RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	C3orf56	Q8N813	242 aa		9.12	□□□□□ -0.95
MATR3-231	ENST00000502394	CYB561D1	Q8N8Q1	229 aa		9.12	□□□□□ -0.95
MATR3-231	ENST00000502394	WFDC9	Q8NEX5	89 aa		9.12	□□□□□ -0.95
MATR3-231	ENST00000502394	MRPL53	Q96EL3	112 aa	Known RBP	9.12	□□□□□ -0.95
MATR3-231	ENST00000502394	MS4A6A	Q9H2W1	248 aa		9.12	□□□□□ -0.95
MATR3-231	ENST00000502394	CLEC5A	Q9NY25	188 aa		9.12	□□□□□ -0.95
MATR3-231	ENST00000502394	EPDR1	Q9UM22	224 aa		9.12	□□□□□ -0.95
MATR3-231	ENST00000502394	PRELID1	Q9Y255	219 aa		9.12	□□□□□ -0.95
MATR3-231	ENST00000502394	SELENOK	Q9Y6D0	94 aa		9.12	□□□□□ -0.95
MATR3-231	ENST00000502394		M0R3E3	92 aa		9.11	□□□□□ -0.95
MATR3-231	ENST00000502394	IGLV1-51	P01701	117 aa		9.11	□□□□□ -0.95
MATR3-231	ENST00000502394	SLC25A5	P05141	298 aa	Known RBP	9.11	□□□□□ -0.95
MATR3-231	ENST00000502394	SFTA3	P0C7M3	94 aa		9.11	□□□□□ -0.95
MATR3-231	ENST00000502394	CD300E	Q496F6	205 aa	Predicted RBP	9.11	□□□□□ -0.95
MATR3-231	ENST00000502394	C10orf91	Q5T1B1	145 aa		9.11	□□□□□ -0.95
MATR3-231	ENST00000502394	SAMD13	Q5VXD3	122 aa		9.11	□□□□□ -0.95
MATR3-231	ENST00000502394	IGFL4	Q6B9Z1	124 aa		9.11	□□□□□ -0.95
MATR3-231	ENST00000502394	DYNLRB2	Q8TF09	96 aa		9.11	□□□□□ -0.95
MATR3-231	ENST00000502394	HIST1H2BA	Q96A08	127 aa		9.11	□□□□□ -0.95
MATR3-231	ENST00000502394	C20orf173	Q96LM9	149 aa		9.11	□□□□□ -0.95
MATR3-231	ENST00000502394	COL6A5	A8TX70	2615 aa		9.1	□□□□□ -0.95
MATR3-231	ENST00000502394	PEX7	O00628	323 aa		9.1	□□□□□ -0.95
MATR3-231	ENST00000502394	ISLR	O14498	428 aa		9.1	□□□□□ -0.95
MATR3-231	ENST00000502394	ATP6V1G1	O75348	118 aa		9.1	□□□□□ -0.95
MATR3-231	ENST00000502394	TCRA	P04437	139 aa		9.1	□□□□□ -0.95
MATR3-231	ENST00000502394	GNG5	P63218	68 aa		9.1	□□□□□ -0.95
MATR3-231	ENST00000502394	OR2K2	Q8NGT1	345 aa		9.1	□□□□□ -0.95
MATR3-231	ENST00000502394	C16orf92	Q96LL3	132 aa		9.1	□□□□□ -0.95
MATR3-231	ENST00000502394	LINC00052	Q96N35	136 aa		9.1	□□□□□ -0.95
MATR3-231	ENST00000502394	AAMDC	Q9H7C9	122 aa		9.1	□□□□□ -0.95
MATR3-231	ENST00000502394	STAB1	Q9NY15	2570 aa		9.09	□□□□□ -0.95
MATR3-231	ENST00000502394	IGKV3-7	A0A075B6H7	116 aa		9.09	□□□□□ -0.95
MATR3-231	ENST00000502394	IZUMO1R	A6ND01	250 aa		9.09	□□□□□ -0.95
MATR3-231	ENST00000502394	DIRC3	C9JPN6	131 aa		9.09	□□□□□ -0.95
MATR3-231	ENST00000502394	SAP30	O75446	220 aa		9.09	□□□□□ -0.95
MATR3-231	ENST00000502394	PSG3	Q16557	428 aa		9.09	□□□□□ -0.95
MATR3-231	ENST00000502394	GBGT1	Q8N5D6	347 aa		9.09	□□□□□ -0.95
MATR3-231	ENST00000502394	FAM24B	Q8N5W8	94 aa		9.09	□□□□□ -0.95
MATR3-231	ENST00000502394	RNF182	Q8N6D2	247 aa		9.09	□□□□□ -0.95
MATR3-231	ENST00000502394	RPUSD4	Q96CM3	377 aa	Known RBP	9.09	□□□□□ -0.95
MATR3-231	ENST00000502394	ATG101	Q9BSB4	218 aa		9.09	□□□□□ -0.95
MATR3-231	ENST00000502394	DERL1	Q9BUN8	251 aa		9.09	□□□□□ -0.95
MATR3-231	ENST00000502394	SEC11C	Q9BY50	192 aa		9.09	□□□□□ -0.95
MATR3-231	ENST00000502394	PARL	Q9H300	379 aa		9.09	□□□□□ -0.95
MATR3-231	ENST00000502394	ZNF256	Q9Y2P7	627 aa	Predicted RBP	9.09	□□□□□ -0.95
MATR3-231	ENST00000502394	CARHSP1	Q9Y2V2	147 aa	Known RBP	9.09	□□□□□ -0.95
MATR3-231	ENST00000502394	KLF12	Q9Y4X4	402 aa		9.09	□□□□□ -0.95
MATR3-231	ENST00000502394	TRBV6-1	A0A0K0K1D8	114 aa		9.08	□□□□□ -0.96
MATR3-231	ENST00000502394	SERTM2	A0A1B0GWG4	89 aa		9.08	□□□□□ -0.96
MATR3-231	ENST00000502394	KRBOX1	C9JBD0	128 aa		9.08	□□□□□ -0.96
MATR3-231	ENST00000502394	PRAC2	D3DTV9	90 aa		9.08	□□□□□ -0.96
MATR3-231	ENST00000502394	IGLV2-11	P01706	119 aa		9.08	□□□□□ -0.96
MATR3-231	ENST00000502394	RPL11	P62913	178 aa	Known RBP	9.08	□□□□□ -0.96
MATR3-231	ENST00000502394	LCN12	Q6JVE5	192 aa		9.08	□□□□□ -0.96
MATR3-231	ENST00000502394	SPAG8	Q99932	426 aa	Predicted RBP	9.08	□□□□□ -0.96
MATR3-231	ENST00000502394	VWF	P04275	2813 aa		9.07	□□□□□ -0.96
MATR3-231	ENST00000502394	TRBV20OR9-2	A0A075B6H5	130 aa		9.07	□□□□□ -0.96
MATR3-231	ENST00000502394	RBAKDN	A6NC62	111 aa		9.07	□□□□□ -0.96
MATR3-231	ENST00000502394	ZNF705F	A8MVS1	300 aa	Predicted RBP	9.07	□□□□□ -0.96
MATR3-231	ENST00000502394	DNASE2	O00115	360 aa	Predicted RBP	9.07	□□□□□ -0.96
MATR3-231	ENST00000502394	ID1	P41134	155 aa		9.07	□□□□□ -0.96
MATR3-231	ENST00000502394	AKR1C3	P42330	323 aa		9.07	□□□□□ -0.96
MATR3-231	ENST00000502394	RPL35	P42766	123 aa	Known RBP	9.07	□□□□□ -0.96
MATR3-231	ENST00000502394	INSL3	P51460	131 aa		9.07	□□□□□ -0.96
MATR3-231	ENST00000502394	TAS2R60	P59551	318 aa		9.07	□□□□□ -0.96
MATR3-231	ENST00000502394	PAFAH1B2	P68402	229 aa		9.07	□□□□□ -0.96
MATR3-231	ENST00000502394	SOHLH1	Q5JUK2	328 aa		9.07	□□□□□ -0.96
MATR3-231	ENST00000502394	C9orf66	Q5T8R8	295 aa		9.07	□□□□□ -0.96
MATR3-231	ENST00000502394	RBPMS2	Q6ZRY4	209 aa	Known RBP	9.07	□□□□□ -0.96
MATR3-231	ENST00000502394	GOLT1A	Q6ZVE7	132 aa		9.07	□□□□□ -0.96
MATR3-231	ENST00000502394	TMEM75	Q8N9X5	138 aa		9.07	□□□□□ -0.96
MATR3-231	ENST00000502394	CMTM2	Q8TAZ6	248 aa		9.07	□□□□□ -0.96
MATR3-231	ENST00000502394	IGF2BP2-AS1	Q96M15	143 aa		9.07	□□□□□ -0.96
MATR3-231	ENST00000502394	LINC00479	Q96M42	142 aa		9.07	□□□□□ -0.96
MATR3-231	ENST00000502394		C9JCJ5	164 aa		9.06	□□□□□ -0.96
MATR3-231	ENST00000502394		F8W036	122 aa		9.06	□□□□□ -0.96
MATR3-231	ENST00000502394	CSN1S1	P47710	185 aa		9.06	□□□□□ -0.96
MATR3-231	ENST00000502394	TFPI2	P48307	235 aa		9.06	□□□□□ -0.96
MATR3-231	ENST00000502394	CNN1	P51911	297 aa	Known RBP	9.06	□□□□□ -0.96
MATR3-231	ENST00000502394	TMEM183B	Q1AE95	376 aa		9.06	□□□□□ -0.96
MATR3-231	ENST00000502394	FAM74A3	Q4VXF1	159 aa		9.06	□□□□□ -0.96
MATR3-231	ENST00000502394	WFDC3	Q8IUB2	231 aa		9.06	□□□□□ -0.96
MATR3-231	ENST00000502394	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	9.05	□□□□□ -0.96
MATR3-231	ENST00000502394	TRAV34	A0A0B4J273	112 aa		9.05	□□□□□ -0.96
MATR3-231	ENST00000502394	OR4C46	A6NHA9	309 aa		9.05	□□□□□ -0.96
MATR3-231	ENST00000502394	ZNF727	A8MUV8	499 aa		9.05	□□□□□ -0.96
MATR3-231	ENST00000502394	IGKV2D-40	P01614	121 aa	Predicted RBP	9.05	□□□□□ -0.96
MATR3-231	ENST00000502394	IGLV2-8	P01709	118 aa		9.05	□□□□□ -0.96
MATR3-231	ENST00000502394	S100A9	P06702	114 aa	Known RBP	9.05	□□□□□ -0.96
MATR3-231	ENST00000502394	ZNF688	P0C7X2	276 aa		9.05	□□□□□ -0.96
MATR3-231	ENST00000502394	PRB4	P10163	310 aa	Predicted RBP	9.05	□□□□□ -0.96
MATR3-231	ENST00000502394	CEBPG	P53567	150 aa		9.05	□□□□□ -0.96
MATR3-231	ENST00000502394	RIPPLY3	P57055	190 aa		9.05	□□□□□ -0.96
MATR3-231	ENST00000502394	BEAN1	Q3B7T3	259 aa		9.05	□□□□□ -0.96
MATR3-231	ENST00000502394	FMC1	Q96HJ9	113 aa		9.05	□□□□□ -0.96
MATR3-231	ENST00000502394	SMIM7	Q9BQ49	75 aa		9.05	□□□□□ -0.96
MATR3-231	ENST00000502394	MCRIP2	Q9BUT9	160 aa	Known RBP	9.05	□□□□□ -0.96
MATR3-231	ENST00000502394	PPP1R14D	Q9NXH3	145 aa		9.05	□□□□□ -0.96
MATR3-231	ENST00000502394	RPH3AL	Q9UNE2	315 aa		9.05	□□□□□ -0.96
MATR3-231	ENST00000502394	TRAV8-1	A0A0A6YYK1	113 aa		9.04	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms