RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 LYPD1Q8N2G4 141 aa14.83□□□□□ -0.04
CTSD-206ENST00000497544 CITED4Q96RK1 184 aa14.83□□□□□ -0.04
CTSD-206ENST00000497544 PRELID1Q9Y255 219 aa14.83□□□□□ -0.04
CTSD-206ENST00000497544 KNCNA6PVL3 124 aa14.82□□□□□ -0.04
CTSD-206ENST00000497544 A8MZ25 164 aa14.82□□□□□ -0.04
CTSD-206ENST00000497544 ICAM4Q14773 271 aa14.82□□□□□ -0.04
CTSD-206ENST00000497544 ACTL10Q5JWF8 245 aa14.82□□□□□ -0.04
CTSD-206ENST00000497544 STHQ8IWL8 128 aa14.82□□□□□ -0.04
CTSD-206ENST00000497544 EXOC3-AS1Q8N2X6 119 aa14.82□□□□□ -0.04
CTSD-206ENST00000497544 FOXI2Q6ZQN5 318 aa14.81□□□□□ -0.04
CTSD-206ENST00000497544 RPUSD4Q96CM3 377 aaKnown RBP14.81□□□□□ -0.04
CTSD-206ENST00000497544 Q9H3A6 140 aa14.81□□□□□ -0.04
CTSD-206ENST00000497544 TMPRSS5Q9H3S3 457 aa14.81□□□□□ -0.04
CTSD-206ENST00000497544 LOC102724200A0A096LPH7 203 aaPredicted RBP14.8□□□□□ -0.04
CTSD-206ENST00000497544 A0A1B0GV50 99 aa14.8□□□□□ -0.04
CTSD-206ENST00000497544 ZNF705EA8MWA4 302 aaPredicted RBP14.8□□□□□ -0.04
CTSD-206ENST00000497544 TEX46H3BTG2 121 aa14.8□□□□□ -0.04
CTSD-206ENST00000497544 DEFB1P60022 68 aa14.8□□□□□ -0.04
CTSD-206ENST00000497544 SUN5Q8TC36 379 aa14.8□□□□□ -0.04
CTSD-206ENST00000497544 SAV1Q9H4B6 383 aaPredicted RBP14.8□□□□□ -0.04
CTSD-206ENST00000497544 RBMY1BA6NDE4 496 aaKnown RBP14.79□□□□□ -0.04
CTSD-206ENST00000497544 PGPA6NDG6 321 aa14.79□□□□□ -0.04
CTSD-206ENST00000497544 RBMY1EA6NEQ0 496 aaKnown RBP14.79□□□□□ -0.04
CTSD-206ENST00000497544 ZNF705FA8MVS1 300 aaPredicted RBP14.79□□□□□ -0.04
CTSD-206ENST00000497544 F6UB75 175 aa14.79□□□□□ -0.04
CTSD-206ENST00000497544 HBE1P02100 147 aa14.79□□□□□ -0.04
CTSD-206ENST00000497544 RBMY1DP0C7P1 496 aaKnown RBP14.79□□□□□ -0.04
CTSD-206ENST00000497544 RPL35AP18077 110 aaKnown RBP14.79□□□□□ -0.04
CTSD-206ENST00000497544 MRPL53Q96EL3 112 aaKnown RBP14.79□□□□□ -0.04
CTSD-206ENST00000497544 OTORQ9NRC9 128 aa14.79□□□□□ -0.04
CTSD-206ENST00000497544 FRMD6-AS1P0C7T7 363 aa14.78□□□□□ -0.04
CTSD-206ENST00000497544 CSN1S1P47710 185 aa14.78□□□□□ -0.04
CTSD-206ENST00000497544 BLOC1S1P78537 153 aa14.78□□□□□ -0.04
CTSD-206ENST00000497544 A0A0J9YX75 114 aa14.77□□□□□ -0.05
CTSD-206ENST00000497544 H3BMM0 161 aa14.77□□□□□ -0.05
CTSD-206ENST00000497544 M0R3E3 92 aa14.77□□□□□ -0.05
CTSD-206ENST00000497544 DUSP14O95147 198 aaKnown RBP14.77□□□□□ -0.05
CTSD-206ENST00000497544 HLA-DRB4P13762 266 aa14.77□□□□□ -0.05
CTSD-206ENST00000497544 GDF5OSQ5U4N7 250 aa14.77□□□□□ -0.05
CTSD-206ENST00000497544 TEX261Q6UWH6 196 aa14.77□□□□□ -0.05
CTSD-206ENST00000497544 OR4B1Q8NGF8 309 aa14.77□□□□□ -0.05
CTSD-206ENST00000497544 OR8A1Q8NGG7 326 aa14.77□□□□□ -0.05
CTSD-206ENST00000497544 CMTM2Q8TAZ6 248 aa14.77□□□□□ -0.05
CTSD-206ENST00000497544 RXFP4Q8TDU9 374 aa14.77□□□□□ -0.05
CTSD-206ENST00000497544 HLA-DRB4X5D2U9 266 aa14.77□□□□□ -0.05
CTSD-206ENST00000497544 TRAV1-1A0A0B4J248 108 aa14.76□□□□□ -0.05
CTSD-206ENST00000497544 ZNF705DP0CH99 300 aaPredicted RBP14.76□□□□□ -0.05
CTSD-206ENST00000497544 ZNF705BP0CI00 300 aaPredicted RBP14.76□□□□□ -0.05
CTSD-206ENST00000497544 PRB4P10163 310 aaPredicted RBP14.76□□□□□ -0.05
CTSD-206ENST00000497544 UBE2G2P60604 165 aa14.76□□□□□ -0.05
CTSD-206ENST00000497544 SUMO1P63165 101 aaKnown RBP14.76□□□□□ -0.05
CTSD-206ENST00000497544 LINC00322Q6ZN03 302 aaPredicted RBP14.76□□□□□ -0.05
CTSD-206ENST00000497544 OR10J6PQ8NGY7 276 aa14.76□□□□□ -0.05
CTSD-206ENST00000497544 A0A1W2PRE2 83 aa14.75□□□□□ -0.05
CTSD-206ENST00000497544 PRAC2D3DTV9 90 aa14.75□□□□□ -0.05
CTSD-206ENST00000497544 IFNA7P01567 189 aa14.75□□□□□ -0.05
CTSD-206ENST00000497544 IGKV3-20P01619 116 aa14.75□□□□□ -0.05
CTSD-206ENST00000497544 PPT1P50897 306 aa14.75□□□□□ -0.05
CTSD-206ENST00000497544 HIST1H1AQ02539 215 aaPredicted RBP14.75□□□□□ -0.05
CTSD-206ENST00000497544 TRPT1Q86TN4 253 aaKnown RBP14.75□□□□□ -0.05
CTSD-206ENST00000497544 C3orf84H3BNL1 204 aa14.74□□□□□ -0.05
CTSD-206ENST00000497544 SLC25A5P05141 298 aaKnown RBP14.74□□□□□ -0.05
CTSD-206ENST00000497544 CNN1P51911 297 aaKnown RBP14.74□□□□□ -0.05
CTSD-206ENST00000497544 APOC4P55056 127 aa14.74□□□□□ -0.05
CTSD-206ENST00000497544 NUTF2P61970 127 aaKnown RBP14.74□□□□□ -0.05
CTSD-206ENST00000497544 ZNF680Q8NEM1 530 aa14.74□□□□□ -0.05
CTSD-206ENST00000497544 NKX6-2Q9C056 277 aaPredicted RBP14.74□□□□□ -0.05
CTSD-206ENST00000497544 CSTL1Q9H114 145 aa14.74□□□□□ -0.05
CTSD-206ENST00000497544 PPP1R14DQ9NXH3 145 aa14.74□□□□□ -0.05
CTSD-206ENST00000497544 DNAH7Q8WXX0 4024 aa14.74□□□□□ -0.05
CTSD-206ENST00000497544 KIR2DL5BA0A0G2JN68 375 aa14.73□□□□□ -0.05
CTSD-206ENST00000497544 KIR2DL5BA0A0G2JPC4 375 aa14.73□□□□□ -0.05
CTSD-206ENST00000497544 MORN3Q6PF18 240 aaPredicted RBP14.73□□□□□ -0.05
CTSD-206ENST00000497544 KIR2DL5AQ8N109 375 aa14.73□□□□□ -0.05
CTSD-206ENST00000497544 KIR2DL5BQ8NHK3 375 aa14.73□□□□□ -0.05
CTSD-206ENST00000497544 CLUHP3Q96NS8 147 aa14.73□□□□□ -0.05
CTSD-206ENST00000497544 RPH3ALQ9UNE2 315 aa14.73□□□□□ -0.05
CTSD-206ENST00000497544 FAM74A7A6NL05 159 aa14.72□□□□□ -0.05
CTSD-206ENST00000497544 PAGE4O60829 102 aa14.72□□□□□ -0.05
CTSD-206ENST00000497544 CCL20P78556 96 aa14.72□□□□□ -0.05
CTSD-206ENST00000497544 HAGHQ16775 308 aa14.72□□□□□ -0.05
CTSD-206ENST00000497544 CST9LP1Q5W188 147 aa14.72□□□□□ -0.05
CTSD-206ENST00000497544 ASCL2Q99929 193 aa14.72□□□□□ -0.05
CTSD-206ENST00000497544 YTHDF2Q9Y5A9 579 aaKnown RBP14.72□□□□□ -0.05
CTSD-206ENST00000497544 PCLOQ9Y6V0 5065 aa14.72□□□□□ -0.05
CTSD-206ENST00000497544 DIRC3C9JPN6 131 aa14.71□□□□□ -0.05
CTSD-206ENST00000497544 UBE2CO00762 179 aa14.71□□□□□ -0.05
CTSD-206ENST00000497544 ARL6IP6Q8N6S5 226 aa14.71□□□□□ -0.05
CTSD-206ENST00000497544 C5orf17Q8NAS9 161 aa14.71□□□□□ -0.05
CTSD-206ENST00000497544 B9D2Q9BPU9 175 aa14.71□□□□□ -0.05
CTSD-206ENST00000497544 GNG13Q9P2W3 67 aa14.71□□□□□ -0.05
CTSD-206ENST00000497544 GGTLC3B5MD39 225 aa14.7□□□□□ -0.06
CTSD-206ENST00000497544 SBSPONQ8IVN8 264 aa14.7□□□□□ -0.06
CTSD-206ENST00000497544 LINC00477Q96M19 166 aa14.7□□□□□ -0.06
CTSD-206ENST00000497544 MANBALQ9NQG1 85 aa14.7□□□□□ -0.06
CTSD-206ENST00000497544 EPDR1Q9UM22 224 aa14.7□□□□□ -0.06
CTSD-206ENST00000497544 ARL2-SNX15V9GYD0 113 aa14.7□□□□□ -0.06
CTSD-206ENST00000497544 HERC2O95714 4834 aa14.69□□□□□ -0.06
CTSD-206ENST00000497544 IGKV2-40A0A087WW87 121 aaPredicted RBP14.69□□□□□ -0.06
CTSD-206ENST00000497544 RBAKDNA6NC62 111 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms