RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 ODF3Q96PU9 254 aa10.76□□□□□ -0.69
LMNA-223ENST00000515459 TNFRSF18Q9Y5U5 241 aa10.76□□□□□ -0.69
LMNA-223ENST00000515459 PXMP4Q9Y6I8 212 aa10.76□□□□□ -0.69
LMNA-223ENST00000515459 H3BTX0 84 aa10.75□□□□□ -0.69
LMNA-223ENST00000515459 GOSR2O14653 212 aa10.75□□□□□ -0.69
LMNA-223ENST00000515459 SSSCA1O60232 199 aa10.75□□□□□ -0.69
LMNA-223ENST00000515459 CCNKO75909 580 aa10.75□□□□□ -0.69
LMNA-223ENST00000515459 TNFSF8P32971 234 aa10.75□□□□□ -0.69
LMNA-223ENST00000515459 C4orf46Q504U0 113 aa10.75□□□□□ -0.69
LMNA-223ENST00000515459 TOMM5Q8N4H5 51 aa10.75□□□□□ -0.69
LMNA-223ENST00000515459 ZBTB8BQ8NAP8 495 aaPredicted RBP10.75□□□□□ -0.69
LMNA-223ENST00000515459 ZNF680Q8NEM1 530 aa10.75□□□□□ -0.69
LMNA-223ENST00000515459 SMIM8Q96KF7 97 aa10.75□□□□□ -0.69
LMNA-223ENST00000515459 GSN-AS1Q9NRJ2 163 aa10.75□□□□□ -0.69
LMNA-223ENST00000515459 MGAT4CQ9UBM8 478 aa10.75□□□□□ -0.69
LMNA-223ENST00000515459 FUT9Q9Y231 359 aa10.75□□□□□ -0.69
LMNA-223ENST00000515459 ICOSQ9Y6W8 199 aa10.75□□□□□ -0.69
LMNA-223ENST00000515459 A0A087WTM6 91 aa10.74□□□□□ -0.69
LMNA-223ENST00000515459 TRGV1A0A0A0MS02 117 aa10.74□□□□□ -0.69
LMNA-223ENST00000515459 LINC00854A0A1B0GVQ3 168 aa10.74□□□□□ -0.69
LMNA-223ENST00000515459 METTL15P1P0C7V9 234 aa10.74□□□□□ -0.69
LMNA-223ENST00000515459 DNAH10OSP0CZ25 163 aa10.74□□□□□ -0.69
LMNA-223ENST00000515459 ICAM4Q14773 271 aa10.74□□□□□ -0.69
LMNA-223ENST00000515459 TMEM14EPQ6UXP3 125 aa10.74□□□□□ -0.69
LMNA-223ENST00000515459 ZNF546Q86UE3 836 aa10.74□□□□□ -0.69
LMNA-223ENST00000515459 OR10P1Q8NGE3 313 aa10.74□□□□□ -0.69
LMNA-223ENST00000515459 MCFD2Q8NI22 146 aa10.74□□□□□ -0.69
LMNA-223ENST00000515459 TRIM63Q969Q1 353 aa10.74□□□□□ -0.69
LMNA-223ENST00000515459 NPIPB6E9PJ23 425 aa10.73□□□□□ -0.69
LMNA-223ENST00000515459 AGPAT2O15120 278 aa10.73□□□□□ -0.69
LMNA-223ENST00000515459 PAX4O43316 350 aa10.73□□□□□ -0.69
LMNA-223ENST00000515459 COX7A2P2O60397 106 aa10.73□□□□□ -0.69
LMNA-223ENST00000515459 ZNF324O75467 553 aaPredicted RBP10.73□□□□□ -0.69
LMNA-223ENST00000515459 SMR3BP02814 79 aaPredicted RBP10.73□□□□□ -0.69
LMNA-223ENST00000515459 SLC25A5P05141 298 aaKnown RBP10.73□□□□□ -0.69
LMNA-223ENST00000515459 IGLC2P0DOY2 106 aa10.73□□□□□ -0.69
LMNA-223ENST00000515459 C11orf72Q8NBR9 251 aa10.73□□□□□ -0.69
LMNA-223ENST00000515459 RAB2BQ8WUD1 216 aa10.73□□□□□ -0.69
LMNA-223ENST00000515459 SAT2Q96F10 170 aaPredicted RBP10.73□□□□□ -0.69
LMNA-223ENST00000515459 TRAV9-2A0A087WT02 112 aa10.72□□□□□ -0.69
LMNA-223ENST00000515459 H3BQ15 152 aa10.72□□□□□ -0.69
LMNA-223ENST00000515459 OPCMLQ14982 345 aa10.72□□□□□ -0.69
LMNA-223ENST00000515459 MORN5Q5VZ52 161 aa10.72□□□□□ -0.69
LMNA-223ENST00000515459 TMEM37Q8WXS4 190 aa10.72□□□□□ -0.69
LMNA-223ENST00000515459 MRPS26Q9BYN8 205 aaKnown RBP10.72□□□□□ -0.69
LMNA-223ENST00000515459 SLIRPQ9GZT3 109 aaKnown RBP10.72□□□□□ -0.69
LMNA-223ENST00000515459 MDFICQ9P1T7 246 aa10.72□□□□□ -0.69
LMNA-223ENST00000515459 C7orf71A4D174 169 aa10.71□□□□□ -0.69
LMNA-223ENST00000515459 FAM229AH3BQW9 127 aa10.71□□□□□ -0.69
LMNA-223ENST00000515459 UBE2MP61081 183 aaKnown RBP10.71□□□□□ -0.69
LMNA-223ENST00000515459 GUK1Q16774 197 aa10.71□□□□□ -0.69
LMNA-223ENST00000515459 PYDC2Q56P42 97 aa10.71□□□□□ -0.69
LMNA-223ENST00000515459 FLG2Q5D862 2391 aaPredicted RBP10.71□□□□□ -0.69
LMNA-223ENST00000515459 C10orf113Q5VZT2 155 aa10.71□□□□□ -0.69
LMNA-223ENST00000515459 EIF4E3Q8N5X7 224 aaKnown RBP10.71□□□□□ -0.69
LMNA-223ENST00000515459 DEDD2Q8WXF8 326 aa10.71□□□□□ -0.69
LMNA-223ENST00000515459 ST6GAL2Q96JF0 529 aa10.71□□□□□ -0.69
LMNA-223ENST00000515459 LINC00467Q9BRT7 94 aa10.71□□□□□ -0.69
LMNA-223ENST00000515459 C9orf170A2RU37 121 aa10.7□□□□□ -0.7
LMNA-223ENST00000515459 SPINK4O60575 86 aa10.7□□□□□ -0.7
LMNA-223ENST00000515459 GCSHP23434 173 aa10.7□□□□□ -0.7
LMNA-223ENST00000515459 ANXA2RQ3ZCQ2 193 aa10.7□□□□□ -0.7
LMNA-223ENST00000515459 LYPD5Q6UWN5 251 aa10.7□□□□□ -0.7
LMNA-223ENST00000515459 BCL7BQ9BQE9 202 aa10.7□□□□□ -0.7
LMNA-223ENST00000515459 PRO0255Q9UI72 69 aa10.7□□□□□ -0.7
LMNA-223ENST00000515459 KLF12Q9Y4X4 402 aa10.7□□□□□ -0.7
LMNA-223ENST00000515459 LY96Q9Y6Y9 160 aa10.7□□□□□ -0.7
LMNA-223ENST00000515459 VPS13BQ7Z7G8 4022 aa10.69□□□□□ -0.7
LMNA-223ENST00000515459 FAT1Q14517 4588 aa10.69□□□□□ -0.7
LMNA-223ENST00000515459 KLLNB2CW77 178 aa10.69□□□□□ -0.7
LMNA-223ENST00000515459 K7EP13 123 aa10.69□□□□□ -0.7
LMNA-223ENST00000515459 TSC22D2O75157 780 aa10.69□□□□□ -0.7
LMNA-223ENST00000515459 TMBIM6P55061 237 aa10.69□□□□□ -0.7
LMNA-223ENST00000515459 TCL1AP56279 114 aa10.69□□□□□ -0.7
LMNA-223ENST00000515459 TAS2R30P59541 319 aa10.69□□□□□ -0.7
LMNA-223ENST00000515459 SLAQ13239 276 aa10.69□□□□□ -0.7
LMNA-223ENST00000515459 MRPL23Q16540 153 aaKnown RBP10.69□□□□□ -0.7
LMNA-223ENST00000515459 Q6ZSN1 163 aa10.69□□□□□ -0.7
LMNA-223ENST00000515459 MGST2Q99735 147 aa10.69□□□□□ -0.7
LMNA-223ENST00000515459 GGACTQ9BVM4 153 aa10.69□□□□□ -0.7
LMNA-223ENST00000515459 DNAJC4Q9NNZ3 241 aa10.69□□□□□ -0.7
LMNA-223ENST00000515459 MSRB1Q9NZV6 116 aa10.69□□□□□ -0.7
LMNA-223ENST00000515459 SCGB1D2O95969 90 aa10.68□□□□□ -0.7
LMNA-223ENST00000515459 IGHV3-53P01767 116 aa10.68□□□□□ -0.7
LMNA-223ENST00000515459 CRYBA4P53673 196 aa10.68□□□□□ -0.7
LMNA-223ENST00000515459 IBA57Q5T440 356 aaKnown RBP10.68□□□□□ -0.7
LMNA-223ENST00000515459 Q6ZRG5 221 aa10.68□□□□□ -0.7
LMNA-223ENST00000515459 NEGR1Q7Z3B1 354 aa10.68□□□□□ -0.7
LMNA-223ENST00000515459 HHLA3Q9XRX5 114 aa10.68□□□□□ -0.7
LMNA-223ENST00000515459 MYCBP2O75592 4640 aa10.68□□□□□ -0.7
LMNA-223ENST00000515459 TRAV5A0A0B4J249 113 aa10.67□□□□□ -0.7
LMNA-223ENST00000515459 PRAF2O60831 178 aa10.67□□□□□ -0.7
LMNA-223ENST00000515459 ZNF253O75346 499 aa10.67□□□□□ -0.7
LMNA-223ENST00000515459 MPDU1O75352 247 aa10.67□□□□□ -0.7
LMNA-223ENST00000515459 OR4E1P0C645 316 aa10.67□□□□□ -0.7
LMNA-223ENST00000515459 RNASE4P34096 147 aaKnown RBP10.67□□□□□ -0.7
LMNA-223ENST00000515459 CD300CQ08708 224 aa10.67□□□□□ -0.7
LMNA-223ENST00000515459 ARL16Q0P5N6 197 aa10.67□□□□□ -0.7
LMNA-223ENST00000515459 ERCC8Q13216 396 aa10.67□□□□□ -0.7
LMNA-223ENST00000515459 BTN1A1Q13410 526 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms