL25O15444 150 aa6.78□□□□□ -1.32
HDAC3-215ENST00000519474 CFDP00746 253 aaPredicted RBP6.78□□□□□ -1.32
HDAC3-215ENST00000519474 MBPP02686 304 aaPredicted RBP6.78□□□□□ -1.32
HDAC3-215ENST00000519474 RBMY1A1P0DJD3 496 aaKnown RBP6.78□□□□□ -1.32
HDAC3-215ENST00000519474 RBMY1CP0DJD4 496 aa6.78□□□□□ -1.32
HDAC3-215ENST00000519474 CKS1BP61024 79 aa6.78□□□□□ -1.32
HDAC3-215ENST00000519474 SNRPD3P62318 126 aaKnown RBP6.78□□□□□ -1.32
HDAC3-215ENST00000519474 ARL16Q0P5N6 197 aa6.78□□□□□ -1.32
HDAC3-215ENST00000519474 RBMY1FQ15415 496 aaKnown RBP6.78□□□□□ -1.32
HDAC3-215ENST00000519474 IAH1Q2TAA2 248 aaPredicted RBP6.78□□□□□ -1.32
HDAC3-215ENST00000519474 GDF5OSQ5U4N7 250 aa6.78□□□□□ -1.32
HDAC3-215ENST00000519474 TMEM14EPQ6UXP3 125 aa6.78□□□□□ -1.32
HDAC3-215ENST00000519474 X6R8D5 127 aa6.78□□□□□ -1.32
HDAC3-215ENST00000519474 C7orf66A4D0T2 115 aa6.77□□□□□ -1.33
HDAC3-215ENST00000519474 M0QXV9 152 aa6.77□□□□□ -1.33
HDAC3-215ENST00000519474 PDE6DO43924 150 aa6.77□□□□□ -1.33
HDAC3-215ENST00000519474 MPC2O95563 127 aa6.77□□□□□ -1.33
HDAC3-215ENST00000519474 SNRPCP09234 159 aaKnown RBP6.77□□□□□ -1.33
HDAC3-215ENST00000519474 ORM2P19652 201 aa6.77□□□□□ -1.33
HDAC3-215ENST00000519474 TAS2R30P59541 319 aa6.77□□□□□ -1.33
HDAC3-215ENST00000519474 NANOS2P60321 138 aaKnown RBP6.77□□□□□ -1.33
HDAC3-215ENST00000519474 RAP2BP61225 183 aa6.77□□□□□ -1.33
HDAC3-215ENST00000519474 IL15RAQ13261 267 aa6.77□□□□□ -1.33
HDAC3-215ENST00000519474 CYP2G1PQ6ZSU1 146 aa6.77□□□□□ -1.33
HDAC3-215ENST00000519474 OR8I2Q8N0Y5 310 aa6.77□□□□□ -1.33
HDAC3-215ENST00000519474 TMEM217Q8N7C4 229 aa6.77□□□□□ -1.33
HDAC3-215ENST00000519474 Q8NAQ8 132 aa6.77□□□□□ -1.33
HDAC3-215ENST00000519474 C11orf45Q8TAV5 145 aa6.77□□□□□ -1.33
HDAC3-215ENST00000519474 PHLDA1Q8WV24 401 aaPredicted RBP6.77□□□□□ -1.33
HDAC3-215ENST00000519474 CST9LQ9H4G1 147 aa6.77□□□□□ -1.33
HDAC3-215ENST00000519474 C11orf1Q9H5F2 150 aa6.77□□□□□ -1.33
HDAC3-215ENST00000519474 NPVFQ9HCQ7 196 aa6.77□□□□□ -1.33
HDAC3-215ENST00000519474 FBXL17Q9UF56 701 aa6.77□□□□□ -1.33
HDAC3-215ENST00000519474 SLC45A2Q9UMX9 530 aa6.77□□□□□ -1.33
HDAC3-215ENST00000519474 NUPR2A6NF83 97 aa6.76□□□□□ -1.33
HDAC3-215ENST00000519474 SSSCA1O60232 199 aa6.76□□□□□ -1.33
HDAC3-215ENST00000519474 JTBO76095 146 aa6.76□□□□□ -1.33
HDAC3-215ENST00000519474 S100A7P31151 101 aa6.76□□□□□ -1.33
HDAC3-215ENST00000519474 SEC61GP60059 68 aa6.76□□□□□ -1.33
HDAC3-215ENST00000519474 PLP1P60201 277 aa6.76□□□□□ -1.33
HDAC3-215ENST00000519474 RPL32P62910 135 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms