RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 HIST1H1AQ02539 215 aaPredicted RBP16.52■□□□□ 0.24
SKP1-206ENST00000519321 AKR1C8PQ5T2L2 129 aa16.52■□□□□ 0.24
SKP1-206ENST00000519321 LYPD1Q8N2G4 141 aa16.52■□□□□ 0.24
SKP1-206ENST00000519321 ZNF503Q96F45 646 aa16.52■□□□□ 0.24
SKP1-206ENST00000519321 OR10J6PQ8NGY7 276 aa16.51■□□□□ 0.23
SKP1-206ENST00000519321 RAB24Q969Q5 203 aa16.51■□□□□ 0.23
SKP1-206ENST00000519321 HUWE1Q7Z6Z7 4374 aaKnown RBP16.5■□□□□ 0.23
SKP1-206ENST00000519321 ZNF705FA8MVS1 300 aaPredicted RBP16.5■□□□□ 0.23
SKP1-206ENST00000519321 AMBPP02760 352 aa16.5■□□□□ 0.23
SKP1-206ENST00000519321 STAG3L2P0CL84 134 aa16.5■□□□□ 0.23
SKP1-206ENST00000519321 STAG3L3P0CL85 134 aa16.5■□□□□ 0.23
SKP1-206ENST00000519321 RARRES2Q99969 163 aa16.5■□□□□ 0.23
SKP1-206ENST00000519321 SEC11BP0C7V7 166 aa16.49■□□□□ 0.23
SKP1-206ENST00000519321 PPP1R14DQ9NXH3 145 aa16.49■□□□□ 0.23
SKP1-206ENST00000519321 XCL2Q9UBD3 114 aa16.49■□□□□ 0.23
SKP1-206ENST00000519321 A0A1B0GVG6 124 aa16.48■□□□□ 0.23
SKP1-206ENST00000519321 ZNF705DP0CH99 300 aaPredicted RBP16.48■□□□□ 0.23
SKP1-206ENST00000519321 ZNF705BP0CI00 300 aaPredicted RBP16.48■□□□□ 0.23
SKP1-206ENST00000519321 TPT1P13693 172 aaKnown RBP16.48■□□□□ 0.23
SKP1-206ENST00000519321 ICAM4Q14773 271 aa16.48■□□□□ 0.23
SKP1-206ENST00000519321 LGALSLQ3ZCW2 172 aaPredicted RBP16.48■□□□□ 0.23
SKP1-206ENST00000519321 AMTNQ6UX39 209 aa16.48■□□□□ 0.23
SKP1-206ENST00000519321 EXOC3-AS1Q8N2X6 119 aa16.48■□□□□ 0.23
SKP1-206ENST00000519321 CSNK1G2-AS1Q8NCQ2 148 aa16.48■□□□□ 0.23
SKP1-206ENST00000519321 OR11H2Q8NH07 326 aa16.48■□□□□ 0.23
SKP1-206ENST00000519321 PHYHIPLQ96FC7 376 aa16.48■□□□□ 0.23
SKP1-206ENST00000519321 SLC35B3Q9H1N7 401 aa16.48■□□□□ 0.23
SKP1-206ENST00000519321 CTXND1A0A1B0GTU2 59 aa16.47■□□□□ 0.23
SKP1-206ENST00000519321 HMGB3O15347 200 aaKnown RBP16.47■□□□□ 0.23
SKP1-206ENST00000519321 CXorf1O96002 111 aa16.47■□□□□ 0.23
SKP1-206ENST00000519321 ARL14EPLP0DKL9 152 aa16.47■□□□□ 0.23
SKP1-206ENST00000519321 RANP62826 216 aaKnown RBP16.47■□□□□ 0.23
SKP1-206ENST00000519321 BAP18Q8IXM2 172 aa16.47■□□□□ 0.23
SKP1-206ENST00000519321 EDA2RQ9HAV5 297 aa16.47■□□□□ 0.23
SKP1-206ENST00000519321 UMAD1C9J7I0 102 aa16.46■□□□□ 0.23
SKP1-206ENST00000519321 M0R3E3 92 aa16.46■□□□□ 0.23
SKP1-206ENST00000519321 EIF3GO75821 320 aaKnown RBP eCLIP16.46■□□□□ 0.23
SKP1-206ENST00000519321 CSN1S1P47710 185 aa16.46■□□□□ 0.23
SKP1-206ENST00000519321 FXYD7P58549 80 aa16.46■□□□□ 0.23
SKP1-206ENST00000519321 ZFP69Q49AA0 526 aa16.46■□□□□ 0.23
SKP1-206ENST00000519321 FAM74A1Q5RGS3 127 aa16.46■□□□□ 0.23
SKP1-206ENST00000519321 Q9H3A6 140 aa16.46■□□□□ 0.23
SKP1-206ENST00000519321 TMEM167BQ9NRX6 74 aa16.46■□□□□ 0.23
SKP1-206ENST00000519321 PRAC2D3DTV9 90 aa16.45■□□□□ 0.22
SKP1-206ENST00000519321 BOLA2-SMG1P6H3BVE0 249 aa16.45■□□□□ 0.22
SKP1-206ENST00000519321 STOML3Q8TAV4 291 aa16.45■□□□□ 0.22
SKP1-206ENST00000519321 RXFP4Q8TDU9 374 aa16.45■□□□□ 0.22
SKP1-206ENST00000519321 ZNF705EA8MWA4 302 aaPredicted RBP16.44■□□□□ 0.22
SKP1-206ENST00000519321 GCHFRP30047 84 aa16.44■□□□□ 0.22
SKP1-206ENST00000519321 EIF5AL1Q6IS14 154 aaKnown RBP16.44■□□□□ 0.22
SKP1-206ENST00000519321 OTORQ9NRC9 128 aa16.44■□□□□ 0.22
SKP1-206ENST00000519321 NBEAL2Q6ZNJ1 2754 aa16.43■□□□□ 0.22
SKP1-206ENST00000519321 NPIPB6E9PJ23 425 aa16.43■□□□□ 0.22
SKP1-206ENST00000519321 TSPOP30536 169 aa16.43■□□□□ 0.22
SKP1-206ENST00000519321 SPINK13Q1W4C9 94 aa16.43■□□□□ 0.22
SKP1-206ENST00000519321 ARL6IP6Q8N6S5 226 aa16.43■□□□□ 0.22
SKP1-206ENST00000519321 SUN5Q8TC36 379 aa16.43■□□□□ 0.22
SKP1-206ENST00000519321 IGF2BP2-AS1Q96M15 143 aa16.43■□□□□ 0.22
SKP1-206ENST00000519321 LINC00477Q96M19 166 aa16.43■□□□□ 0.22
SKP1-206ENST00000519321 ODF3Q96PU9 254 aa16.43■□□□□ 0.22
SKP1-206ENST00000519321 GOLT1BQ9Y3E0 138 aa16.43■□□□□ 0.22
SKP1-206ENST00000519321 TENM3Q9P273 2699 aa16.42■□□□□ 0.22
SKP1-206ENST00000519321 MIFP14174 115 aa16.42■□□□□ 0.22
SKP1-206ENST00000519321 ZNF726P1Q15940 193 aa16.42■□□□□ 0.22
SKP1-206ENST00000519321 DPPA3Q6W0C5 159 aa16.42■□□□□ 0.22
SKP1-206ENST00000519321 CMTM2Q8TAZ6 248 aa16.42■□□□□ 0.22
SKP1-206ENST00000519321 M0R2Z0 102 aa16.41■□□□□ 0.22
SKP1-206ENST00000519321 INSP01308 110 aa16.41■□□□□ 0.22
SKP1-206ENST00000519321 PRB4P10163 310 aaPredicted RBP16.41■□□□□ 0.22
SKP1-206ENST00000519321 CDKN1BP46527 198 aa16.41■□□□□ 0.22
SKP1-206ENST00000519321 CD300CQ08708 224 aa16.41■□□□□ 0.22
SKP1-206ENST00000519321 ZNF705AQ6ZN79 300 aaPredicted RBP16.41■□□□□ 0.22
SKP1-206ENST00000519321 SSX7Q7RTT5 188 aa16.41■□□□□ 0.22
SKP1-206ENST00000519321 SLC51BQ86UW2 128 aa16.41■□□□□ 0.22
SKP1-206ENST00000519321 IL17DQ8TAD2 202 aa16.41■□□□□ 0.22
SKP1-206ENST00000519321 STAB2Q8WWQ8 2551 aa16.4■□□□□ 0.22
SKP1-206ENST00000519321 A0A0J9YWU9 116 aa16.4■□□□□ 0.22
SKP1-206ENST00000519321 PGPA6NDG6 321 aa16.4■□□□□ 0.22
SKP1-206ENST00000519321 SLC25A5P05141 298 aaKnown RBP16.4■□□□□ 0.22
SKP1-206ENST00000519321 LEPP41159 167 aa16.4■□□□□ 0.22
SKP1-206ENST00000519321 C9orf47Q6ZRZ4 202 aa16.4■□□□□ 0.22
SKP1-206ENST00000519321 IQCF2Q8IXL9 164 aa16.4■□□□□ 0.22
SKP1-206ENST00000519321 NEU1Q99519 415 aa16.4■□□□□ 0.22
SKP1-206ENST00000519321 C11orf68Q9H3H3 251 aaKnown RBP16.4■□□□□ 0.22
SKP1-206ENST00000519321 X6R8D5 127 aa16.4■□□□□ 0.22
SKP1-206ENST00000519321 RBAKDNA6NC62 111 aa16.39■□□□□ 0.21
SKP1-206ENST00000519321 MAP1LC3B2A6NCE7 125 aa16.39■□□□□ 0.21
SKP1-206ENST00000519321 SMIM9A6NGZ8 99 aa16.39■□□□□ 0.21
SKP1-206ENST00000519321 TMEM78Q5T7P6 136 aa16.39■□□□□ 0.21
SKP1-206ENST00000519321 C9orf62Q8N4C0 152 aa16.39■□□□□ 0.21
SKP1-206ENST00000519321 TMED6Q8WW62 240 aa16.39■□□□□ 0.21
SKP1-206ENST00000519321 MAP1LC3BQ9GZQ8 125 aa16.39■□□□□ 0.21
SKP1-206ENST00000519321 CRXO43186 299 aaPredicted RBP16.38■□□□□ 0.21
SKP1-206ENST00000519321 CT45A10P0DMU9 189 aa16.38■□□□□ 0.21
SKP1-206ENST00000519321 TMEM208Q9BTX3 173 aa16.38■□□□□ 0.21
SKP1-206ENST00000519321 AGPAT4-IT1Q9H0P7 198 aa16.38■□□□□ 0.21
SKP1-206ENST00000519321 IGHV3OR16-12A0A075B7B8 117 aa16.37■□□□□ 0.21
SKP1-206ENST00000519321 IGKV2-40A0A087WW87 121 aaPredicted RBP16.37■□□□□ 0.21
SKP1-206ENST00000519321 DIRC3C9JPN6 131 aa16.37■□□□□ 0.21
SKP1-206ENST00000519321 IGKV2D-40P01614 121 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms