RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 TMEM258P61165 79 aa4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 HIST1H2BCP62807 126 aa4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 GNB2P62879 340 aa4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 RPL30P62888 115 aaKnown RBP4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 HIST2H2BEQ16778 126 aa4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 OR4B1Q8NGF8 309 aa4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 MPLKIPQ8TAP9 179 aa4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 HIST1H2BHQ93079 126 aa4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 HIST1H2BNQ99877 126 aa4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 HIST1H2BMQ99879 126 aa4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 CHAC1Q9BUX1 264 aa4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 ARID1BQ8NFD5 2236 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 A0A087X002 238 aa4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 SPTY2D1-AS1A0A0U1RR47 76 aa4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 H3BQ15 152 aa4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 SYNGR2O43760 224 aa4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 HRASP01112 189 aa4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 ZNF688P0C7X2 276 aa4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 PATE4P0C8F1 98 aa4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 POLR2JP52435 117 aaKnown RBP4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 CYCSP99999 105 aaKnown RBP4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 ZNF90Q03938 601 aa4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 TMEM91Q6ZNR0 172 aa4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 DEFB119Q8N690 84 aa4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 RBMXL1Q96E39 390 aaKnown RBP4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 C8orf17Q9NRJ1 99 aa4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 TAC3Q9UHF0 121 aa4.49□□□□□ -1.69
TRAPPC11-209ENST00000512476 A0A1W2PP18 115 aa4.48□□□□□ -1.69
TRAPPC11-209ENST00000512476 PINLYPA6NC86 204 aa4.48□□□□□ -1.69
TRAPPC11-209ENST00000512476 EPM2AB3EWF7 344 aa4.48□□□□□ -1.69
TRAPPC11-209ENST00000512476 SRP19P09132 144 aaKnown RBP4.48□□□□□ -1.69
TRAPPC11-209ENST00000512476 PYYP10082 97 aa4.48□□□□□ -1.69
TRAPPC11-209ENST00000512476 OTOSQ8NHW6 89 aa4.48□□□□□ -1.69
TRAPPC11-209ENST00000512476 GTSF1Q8WW33 167 aa4.48□□□□□ -1.69
TRAPPC11-209ENST00000512476 DSCR8Q96T75 97 aa4.48□□□□□ -1.69
TRAPPC11-209ENST00000512476 MPC1Q9Y5U8 109 aa4.48□□□□□ -1.69
TRAPPC11-209ENST00000512476 FXYD1O00168 92 aa4.48□□□□□ -1.69
TRAPPC11-209ENST00000512476 PRM2P04554 102 aa4.48□□□□□ -1.69
TRAPPC11-209ENST00000512476 TRGC1P0CF51 173 aa4.48□□□□□ -1.69
TRAPPC11-209ENST00000512476 PEBP1P30086 187 aaKnown RBP4.48□□□□□ -1.69
TRAPPC11-209ENST00000512476 RNASE4P34096 147 aaKnown RBP4.48□□□□□ -1.69
TRAPPC11-209ENST00000512476 KLRD1Q13241 179 aa4.48□□□□□ -1.69
TRAPPC11-209ENST00000512476 COA6Q5JTJ3 125 aaKnown RBP4.48□□□□□ -1.69
TRAPPC11-209ENST00000512476 NOXRED1Q6NXP6 359 aa4.48□□□□□ -1.69
TRAPPC11-209ENST00000512476 SCXQ7RTU7 201 aa4.48□□□□□ -1.69
TRAPPC11-209ENST00000512476 SPATA12Q7Z6I5 190 aa4.48□□□□□ -1.69
TRAPPC11-209ENST00000512476 ZNF835Q9Y2P0 537 aa4.48□□□□□ -1.69
TRAPPC11-209ENST00000512476 RER1O15258 196 aa4.47□□□□□ -1.69
TRAPPC11-209ENST00000512476 LY6G6DO95868 133 aa4.47□□□□□ -1.69
TRAPPC11-209ENST00000512476 ZNF32P17041 273 aa4.47□□□□□ -1.69
TRAPPC11-209ENST00000512476 CLDND2Q8NHS1 167 aa4.47□□□□□ -1.69
TRAPPC11-209ENST00000512476 AGPAT4-IT1Q9H0P7 198 aa4.47□□□□□ -1.69
TRAPPC11-209ENST00000512476 LINC00588Q9Y4M8 146 aa4.47□□□□□ -1.69
TRAPPC11-209ENST00000512476 TRAV1-1A0A0B4J248 108 aa4.47□□□□□ -1.69
TRAPPC11-209ENST00000512476 IRGMA1A4Y4 181 aa4.47□□□□□ -1.69
TRAPPC11-209ENST00000512476 MEIS3P1A6NDR6 274 aa4.47□□□□□ -1.69
TRAPPC11-209ENST00000512476 PDCD5O14737 125 aa4.47□□□□□ -1.69
TRAPPC11-209ENST00000512476 QRFPP83859 136 aa4.47□□□□□ -1.69
TRAPPC11-209ENST00000512476 ZNF846Q147U1 533 aa4.47□□□□□ -1.69
TRAPPC11-209ENST00000512476 PEA15Q15121 130 aa4.47□□□□□ -1.69
TRAPPC11-209ENST00000512476 MPV17L2Q567V2 206 aa4.47□□□□□ -1.69
TRAPPC11-209ENST00000512476 C6orf52Q5T4I8 152 aa4.47□□□□□ -1.69
TRAPPC11-209ENST00000512476 TEN1Q86WV5 123 aa4.47□□□□□ -1.69
TRAPPC11-209ENST00000512476 SVBPQ8N300 66 aa4.47□□□□□ -1.69
TRAPPC11-209ENST00000512476 SLC25A29Q8N8R3 303 aa4.47□□□□□ -1.69
TRAPPC11-209ENST00000512476 Q8NBF4 154 aa4.47□□□□□ -1.69
TRAPPC11-209ENST00000512476 OR4X2Q8NGF9 303 aa4.47□□□□□ -1.69
TRAPPC11-209ENST00000512476 PATE1Q8WXA2 126 aa4.47□□□□□ -1.69
TRAPPC11-209ENST00000512476 DUSP21Q9H596 190 aa4.47□□□□□ -1.69
TRAPPC11-209ENST00000512476 ZNF318Q5VUA4 2279 aa4.47□□□□□ -1.69
TRAPPC11-209ENST00000512476 HLA-DMBP28068 263 aa4.46□□□□□ -1.69
TRAPPC11-209ENST00000512476 PHF5AQ7RTV0 110 aaKnown RBP4.46□□□□□ -1.69
TRAPPC11-209ENST00000512476 COMMD6Q7Z4G1 85 aa4.46□□□□□ -1.69
TRAPPC11-209ENST00000512476 HIST3H2BBQ8N257 126 aa4.46□□□□□ -1.69
TRAPPC11-209ENST00000512476 C10orf105Q8TEF2 133 aa4.46□□□□□ -1.69
TRAPPC11-209ENST00000512476 PRUNE2Q8WUY3 3088 aa4.46□□□□□ -1.7
TRAPPC11-209ENST00000512476 EML5Q05BV3 1969 aa4.46□□□□□ -1.7
TRAPPC11-209ENST00000512476 IGLV8-61A0A075B6I0 122 aa4.46□□□□□ -1.7
TRAPPC11-209ENST00000512476 INS-IGF2F8WCM5 200 aa4.46□□□□□ -1.7
TRAPPC11-209ENST00000512476 HLA-DRB4P13762 266 aa4.46□□□□□ -1.7
TRAPPC11-209ENST00000512476 S100A3P33764 101 aa4.46□□□□□ -1.7
TRAPPC11-209ENST00000512476 CSN1S1P47710 185 aa4.46□□□□□ -1.7
TRAPPC11-209ENST00000512476 FGF12P61328 243 aa4.46□□□□□ -1.7
TRAPPC11-209ENST00000512476 SOSTDC1Q6X4U4 206 aa4.46□□□□□ -1.7
TRAPPC11-209ENST00000512476 Q8N7P7 452 aa4.46□□□□□ -1.7
TRAPPC11-209ENST00000512476 ZNF414Q96IQ9 312 aa4.46□□□□□ -1.7
TRAPPC11-209ENST00000512476 BET1LQ9NYM9 111 aa4.46□□□□□ -1.7
TRAPPC11-209ENST00000512476 DPM3Q9P2X0 92 aa4.46□□□□□ -1.7
TRAPPC11-209ENST00000512476 HLA-DRB4X5D2U9 266 aa4.46□□□□□ -1.7
TRAPPC11-209ENST00000512476 IGHV3-72A0A0B4J1Y9 119 aa4.45□□□□□ -1.7
TRAPPC11-209ENST00000512476 TRBV27A0A0K0K1C4 114 aa4.45□□□□□ -1.7
TRAPPC11-209ENST00000512476 TRAPPC2P0DI81 140 aa4.45□□□□□ -1.7
TRAPPC11-209ENST00000512476 TRAPPC2BP0DI82 140 aa4.45□□□□□ -1.7
TRAPPC11-209ENST00000512476 SRP14P37108 136 aaKnown RBP4.45□□□□□ -1.7
TRAPPC11-209ENST00000512476 SNCAP37840 140 aa4.45□□□□□ -1.7
TRAPPC11-209ENST00000512476 DYNLT3P51808 116 aa4.45□□□□□ -1.7
TRAPPC11-209ENST00000512476 FAM104BQ5XKR9 115 aa4.45□□□□□ -1.7
TRAPPC11-209ENST00000512476 LYPD2Q6UXB3 125 aa4.45□□□□□ -1.7
TRAPPC11-209ENST00000512476 ARPINQ7Z6K5 226 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms