RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 A0A1B0GUT8 65 aa4.96□□□□□ -1.62
CLCN3-204ENST00000504131 ADARB2-AS1A8MUL3 147 aa4.96□□□□□ -1.62
CLCN3-204ENST00000504131 CFC1BP0CG36 223 aa4.96□□□□□ -1.62
CLCN3-204ENST00000504131 CFC1P0CG37 223 aa4.96□□□□□ -1.62
CLCN3-204ENST00000504131 TRAV40A0A0B4J280 105 aa4.95□□□□□ -1.62
CLCN3-204ENST00000504131 SNRNP200O75643 2136 aaKnown RBP4.95□□□□□ -1.62
CLCN3-204ENST00000504131 RPL34P49207 117 aaKnown RBP4.95□□□□□ -1.62
CLCN3-204ENST00000504131 COX8CQ7Z4L0 72 aa4.95□□□□□ -1.62
CLCN3-204ENST00000504131 LHFPL1Q86WI0 220 aa4.95□□□□□ -1.62
CLCN3-204ENST00000504131 OVOL2Q9BRP0 275 aa4.95□□□□□ -1.62
CLCN3-204ENST00000504131 ZNF581Q9P0T4 197 aa4.95□□□□□ -1.62
CLCN3-204ENST00000504131 RNF114Q9Y508 228 aa4.95□□□□□ -1.62
CLCN3-204ENST00000504131 SNURFQ9Y675 71 aa4.95□□□□□ -1.62
CLCN3-204ENST00000504131 GP1BBP13224 206 aa4.95□□□□□ -1.62
CLCN3-204ENST00000504131 SPINK9Q5DT21 86 aa4.95□□□□□ -1.62
CLCN3-204ENST00000504131 FAM19A3Q7Z5A8 133 aa4.95□□□□□ -1.62
CLCN3-204ENST00000504131 SRSF12Q8WXF0 261 aaKnown RBP4.95□□□□□ -1.62
CLCN3-204ENST00000504131 K7EMT4 169 aa4.95□□□□□ -1.62
CLCN3-204ENST00000504131 NXPH4O95158 308 aa4.95□□□□□ -1.62
CLCN3-204ENST00000504131 WISP3O95389 354 aaPredicted RBP4.95□□□□□ -1.62
CLCN3-204ENST00000504131 NNATQ16517 81 aa4.95□□□□□ -1.62
CLCN3-204ENST00000504131 LCA10Q71F78 164 aa4.95□□□□□ -1.62
CLCN3-204ENST00000504131 MARCH3Q86UD3 253 aa4.95□□□□□ -1.62
CLCN3-204ENST00000504131 CD177Q8N6Q3 437 aa4.95□□□□□ -1.62
CLCN3-204ENST00000504131 ZNF689Q96CS4 500 aaPredicted RBP4.95□□□□□ -1.62
CLCN3-204ENST00000504131 PIKFYVEQ9Y2I7 2098 aa4.95□□□□□ -1.62
CLCN3-204ENST00000504131 NANOS3P60323 173 aaKnown RBP4.95□□□□□ -1.62
CLCN3-204ENST00000504131 C6orf99Q4VX62 202 aa4.95□□□□□ -1.62
CLCN3-204ENST00000504131 SP7Q8TDD2 431 aaPredicted RBP4.95□□□□□ -1.62
CLCN3-204ENST00000504131 CLDN14O95500 239 aa4.94□□□□□ -1.62
CLCN3-204ENST00000504131 IL9P15248 144 aa4.94□□□□□ -1.62
CLCN3-204ENST00000504131 PRNTQ86SH4 94 aa4.94□□□□□ -1.62
CLCN3-204ENST00000504131 PAQR4Q8N4S7 273 aaPredicted RBP4.94□□□□□ -1.62
CLCN3-204ENST00000504131 A0A1B0GTH9 108 aa4.94□□□□□ -1.62
CLCN3-204ENST00000504131 MRPS12O15235 138 aaKnown RBP4.94□□□□□ -1.62
CLCN3-204ENST00000504131 HAMPP81172 84 aa4.94□□□□□ -1.62
CLCN3-204ENST00000504131 NFE4Q86UQ8 179 aa4.94□□□□□ -1.62
CLCN3-204ENST00000504131 KLF16Q9BXK1 252 aaPredicted RBP4.94□□□□□ -1.62
CLCN3-204ENST00000504131 ARRDC1-AS1Q9H2J1 176 aa4.94□□□□□ -1.62
CLCN3-204ENST00000504131 MTCL1Q9Y4B5 1905 aaKnown RBP4.94□□□□□ -1.62
CLCN3-204ENST00000504131 C9JCJ5 164 aa4.94□□□□□ -1.62
CLCN3-204ENST00000504131 IGKV1D-16P01601 117 aa4.94□□□□□ -1.62
CLCN3-204ENST00000504131 TRAV13-2A0A0B4J235 113 aa4.94□□□□□ -1.62
CLCN3-204ENST00000504131 IGHV1-69DA0A0B4J2H0 117 aa4.94□□□□□ -1.62
CLCN3-204ENST00000504131 TMEM52BQ4KMG9 183 aa4.94□□□□□ -1.62
CLCN3-204ENST00000504131 LY96Q9Y6Y9 160 aa4.94□□□□□ -1.62
CLCN3-204ENST00000504131 DOCK1Q14185 1865 aa4.94□□□□□ -1.62
CLCN3-204ENST00000504131 SPANXN1Q5VSR9 72 aa4.94□□□□□ -1.62
CLCN3-204ENST00000504131 A0A0G2JMZ2 1700 aa4.93□□□□□ -1.62
CLCN3-204ENST00000504131 FOLR3P41439 243 aa4.93□□□□□ -1.62
CLCN3-204ENST00000504131 SSC5DA1L4H1 1573 aa4.93□□□□□ -1.62
CLCN3-204ENST00000504131 PTPRZ1P23471 2315 aaPredicted RBP4.93□□□□□ -1.62
CLCN3-204ENST00000504131 WISP1O95388 367 aa4.93□□□□□ -1.62
CLCN3-204ENST00000504131 MYCNOSP40205 109 aa4.93□□□□□ -1.62
CLCN3-204ENST00000504131 PRB3Q04118 309 aaPredicted RBP4.93□□□□□ -1.62
CLCN3-204ENST00000504131 LINC00173Q6ZV60 143 aa4.93□□□□□ -1.62
CLCN3-204ENST00000504131 MORN4Q8NDC4 146 aa4.93□□□□□ -1.62
CLCN3-204ENST00000504131 TMEM52Q8NDY8 209 aa4.93□□□□□ -1.62
CLCN3-204ENST00000504131 CCL1P22362 96 aa4.93□□□□□ -1.62
CLCN3-204ENST00000504131 RPS27P42677 84 aaKnown RBP4.93□□□□□ -1.62
CLCN3-204ENST00000504131 SCXQ7RTU7 201 aa4.93□□□□□ -1.62
CLCN3-204ENST00000504131 DEFB127Q9H1M4 99 aa4.93□□□□□ -1.62
CLCN3-204ENST00000504131 RNF7Q9UBF6 113 aa4.93□□□□□ -1.62
CLCN3-204ENST00000504131 R4GMQ9 66 aa4.93□□□□□ -1.62
CLCN3-204ENST00000504131 HOXA4Q00056 320 aaPredicted RBP4.93□□□□□ -1.62
CLCN3-204ENST00000504131 PRR15Q8IV56 129 aa4.93□□□□□ -1.62
CLCN3-204ENST00000504131 DCANP1Q8TF63 244 aa4.93□□□□□ -1.62
CLCN3-204ENST00000504131 C17orf77Q96MU5 243 aa4.93□□□□□ -1.62
CLCN3-204ENST00000504131 WI2-2373I1.2A0A1W2PRP0 233 aa4.92□□□□□ -1.62
CLCN3-204ENST00000504131 PPYP01298 95 aa4.92□□□□□ -1.62
CLCN3-204ENST00000504131 ZFP2Q6ZN57 461 aa4.92□□□□□ -1.62
CLCN3-204ENST00000504131 C2orf91Q6ZV80 131 aa4.92□□□□□ -1.62
CLCN3-204ENST00000504131 SPACA3Q8IXA5 215 aa4.92□□□□□ -1.62
CLCN3-204ENST00000504131 DYNAPQ8N1N2 210 aa4.92□□□□□ -1.62
CLCN3-204ENST00000504131 PRR25Q96S07 402 aa4.92□□□□□ -1.62
CLCN3-204ENST00000504131 CASP8AP2Q9UKL3 1982 aa4.92□□□□□ -1.62
CLCN3-204ENST00000504131 PLXND1Q9Y4D7 1925 aa4.92□□□□□ -1.62
CLCN3-204ENST00000504131 SCRG1O75711 98 aa4.92□□□□□ -1.62
CLCN3-204ENST00000504131 HILS1P60008 231 aa4.92□□□□□ -1.62
CLCN3-204ENST00000504131 FAM223AQ8IWN6 122 aa4.92□□□□□ -1.62
CLCN3-204ENST00000504131 NRACQ8N912 160 aa4.92□□□□□ -1.62
CLCN3-204ENST00000504131 C8orf49Q96NF6 230 aa4.92□□□□□ -1.62
CLCN3-204ENST00000504131 FAM60AQ9NP50 221 aa4.92□□□□□ -1.62
CLCN3-204ENST00000504131 PHLDA3Q9Y5J5 127 aa4.92□□□□□ -1.62
CLCN3-204ENST00000504131 BSPH1Q075Z2 132 aa4.92□□□□□ -1.62
CLCN3-204ENST00000504131 RUSC1-AS1Q66K80 236 aa4.92□□□□□ -1.62
CLCN3-204ENST00000504131 TEPPQ6URK8 271 aa4.92□□□□□ -1.62
CLCN3-204ENST00000504131 ZNF525Q8N782 197 aa4.92□□□□□ -1.62
CLCN3-204ENST00000504131 DCTN5Q9BTE1 182 aa4.92□□□□□ -1.62
CLCN3-204ENST00000504131 ZNF747Q9BV97 191 aa4.92□□□□□ -1.62
CLCN3-204ENST00000504131 NDUFS7O75251 213 aa4.92□□□□□ -1.62
CLCN3-204ENST00000504131 DSCR4P56555 118 aaPredicted RBP4.92□□□□□ -1.62
CLCN3-204ENST00000504131 ERCC8Q13216 396 aa4.92□□□□□ -1.62
CLCN3-204ENST00000504131 C19orf54Q5BKX5 351 aa4.92□□□□□ -1.62
CLCN3-204ENST00000504131 TMEM158Q8WZ71 300 aa4.92□□□□□ -1.62
CLCN3-204ENST00000504131 NUMA1Q14980 2115 aa4.92□□□□□ -1.62
CLCN3-204ENST00000504131 TRBV7-7A0A0K0K1E9 115 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 LTAP01374 205 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 BAALC-AS2P0C853 105 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 IGFBP6P24592 240 aaPredicted RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms