RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 IGHV4-28A0A0C4DH34 117 aa6.34□□□□□ -1.39
PDLIM5-213ENST00000509357 A0A0J9YX75 114 aa6.34□□□□□ -1.39
PDLIM5-213ENST00000509357 C17orf112F2Z3M2 114 aa6.34□□□□□ -1.39
PDLIM5-213ENST00000509357 ISLRO14498 428 aa6.34□□□□□ -1.39
PDLIM5-213ENST00000509357 HLA-DRB4P13762 266 aa6.34□□□□□ -1.39
PDLIM5-213ENST00000509357 MIFP14174 115 aa6.34□□□□□ -1.39
PDLIM5-213ENST00000509357 M6PRP20645 277 aa6.34□□□□□ -1.39
PDLIM5-213ENST00000509357 FXYD7P58549 80 aa6.34□□□□□ -1.39
PDLIM5-213ENST00000509357 KIR3DS1Q14943 382 aa6.34□□□□□ -1.39
PDLIM5-213ENST00000509357 FOXI2Q6ZQN5 318 aa6.34□□□□□ -1.39
PDLIM5-213ENST00000509357 EXOC3-AS1Q8N2X6 119 aa6.34□□□□□ -1.39
PDLIM5-213ENST00000509357 OR10G4Q8NGN3 311 aa6.34□□□□□ -1.39
PDLIM5-213ENST00000509357 OR10G9Q8NGN4 311 aa6.34□□□□□ -1.39
PDLIM5-213ENST00000509357 OR10G7Q8NGN6 311 aa6.34□□□□□ -1.39
PDLIM5-213ENST00000509357 LRRC20Q8TCA0 184 aa6.34□□□□□ -1.39
PDLIM5-213ENST00000509357 GPR82Q96P67 336 aa6.34□□□□□ -1.39
PDLIM5-213ENST00000509357 MRPL32Q9BYC8 188 aaKnown RBP6.34□□□□□ -1.39
PDLIM5-213ENST00000509357 SAV1Q9H4B6 383 aaPredicted RBP6.34□□□□□ -1.39
PDLIM5-213ENST00000509357 HLA-DRB4X5D2U9 266 aa6.34□□□□□ -1.39
PDLIM5-213ENST00000509357 ALMS1Q8TCU4 4167 aa6.34□□□□□ -1.39
PDLIM5-213ENST00000509357 HYDINQ4G0P3 5121 aa6.34□□□□□ -1.4
PDLIM5-213ENST00000509357 A0A0D9SG52 128 aa6.33□□□□□ -1.4
PDLIM5-213ENST00000509357 BOLA2-SMG1P6H3BVE0 249 aa6.33□□□□□ -1.4
PDLIM5-213ENST00000509357 STAG3L2P0CL84 134 aa6.33□□□□□ -1.4
PDLIM5-213ENST00000509357 STAG3L3P0CL85 134 aa6.33□□□□□ -1.4
PDLIM5-213ENST00000509357 RBMY1A1P0DJD3 496 aaKnown RBP6.33□□□□□ -1.4
PDLIM5-213ENST00000509357 RBMY1CP0DJD4 496 aa6.33□□□□□ -1.4
PDLIM5-213ENST00000509357 RBMY1FQ15415 496 aaKnown RBP6.33□□□□□ -1.4
PDLIM5-213ENST00000509357 BPIFA4PQ86YQ2 179 aa6.33□□□□□ -1.4
PDLIM5-213ENST00000509357 CSNK1G2-AS1Q8NCQ2 148 aa6.33□□□□□ -1.4
PDLIM5-213ENST00000509357 STOML3Q8TAV4 291 aa6.33□□□□□ -1.4
PDLIM5-213ENST00000509357 SUN5Q8TC36 379 aa6.33□□□□□ -1.4
PDLIM5-213ENST00000509357 BLNKQ8WV28 456 aa6.33□□□□□ -1.4
PDLIM5-213ENST00000509357 RAB24Q969Q5 203 aa6.33□□□□□ -1.4
PDLIM5-213ENST00000509357 SLC35B3Q9H1N7 401 aa6.33□□□□□ -1.4
PDLIM5-213ENST00000509357 TMPRSS5Q9H3S3 457 aa6.33□□□□□ -1.4
PDLIM5-213ENST00000509357 RNF24Q9Y225 148 aa6.33□□□□□ -1.4
PDLIM5-213ENST00000509357 TAAR5O14804 337 aa6.32□□□□□ -1.4
PDLIM5-213ENST00000509357 CRXO43186 299 aaPredicted RBP6.32□□□□□ -1.4
PDLIM5-213ENST00000509357 ARL14EPLP0DKL9 152 aa6.32□□□□□ -1.4
PDLIM5-213ENST00000509357 HIST1H1EP10412 219 aaKnown RBP6.32□□□□□ -1.4
PDLIM5-213ENST00000509357 CDC34P49427 236 aaPredicted RBP6.32□□□□□ -1.4
PDLIM5-213ENST00000509357 EMP1P54849 157 aa6.32□□□□□ -1.4
PDLIM5-213ENST00000509357 PSG9Q00887 426 aa6.32□□□□□ -1.4
PDLIM5-213ENST00000509357 PSG3Q16557 428 aa6.32□□□□□ -1.4
PDLIM5-213ENST00000509357 ACOT6Q3I5F7 207 aaPredicted RBP6.32□□□□□ -1.4
PDLIM5-213ENST00000509357 LCN15Q6UWW0 184 aa6.32□□□□□ -1.4
PDLIM5-213ENST00000509357 Q6ZQT7 251 aa6.32□□□□□ -1.4
PDLIM5-213ENST00000509357 Q8NAQ8 132 aa6.32□□□□□ -1.4
PDLIM5-213ENST00000509357 C2CD4CQ8TF44 421 aa6.32□□□□□ -1.4
PDLIM5-213ENST00000509357 RNF141Q8WVD5 230 aa6.32□□□□□ -1.4
PDLIM5-213ENST00000509357 TMED6Q8WW62 240 aa6.32□□□□□ -1.4
PDLIM5-213ENST00000509357 PAXXQ9BUH6 204 aa6.32□□□□□ -1.4
PDLIM5-213ENST00000509357 ZNF471Q9BX82 626 aaPredicted RBP6.32□□□□□ -1.4
PDLIM5-213ENST00000509357 OR51M1Q9H341 326 aa6.32□□□□□ -1.4
PDLIM5-213ENST00000509357 BORCS7-ASMTA0A0B4J1R7 106 aa6.31□□□□□ -1.4
PDLIM5-213ENST00000509357 ZNF705EA8MWA4 302 aaPredicted RBP6.31□□□□□ -1.4
PDLIM5-213ENST00000509357 IGLL5B9A064 214 aa6.31□□□□□ -1.4
PDLIM5-213ENST00000509357 OR7C2O60412 319 aa6.31□□□□□ -1.4
PDLIM5-213ENST00000509357 ZNF253O75346 499 aa6.31□□□□□ -1.4
PDLIM5-213ENST00000509357 DUSP14O95147 198 aaKnown RBP6.31□□□□□ -1.4
PDLIM5-213ENST00000509357 PRM2P04554 102 aa6.31□□□□□ -1.4
PDLIM5-213ENST00000509357 NBEAP1P0C6P0 100 aa6.31□□□□□ -1.4
PDLIM5-213ENST00000509357 CNN1P51911 297 aaKnown RBP6.31□□□□□ -1.4
PDLIM5-213ENST00000509357 FGF8P55075 233 aaPredicted RBP6.31□□□□□ -1.4
PDLIM5-213ENST00000509357 RHOBP62745 196 aa6.31□□□□□ -1.4
PDLIM5-213ENST00000509357 SERF2P84101 59 aa6.31□□□□□ -1.4
PDLIM5-213ENST00000509357 ERCC8Q13216 396 aa6.31□□□□□ -1.4
PDLIM5-213ENST00000509357 ZFP69Q49AA0 526 aa6.31□□□□□ -1.4
PDLIM5-213ENST00000509357 FAM74A1Q5RGS3 127 aa6.31□□□□□ -1.4
PDLIM5-213ENST00000509357 ZNF738Q8NE65 137 aa6.31□□□□□ -1.4
PDLIM5-213ENST00000509357 LINC00476Q8WZB0 136 aa6.31□□□□□ -1.4
PDLIM5-213ENST00000509357 HYLS1Q96M11 299 aa6.31□□□□□ -1.4
PDLIM5-213ENST00000509357 TMEM208Q9BTX3 173 aa6.31□□□□□ -1.4
PDLIM5-213ENST00000509357 KCNIP2Q9NS61 270 aa6.31□□□□□ -1.4
PDLIM5-213ENST00000509357 PPP1R14DQ9NXH3 145 aa6.31□□□□□ -1.4
PDLIM5-213ENST00000509357 GOLT1BQ9Y3E0 138 aa6.31□□□□□ -1.4
PDLIM5-213ENST00000509357 X6R8D5 127 aa6.31□□□□□ -1.4
PDLIM5-213ENST00000509357 IGKV2-40A0A087WW87 121 aaPredicted RBP6.3□□□□□ -1.4
PDLIM5-213ENST00000509357 KANTRA0A1W2PQU2 76 aa6.3□□□□□ -1.4
PDLIM5-213ENST00000509357 GGTLC3B5MD39 225 aa6.3□□□□□ -1.4
PDLIM5-213ENST00000509357 C11orf94C9JXX5 98 aa6.3□□□□□ -1.4
PDLIM5-213ENST00000509357 IGKV2D-40P01614 121 aaPredicted RBP6.3□□□□□ -1.4
PDLIM5-213ENST00000509357 SEC11BP0C7V7 166 aa6.3□□□□□ -1.4
PDLIM5-213ENST00000509357 GCHFRP30047 84 aa6.3□□□□□ -1.4
PDLIM5-213ENST00000509357 UBE2L3P68036 154 aaKnown RBP6.3□□□□□ -1.4
PDLIM5-213ENST00000509357 CCL20P78556 96 aa6.3□□□□□ -1.4
PDLIM5-213ENST00000509357 ICAM4Q14773 271 aa6.3□□□□□ -1.4
PDLIM5-213ENST00000509357 KHDC3LQ587J8 217 aa6.3□□□□□ -1.4
PDLIM5-213ENST00000509357 PRR9Q5T870 116 aa6.3□□□□□ -1.4
PDLIM5-213ENST00000509357 ZNF767PQ75MW2 155 aa6.3□□□□□ -1.4
PDLIM5-213ENST00000509357 BAP18Q8IXM2 172 aa6.3□□□□□ -1.4
PDLIM5-213ENST00000509357 OR8A1Q8NGG7 326 aa6.3□□□□□ -1.4
PDLIM5-213ENST00000509357 RPUSD4Q96CM3 377 aaKnown RBP6.3□□□□□ -1.4
PDLIM5-213ENST00000509357 GNPNAT1Q96EK6 184 aaPredicted RBP6.3□□□□□ -1.4
PDLIM5-213ENST00000509357 FAM19A4Q96LR4 140 aa6.3□□□□□ -1.4
PDLIM5-213ENST00000509357 VGLL1Q99990 258 aa6.3□□□□□ -1.4
PDLIM5-213ENST00000509357 Q9H3A6 140 aa6.3□□□□□ -1.4
PDLIM5-213ENST00000509357 YTHDF2Q9Y5A9 579 aaKnown RBP6.3□□□□□ -1.4
PDLIM5-213ENST00000509357 TRAV10A0A0B4J240 114 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms