RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 ATP5G1P05496 136 aa7.66□□□□□ -1.18
RNF4-212ENST00000509258 ATP5G3P48201 142 aa7.66□□□□□ -1.18
RNF4-212ENST00000509258 CCL18P55774 89 aa7.66□□□□□ -1.18
RNF4-212ENST00000509258 ASAH1Q13510 395 aa7.66□□□□□ -1.18
RNF4-212ENST00000509258 PXDC1Q5TGL8 231 aa7.66□□□□□ -1.18
RNF4-212ENST00000509258 C10orf113Q5VZT2 155 aa7.66□□□□□ -1.18
RNF4-212ENST00000509258 LCN15Q6UWW0 184 aa7.66□□□□□ -1.18
RNF4-212ENST00000509258 C16orf74Q96GX8 76 aa7.66□□□□□ -1.18
RNF4-212ENST00000509258 LINC01587Q99440 93 aa7.66□□□□□ -1.18
RNF4-212ENST00000509258 LYRM2Q9NU23 88 aaPredicted RBP7.66□□□□□ -1.18
RNF4-212ENST00000509258 F5H768 121 aa7.65□□□□□ -1.18
RNF4-212ENST00000509258 CT45A10P0DMU9 189 aa7.65□□□□□ -1.18
RNF4-212ENST00000509258 DEFB130BP0DP73 79 aa7.65□□□□□ -1.18
RNF4-212ENST00000509258 DEFB130AP0DP74 79 aa7.65□□□□□ -1.18
RNF4-212ENST00000509258 CXCL2P19875 107 aa7.65□□□□□ -1.18
RNF4-212ENST00000509258 SULT1A1P50225 295 aa7.65□□□□□ -1.18
RNF4-212ENST00000509258 TAS2R60P59551 318 aa7.65□□□□□ -1.18
RNF4-212ENST00000509258 NHLH2Q02577 135 aa7.65□□□□□ -1.18
RNF4-212ENST00000509258 GFI1BQ5VTD9 330 aa7.65□□□□□ -1.18
RNF4-212ENST00000509258 DNAJC4Q9NNZ3 241 aa7.65□□□□□ -1.18
RNF4-212ENST00000509258 UQCC1Q9NVA1 299 aa7.65□□□□□ -1.18
RNF4-212ENST00000509258 OR5AC2Q9NZP5 309 aa7.65□□□□□ -1.18
RNF4-212ENST00000509258 CBY3A6NI87 242 aa7.64□□□□□ -1.19
RNF4-212ENST00000509258 J3KRW8 73 aa7.64□□□□□ -1.19
RNF4-212ENST00000509258 M0R3E3 92 aa7.64□□□□□ -1.19
RNF4-212ENST00000509258 UPK1BO75841 260 aa7.64□□□□□ -1.19
RNF4-212ENST00000509258 NDUFB4O95168 129 aa7.64□□□□□ -1.19
RNF4-212ENST00000509258 NUDT3O95989 172 aa7.64□□□□□ -1.19
RNF4-212ENST00000509258 PYYP10082 97 aa7.64□□□□□ -1.19
RNF4-212ENST00000509258 HTN1P15515 57 aa7.64□□□□□ -1.19
RNF4-212ENST00000509258 FGF7P21781 194 aa7.64□□□□□ -1.19
RNF4-212ENST00000509258 CDKN1BP46527 198 aa7.64□□□□□ -1.19
RNF4-212ENST00000509258 BAXQ07812 192 aa7.64□□□□□ -1.19
RNF4-212ENST00000509258 CLINT1Q14677 625 aa7.64□□□□□ -1.19
RNF4-212ENST00000509258 ZNF493Q6ZR52 646 aa7.64□□□□□ -1.19
RNF4-212ENST00000509258 BPIFA4PQ86YQ2 179 aa7.64□□□□□ -1.19
RNF4-212ENST00000509258 OR10J6PQ8NGY7 276 aa7.64□□□□□ -1.19
RNF4-212ENST00000509258 RNASE8Q8TDE3 154 aaKnown RBP7.64□□□□□ -1.19
RNF4-212ENST00000509258 C20orf144Q9BQM9 153 aa7.64□□□□□ -1.19
RNF4-212ENST00000509258 SLC50A1Q9BRV3 221 aa7.64□□□□□ -1.19
RNF4-212ENST00000509258 SLC39A9Q9NUM3 307 aa7.64□□□□□ -1.19
RNF4-212ENST00000509258 TIMM8BQ9Y5J9 83 aaPredicted RBP7.64□□□□□ -1.19
RNF4-212ENST00000509258 PXMP4Q9Y6I8 212 aa7.64□□□□□ -1.19
RNF4-212ENST00000509258 RPL29P47914 159 aaKnown RBP7.63□□□□□ -1.19
RNF4-212ENST00000509258 ERCC8Q13216 396 aa7.63□□□□□ -1.19
RNF4-212ENST00000509258 Q6ZQT7 251 aa7.63□□□□□ -1.19
RNF4-212ENST00000509258 CCDC28AQ8IWP9 274 aa7.63□□□□□ -1.19
RNF4-212ENST00000509258 FAM167A-AS1Q96KT0 104 aa7.63□□□□□ -1.19
RNF4-212ENST00000509258 GPN1Q9HCN4 374 aaPredicted RBP7.63□□□□□ -1.19
RNF4-212ENST00000509258 HSPG2P98160 4391 aa7.62□□□□□ -1.19
RNF4-212ENST00000509258 NBDYA0A0U1RRE5 68 aa7.62□□□□□ -1.19
RNF4-212ENST00000509258 C16orf90A8MZG2 172 aa7.62□□□□□ -1.19
RNF4-212ENST00000509258 NPIPB6E9PJ23 425 aa7.62□□□□□ -1.19
RNF4-212ENST00000509258 H7BYZ3 331 aa7.62□□□□□ -1.19
RNF4-212ENST00000509258 H2BFSP57053 126 aa7.62□□□□□ -1.19
RNF4-212ENST00000509258 LRRC37A5PQ49AS3 106 aa7.62□□□□□ -1.19
RNF4-212ENST00000509258 TTC32Q5I0X7 151 aa7.62□□□□□ -1.19
RNF4-212ENST00000509258 MZT2BQ6NZ67 158 aa7.62□□□□□ -1.19
RNF4-212ENST00000509258 LINC00299Q6ZSB3 139 aa7.62□□□□□ -1.19
RNF4-212ENST00000509258 C6orf223Q8N319 242 aa7.62□□□□□ -1.19
RNF4-212ENST00000509258 THAP6Q8TBB0 222 aa7.62□□□□□ -1.19
RNF4-212ENST00000509258 TMEM263Q8WUH6 116 aaKnown RBP7.62□□□□□ -1.19
RNF4-212ENST00000509258 CHAC2Q8WUX2 184 aa7.62□□□□□ -1.19
RNF4-212ENST00000509258 SLC25A2Q9BXI2 301 aa7.62□□□□□ -1.19
RNF4-212ENST00000509258 NPCDR1Q9BY65 106 aa7.62□□□□□ -1.19
RNF4-212ENST00000509258 KRTAP4-5Q9BYR2 181 aa7.62□□□□□ -1.19
RNF4-212ENST00000509258 NOP10Q9NPE3 64 aaKnown RBP7.62□□□□□ -1.19
RNF4-212ENST00000509258 TRBV19A0A075B6N1 114 aa7.61□□□□□ -1.19
RNF4-212ENST00000509258 TRAV12-3A0A0B4J271 114 aa7.61□□□□□ -1.19
RNF4-212ENST00000509258 EIF3GO75821 320 aaKnown RBP eCLIP7.61□□□□□ -1.19
RNF4-212ENST00000509258 CDK2AP2O75956 126 aa7.61□□□□□ -1.19
RNF4-212ENST00000509258 PVALBP20472 110 aaPredicted RBP7.61□□□□□ -1.19
RNF4-212ENST00000509258 S100A11P31949 105 aa7.61□□□□□ -1.19
RNF4-212ENST00000509258 TNP2Q05952 138 aa7.61□□□□□ -1.19
RNF4-212ENST00000509258 RAB31Q13636 194 aa7.61□□□□□ -1.19
RNF4-212ENST00000509258 PRR9Q5T870 116 aa7.61□□□□□ -1.19
RNF4-212ENST00000509258 Q6ZRG5 221 aa7.61□□□□□ -1.19
RNF4-212ENST00000509258 MIR17HGQ75NE6 70 aa7.61□□□□□ -1.19
RNF4-212ENST00000509258 EXOC3-AS1Q8N2X6 119 aa7.61□□□□□ -1.19
RNF4-212ENST00000509258 LINC00612Q8N6U2 182 aa7.61□□□□□ -1.19
RNF4-212ENST00000509258 OR5C1Q8NGR4 320 aa7.61□□□□□ -1.19
RNF4-212ENST00000509258 OR1L4Q8NGR5 311 aa7.61□□□□□ -1.19
RNF4-212ENST00000509258 ENKURQ8TC29 256 aa7.61□□□□□ -1.19
RNF4-212ENST00000509258 S100ZQ8WXG8 99 aa7.61□□□□□ -1.19
RNF4-212ENST00000509258 SNURFLB1AK76 121 aa7.6□□□□□ -1.19
RNF4-212ENST00000509258 HOXA5P20719 270 aa7.6□□□□□ -1.19
RNF4-212ENST00000509258 CD300CQ08708 224 aa7.6□□□□□ -1.19
RNF4-212ENST00000509258 STX12Q86Y82 276 aa7.6□□□□□ -1.19
RNF4-212ENST00000509258 ZNRF2Q8NHG8 242 aa7.6□□□□□ -1.19
RNF4-212ENST00000509258 BLNKQ8WV28 456 aa7.6□□□□□ -1.19
RNF4-212ENST00000509258 RNF141Q8WVD5 230 aa7.6□□□□□ -1.19
RNF4-212ENST00000509258 FAM19A4Q96LR4 140 aa7.6□□□□□ -1.19
RNF4-212ENST00000509258 PFDN5Q99471 154 aa7.6□□□□□ -1.19
RNF4-212ENST00000509258 AGPAT4-IT1Q9H0P7 198 aa7.6□□□□□ -1.19
RNF4-212ENST00000509258 TMEM14CQ9P0S9 112 aa7.6□□□□□ -1.19
RNF4-212ENST00000509258 LRP1BQ9NZR2 4599 aa7.59□□□□□ -1.19
RNF4-212ENST00000509258 IGKV2-40A0A087WW87 121 aaPredicted RBP7.59□□□□□ -1.19
RNF4-212ENST00000509258 INMT-MINDY4F8WBC2 141 aa7.59□□□□□ -1.19
RNF4-212ENST00000509258 IGKV2D-40P01614 121 aaPredicted RBP7.59□□□□□ -1.19
RNF4-212ENST00000509258 RLN2P04090 185 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms