RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 ZNF546Q86UE3 836 aa7.63□□□□□ -1.19
RNF4-218ENST00000513284 CCDC28AQ8IWP9 274 aa7.63□□□□□ -1.19
RNF4-218ENST00000513284 RNF182Q8N6D2 247 aa7.63□□□□□ -1.19
RNF4-218ENST00000513284 SYT8Q8NBV8 401 aa7.63□□□□□ -1.19
RNF4-218ENST00000513284 GNPNAT1Q96EK6 184 aaPredicted RBP7.63□□□□□ -1.19
RNF4-218ENST00000513284 SMIM8Q96KF7 97 aa7.63□□□□□ -1.19
RNF4-218ENST00000513284 ARL6Q9H0F7 186 aa7.63□□□□□ -1.19
RNF4-218ENST00000513284 ARV1Q9H2C2 271 aa7.63□□□□□ -1.19
RNF4-218ENST00000513284 NDUFA13Q9P0J0 144 aa7.63□□□□□ -1.19
RNF4-218ENST00000513284 TRAV12-2A0A075B6T6 113 aa7.62□□□□□ -1.19
RNF4-218ENST00000513284 TRAV8-2A0A0B4J237 113 aa7.62□□□□□ -1.19
RNF4-218ENST00000513284 A0A0J9YY99 117 aa7.62□□□□□ -1.19
RNF4-218ENST00000513284 H7BYZ3 331 aa7.62□□□□□ -1.19
RNF4-218ENST00000513284 PLA2G10O15496 165 aa7.62□□□□□ -1.19
RNF4-218ENST00000513284 SCGB1D2O95969 90 aa7.62□□□□□ -1.19
RNF4-218ENST00000513284 IL7P13232 177 aa7.62□□□□□ -1.19
RNF4-218ENST00000513284 HTN1P15515 57 aa7.62□□□□□ -1.19
RNF4-218ENST00000513284 TAS2R30P59541 319 aa7.62□□□□□ -1.19
RNF4-218ENST00000513284 ERVFC1-1P60608 527 aa7.62□□□□□ -1.19
RNF4-218ENST00000513284 RRAS2P62070 204 aaPredicted RBP7.62□□□□□ -1.19
RNF4-218ENST00000513284 OR5I1Q13606 314 aa7.62□□□□□ -1.19
RNF4-218ENST00000513284 CNPY1Q3B7I2 92 aa7.62□□□□□ -1.19
RNF4-218ENST00000513284 IGFL4Q6B9Z1 124 aa7.62□□□□□ -1.19
RNF4-218ENST00000513284 BPIFA4PQ86YQ2 179 aa7.62□□□□□ -1.19
RNF4-218ENST00000513284 TMEM263Q8WUH6 116 aaKnown RBP7.62□□□□□ -1.19
RNF4-218ENST00000513284 RPUSD4Q96CM3 377 aaKnown RBP7.62□□□□□ -1.19
RNF4-218ENST00000513284 GGACTQ9BVM4 153 aa7.62□□□□□ -1.19
RNF4-218ENST00000513284 FAM30AQ9NZY2 134 aa7.62□□□□□ -1.19
RNF4-218ENST00000513284 PLA2G2DQ9UNK4 145 aa7.62□□□□□ -1.19
RNF4-218ENST00000513284 RNF213Q63HN8 5207 aa7.62□□□□□ -1.19
RNF4-218ENST00000513284 K7EPK0 472 aa7.61□□□□□ -1.19
RNF4-218ENST00000513284 EREGO14944 169 aa7.61□□□□□ -1.19
RNF4-218ENST00000513284 TSC22D2O75157 780 aa7.61□□□□□ -1.19
RNF4-218ENST00000513284 METTL15P1P0C7V9 234 aa7.61□□□□□ -1.19
RNF4-218ENST00000513284 RAB31Q13636 194 aa7.61□□□□□ -1.19
RNF4-218ENST00000513284 C4orf46Q504U0 113 aa7.61□□□□□ -1.19
RNF4-218ENST00000513284 TMEM14EPQ6UXP3 125 aa7.61□□□□□ -1.19
RNF4-218ENST00000513284 PMS2P5A8MQ11 134 aa7.6□□□□□ -1.19
RNF4-218ENST00000513284 SNURFLB1AK76 121 aa7.6□□□□□ -1.19
RNF4-218ENST00000513284 L7N2F9 121 aa7.6□□□□□ -1.19
RNF4-218ENST00000513284 COX7A2P2O60397 106 aa7.6□□□□□ -1.19
RNF4-218ENST00000513284 M6PRP20645 277 aa7.6□□□□□ -1.19
RNF4-218ENST00000513284 VAMP2P63027 116 aa7.6□□□□□ -1.19
RNF4-218ENST00000513284 SLC38A11Q08AI6 406 aa7.6□□□□□ -1.19
RNF4-218ENST00000513284 IAH1Q2TAA2 248 aaPredicted RBP7.6□□□□□ -1.19
RNF4-218ENST00000513284 Q6ZRG5 221 aa7.6□□□□□ -1.19
RNF4-218ENST00000513284 LINC00305Q7Z4B0 112 aa7.6□□□□□ -1.19
RNF4-218ENST00000513284 LINC00612Q8N6U2 182 aa7.6□□□□□ -1.19
RNF4-218ENST00000513284 ZNF331Q9NQX6 463 aaPredicted RBP7.6□□□□□ -1.19
RNF4-218ENST00000513284 PXMP4Q9Y6I8 212 aa7.6□□□□□ -1.19
RNF4-218ENST00000513284 RLN2P04090 185 aa7.59□□□□□ -1.19
RNF4-218ENST00000513284 ZNF846Q147U1 533 aa7.59□□□□□ -1.19
RNF4-218ENST00000513284 RNASE8Q8TDE3 154 aaKnown RBP7.59□□□□□ -1.19
RNF4-218ENST00000513284 MITD1Q8WV92 249 aa7.59□□□□□ -1.19
RNF4-218ENST00000513284 VSIG2Q96IQ7 327 aa7.59□□□□□ -1.19
RNF4-218ENST00000513284 NOP10Q9NPE3 64 aaKnown RBP7.59□□□□□ -1.19
RNF4-218ENST00000513284 GSKIPQ9P0R6 139 aa7.59□□□□□ -1.19
RNF4-218ENST00000513284 A0A096LPF7 62 aa7.58□□□□□ -1.2
RNF4-218ENST00000513284 H3BNG1 76 aa7.58□□□□□ -1.2
RNF4-218ENST00000513284 AGPAT2O15120 278 aa7.58□□□□□ -1.2
RNF4-218ENST00000513284 LYRM1O43325 122 aa7.58□□□□□ -1.2
RNF4-218ENST00000513284 LEPP41159 167 aa7.58□□□□□ -1.2
RNF4-218ENST00000513284 GUK1Q16774 197 aa7.58□□□□□ -1.2
RNF4-218ENST00000513284 C10orf113Q5VZT2 155 aa7.58□□□□□ -1.2
RNF4-218ENST00000513284 OR1L4Q8NGR5 311 aa7.58□□□□□ -1.2
RNF4-218ENST00000513284 PFDN5Q99471 154 aa7.58□□□□□ -1.2
RNF4-218ENST00000513284 TMEM70Q9BUB7 260 aa7.58□□□□□ -1.2
RNF4-218ENST00000513284 MRPS12O15235 138 aaKnown RBP7.57□□□□□ -1.2
RNF4-218ENST00000513284 SIVA1O15304 175 aa7.57□□□□□ -1.2
RNF4-218ENST00000513284 TCRBP04435 133 aa7.57□□□□□ -1.2
RNF4-218ENST00000513284 PVALBP20472 110 aaPredicted RBP7.57□□□□□ -1.2
RNF4-218ENST00000513284 BCAP31P51572 246 aa7.57□□□□□ -1.2
RNF4-218ENST00000513284 C12orf45Q8N5I9 185 aaPredicted RBP7.57□□□□□ -1.2
RNF4-218ENST00000513284 ZBTB8BQ8NAP8 495 aaPredicted RBP7.57□□□□□ -1.2
RNF4-218ENST00000513284 DEFB104AQ8WTQ1 72 aa7.57□□□□□ -1.2
RNF4-218ENST00000513284 ODF3Q96PU9 254 aa7.57□□□□□ -1.2
RNF4-218ENST00000513284 PYGO2Q9BRQ0 406 aa7.57□□□□□ -1.2
RNF4-218ENST00000513284 C20orf85Q9H1P6 137 aa7.57□□□□□ -1.2
RNF4-218ENST00000513284 CCNKO75909 580 aa7.56□□□□□ -1.2
RNF4-218ENST00000513284 CAMLGP49069 296 aa7.56□□□□□ -1.2
RNF4-218ENST00000513284 KRTAP10-4P60372 401 aaPredicted RBP7.56□□□□□ -1.2
RNF4-218ENST00000513284 PATE2Q6UY27 113 aa7.56□□□□□ -1.2
RNF4-218ENST00000513284 LINC00299Q6ZSB3 139 aa7.56□□□□□ -1.2
RNF4-218ENST00000513284 DNAJC4Q9NNZ3 241 aa7.56□□□□□ -1.2
RNF4-218ENST00000513284 RCL1Q9Y2P8 373 aaKnown RBP7.56□□□□□ -1.2
RNF4-218ENST00000513284 LRP2P98164 4655 aa7.55□□□□□ -1.2
RNF4-218ENST00000513284 TRAV6A0A075B6T7 132 aa7.55□□□□□ -1.2
RNF4-218ENST00000513284 GAGE12BA1L429 117 aa7.55□□□□□ -1.2
RNF4-218ENST00000513284 C7orf66A4D0T2 115 aa7.55□□□□□ -1.2
RNF4-218ENST00000513284 ZNF253O75346 499 aa7.55□□□□□ -1.2
RNF4-218ENST00000513284 GAGE7O76087 117 aa7.55□□□□□ -1.2
RNF4-218ENST00000513284 MBPP02686 304 aaPredicted RBP7.55□□□□□ -1.2
RNF4-218ENST00000513284 GAGE12FP0CL80 117 aa7.55□□□□□ -1.2
RNF4-218ENST00000513284 GAGE12GP0CL81 117 aa7.55□□□□□ -1.2
RNF4-218ENST00000513284 GAGE12IP0CL82 117 aa7.55□□□□□ -1.2
RNF4-218ENST00000513284 CAV2P51636 162 aa7.55□□□□□ -1.2
RNF4-218ENST00000513284 GFI1BQ5VTD9 330 aa7.55□□□□□ -1.2
RNF4-218ENST00000513284 ZNF680Q8NEM1 530 aa7.55□□□□□ -1.2
RNF4-218ENST00000513284 MRPL53Q96EL3 112 aaKnown RBP7.55□□□□□ -1.2
RNF4-218ENST00000513284 CCDC32Q9BV29 185 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms