RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 PRB2P02812 416 aaPredicted RBP7.07□□□□□ -1.28
TPM3-218ENST00000505010 CNN1P51911 297 aaKnown RBP7.07□□□□□ -1.28
TPM3-218ENST00000505010 GUCA2BQ16661 112 aa7.07□□□□□ -1.28
TPM3-218ENST00000505010 C10orf91Q5T1B1 145 aa7.07□□□□□ -1.28
TPM3-218ENST00000505010 IGFL4Q6B9Z1 124 aa7.07□□□□□ -1.28
TPM3-218ENST00000505010 LYPD1Q8N2G4 141 aa7.07□□□□□ -1.28
TPM3-218ENST00000505010 C16orf92Q96LL3 132 aa7.07□□□□□ -1.28
TPM3-218ENST00000505010 DERL1Q9BUN8 251 aa7.07□□□□□ -1.28
TPM3-218ENST00000505010 MLXQ9UH92 298 aa7.07□□□□□ -1.28
TPM3-218ENST00000505010 G3V4G9 280 aa7.06□□□□□ -1.28
TPM3-218ENST00000505010 M0R3E3 92 aa7.06□□□□□ -1.28
TPM3-218ENST00000505010 PF4P02776 101 aa7.06□□□□□ -1.28
TPM3-218ENST00000505010 TCRAP04437 139 aa7.06□□□□□ -1.28
TPM3-218ENST00000505010 CSN3P07498 182 aa7.06□□□□□ -1.28
TPM3-218ENST00000505010 PRB4P10163 310 aaPredicted RBP7.06□□□□□ -1.28
TPM3-218ENST00000505010 HLA-DMBP28068 263 aa7.06□□□□□ -1.28
TPM3-218ENST00000505010 RPL35P42766 123 aaKnown RBP7.06□□□□□ -1.28
TPM3-218ENST00000505010 CSN1S1P47710 185 aa7.06□□□□□ -1.28
TPM3-218ENST00000505010 FAM74A3Q4VXF1 159 aa7.06□□□□□ -1.28
TPM3-218ENST00000505010 ADAMTSL5Q6ZMM2 481 aa7.06□□□□□ -1.28
TPM3-218ENST00000505010 SVBPQ8N300 66 aa7.06□□□□□ -1.28
TPM3-218ENST00000505010 GBGT1Q8N5D6 347 aa7.06□□□□□ -1.28
TPM3-218ENST00000505010 RNF182Q8N6D2 247 aa7.06□□□□□ -1.28
TPM3-218ENST00000505010 MRAPQ8TCY5 172 aa7.06□□□□□ -1.28
TPM3-218ENST00000505010 C2CD4CQ8TF44 421 aa7.06□□□□□ -1.28
TPM3-218ENST00000505010 HIST1H2BAQ96A08 127 aa7.06□□□□□ -1.28
TPM3-218ENST00000505010 NIPSNAP3BQ9BS92 247 aa7.06□□□□□ -1.28
TPM3-218ENST00000505010 ATG101Q9BSB4 218 aa7.06□□□□□ -1.28
TPM3-218ENST00000505010 NRN1Q9NPD7 142 aa7.06□□□□□ -1.28
TPM3-218ENST00000505010 ZNF331Q9NQX6 463 aaPredicted RBP7.06□□□□□ -1.28
TPM3-218ENST00000505010 EPDR1Q9UM22 224 aa7.06□□□□□ -1.28
TPM3-218ENST00000505010 TRAV8-2A0A0B4J237 113 aa7.05□□□□□ -1.28
TPM3-218ENST00000505010 M0R036 132 aa7.05□□□□□ -1.28
TPM3-218ENST00000505010 TFPI2P48307 235 aa7.05□□□□□ -1.28
TPM3-218ENST00000505010 UBE2G1P62253 170 aa7.05□□□□□ -1.28
TPM3-218ENST00000505010 CENPWQ5EE01 88 aa7.05□□□□□ -1.28
TPM3-218ENST00000505010 KPRPQ5T749 579 aaPredicted RBP7.05□□□□□ -1.28
TPM3-218ENST00000505010 GOLT1AQ6ZVE7 132 aa7.05□□□□□ -1.28
TPM3-218ENST00000505010 WFDC3Q8IUB2 231 aa7.05□□□□□ -1.28
TPM3-218ENST00000505010 TVP23CQ96ET8 276 aa7.05□□□□□ -1.28
TPM3-218ENST00000505010 NAT8Q9UHE5 227 aa7.05□□□□□ -1.28
TPM3-218ENST00000505010 PRELID1Q9Y255 219 aa7.05□□□□□ -1.28
TPM3-218ENST00000505010 EPPK1P58107 5090 aaKnown RBP7.04□□□□□ -1.28
TPM3-218ENST00000505010 IGKV2-40A0A087WW87 121 aaPredicted RBP7.04□□□□□ -1.28
TPM3-218ENST00000505010 TRAV34A0A0B4J273 112 aa7.04□□□□□ -1.28
TPM3-218ENST00000505010 DIRC3C9JPN6 131 aa7.04□□□□□ -1.28
TPM3-218ENST00000505010 K7EQM0 130 aa7.04□□□□□ -1.28
TPM3-218ENST00000505010 DNASE2O00115 360 aaPredicted RBP7.04□□□□□ -1.28
TPM3-218ENST00000505010 SOCS3O14543 225 aa7.04□□□□□ -1.28
TPM3-218ENST00000505010 SNAPINO95295 136 aa7.04□□□□□ -1.28
TPM3-218ENST00000505010 IGKV2D-40P01614 121 aaPredicted RBP7.04□□□□□ -1.28
TPM3-218ENST00000505010 GNG4P50150 75 aa7.04□□□□□ -1.28
TPM3-218ENST00000505010 ADIRFQ15847 76 aa7.04□□□□□ -1.28
TPM3-218ENST00000505010 TMEM241Q24JQ0 296 aa7.04□□□□□ -1.28
TPM3-218ENST00000505010 SAMD13Q5VXD3 122 aa7.04□□□□□ -1.28
TPM3-218ENST00000505010 ZNF738Q8NE65 137 aa7.04□□□□□ -1.28
TPM3-218ENST00000505010 SGK494Q96LW2 274 aa7.04□□□□□ -1.28
TPM3-218ENST00000505010 LINC00479Q96M42 142 aa7.04□□□□□ -1.28
TPM3-218ENST00000505010 MS4A6AQ9H2W1 248 aa7.04□□□□□ -1.28
TPM3-218ENST00000505010 TENM3Q9P273 2699 aa7.03□□□□□ -1.28
TPM3-218ENST00000505010 BIRC6Q9NR09 4857 aa7.03□□□□□ -1.28
TPM3-218ENST00000505010 TRAV8-1A0A0A6YYK1 113 aa7.03□□□□□ -1.28
TPM3-218ENST00000505010 PGPEP1LA6NFU8 196 aa7.03□□□□□ -1.28
TPM3-218ENST00000505010 ZNF705FA8MVS1 300 aaPredicted RBP7.03□□□□□ -1.28
TPM3-218ENST00000505010 C9JCJ5 164 aa7.03□□□□□ -1.28
TPM3-218ENST00000505010 ISLRO14498 428 aa7.03□□□□□ -1.28
TPM3-218ENST00000505010 SAP30O75446 220 aa7.03□□□□□ -1.28
TPM3-218ENST00000505010 S100A9P06702 114 aaKnown RBP7.03□□□□□ -1.28
TPM3-218ENST00000505010 ID1P41134 155 aa7.03□□□□□ -1.28
TPM3-218ENST00000505010 PSG3Q16557 428 aa7.03□□□□□ -1.28
TPM3-218ENST00000505010 TMEM183BQ1AE95 376 aa7.03□□□□□ -1.28
TPM3-218ENST00000505010 SAMD5Q5TGI4 173 aa7.03□□□□□ -1.28
TPM3-218ENST00000505010 LCN12Q6JVE5 192 aa7.03□□□□□ -1.28
TPM3-218ENST00000505010 RBPMS2Q6ZRY4 209 aaKnown RBP7.03□□□□□ -1.28
TPM3-218ENST00000505010 Q86TA4 180 aa7.03□□□□□ -1.28
TPM3-218ENST00000505010 TMEM61Q8N0U2 210 aa7.03□□□□□ -1.28
TPM3-218ENST00000505010 LINC00482Q8N8I6 264 aa7.03□□□□□ -1.28
TPM3-218ENST00000505010 NHLRC2Q8NBF2 726 aa7.03□□□□□ -1.28
TPM3-218ENST00000505010 CLRN3Q8NCR9 226 aa7.03□□□□□ -1.28
TPM3-218ENST00000505010 MRPL53Q96EL3 112 aaKnown RBP7.03□□□□□ -1.28
TPM3-218ENST00000505010 FMC1Q96HJ9 113 aa7.03□□□□□ -1.28
TPM3-218ENST00000505010 C20orf173Q96LM9 149 aa7.03□□□□□ -1.28
TPM3-218ENST00000505010 IGF2BP2-AS1Q96M15 143 aa7.03□□□□□ -1.28
TPM3-218ENST00000505010 AURKAIP1Q9NWT8 199 aaPredicted RBP7.03□□□□□ -1.28
TPM3-218ENST00000505010 CLEC5AQ9NY25 188 aa7.03□□□□□ -1.28
TPM3-218ENST00000505010 DNAH9Q9NYC9 4486 aa7.03□□□□□ -1.28
TPM3-218ENST00000505010 TRBV20OR9-2A0A075B6H5 130 aa7.02□□□□□ -1.29
TPM3-218ENST00000505010 SERTM2A0A1B0GWG4 89 aa7.02□□□□□ -1.29
TPM3-218ENST00000505010 PRAC2D3DTV9 90 aa7.02□□□□□ -1.29
TPM3-218ENST00000505010 TSPAN4O14817 238 aa7.02□□□□□ -1.29
TPM3-218ENST00000505010 TAS2R60P59551 318 aa7.02□□□□□ -1.29
TPM3-218ENST00000505010 RPL23P62829 140 aaKnown RBP7.02□□□□□ -1.29
TPM3-218ENST00000505010 PAFAH1B2P68402 229 aa7.02□□□□□ -1.29
TPM3-218ENST00000505010 FLI1Q01543 452 aaPredicted RBP7.02□□□□□ -1.29
TPM3-218ENST00000505010 PNRC1Q12796 327 aaPredicted RBP7.02□□□□□ -1.29
TPM3-218ENST00000505010 DEFB114Q30KQ6 69 aa7.02□□□□□ -1.29
TPM3-218ENST00000505010 CD300EQ496F6 205 aaPredicted RBP7.02□□□□□ -1.29
TPM3-218ENST00000505010 ATRAIDQ6UW56 229 aa7.02□□□□□ -1.29
TPM3-218ENST00000505010 PRNTQ86SH4 94 aa7.02□□□□□ -1.29
TPM3-218ENST00000505010 FAM24BQ8N5W8 94 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 181.9 ms