RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 PAX4O43316 350 aa9.75□□□□□ -0.85
VARS-228ENST00000495010 SSSCA1O60232 199 aa9.75□□□□□ -0.85
VARS-228ENST00000495010 COX7A2P2O60397 106 aa9.75□□□□□ -0.85
VARS-228ENST00000495010 CT45A10P0DMU9 189 aa9.75□□□□□ -0.85
VARS-228ENST00000495010 ID3Q02535 119 aa9.75□□□□□ -0.85
VARS-228ENST00000495010 SLC38A11Q08AI6 406 aa9.75□□□□□ -0.85
VARS-228ENST00000495010 ICAM4Q14773 271 aa9.75□□□□□ -0.85
VARS-228ENST00000495010 ZNF546Q86UE3 836 aa9.75□□□□□ -0.85
VARS-228ENST00000495010 ZBTB8BQ8NAP8 495 aaPredicted RBP9.75□□□□□ -0.85
VARS-228ENST00000495010 GSN-AS1Q9NRJ2 163 aa9.75□□□□□ -0.85
VARS-228ENST00000495010 FUT9Q9Y231 359 aa9.75□□□□□ -0.85
VARS-228ENST00000495010 TNFRSF18Q9Y5U5 241 aa9.75□□□□□ -0.85
VARS-228ENST00000495010 FNDC10F2Z333 226 aa9.74□□□□□ -0.85
VARS-228ENST00000495010 SMR3BP02814 79 aaPredicted RBP9.74□□□□□ -0.85
VARS-228ENST00000495010 METTL15P1P0C7V9 234 aa9.74□□□□□ -0.85
VARS-228ENST00000495010 SMIM18P0DKX4 95 aa9.74□□□□□ -0.85
VARS-228ENST00000495010 KRTAP10-1P60331 282 aa9.74□□□□□ -0.85
VARS-228ENST00000495010 ZNF431Q8TF32 576 aaPredicted RBP9.74□□□□□ -0.85
VARS-228ENST00000495010 SMIM8Q96KF7 97 aa9.74□□□□□ -0.85
VARS-228ENST00000495010 ODF3Q96PU9 254 aa9.74□□□□□ -0.85
VARS-228ENST00000495010 A0A087WTM6 91 aa9.73□□□□□ -0.85
VARS-228ENST00000495010 K7EPK0 472 aa9.73□□□□□ -0.85
VARS-228ENST00000495010 SLC17A3O00476 420 aa9.73□□□□□ -0.85
VARS-228ENST00000495010 CCNKO75909 580 aa9.73□□□□□ -0.85
VARS-228ENST00000495010 SLC25A5P05141 298 aaKnown RBP9.73□□□□□ -0.85
VARS-228ENST00000495010 DNAH10OSP0CZ25 163 aa9.73□□□□□ -0.85
VARS-228ENST00000495010 TNFSF8P32971 234 aa9.73□□□□□ -0.85
VARS-228ENST00000495010 PYDC2Q56P42 97 aa9.73□□□□□ -0.85
VARS-228ENST00000495010 C10orf113Q5VZT2 155 aa9.73□□□□□ -0.85
VARS-228ENST00000495010 DYNC2LI1Q8TCX1 351 aa9.73□□□□□ -0.85
VARS-228ENST00000495010 C18orf15Q96N68 181 aa9.73□□□□□ -0.85
VARS-228ENST00000495010 MDFICQ9P1T7 246 aa9.73□□□□□ -0.85
VARS-228ENST00000495010 LINC00854A0A1B0GVQ3 168 aa9.72□□□□□ -0.85
VARS-228ENST00000495010 NPIPB6E9PJ23 425 aa9.72□□□□□ -0.85
VARS-228ENST00000495010 J3QL48 77 aa9.72□□□□□ -0.85
VARS-228ENST00000495010 AGPAT2O15120 278 aa9.72□□□□□ -0.85
VARS-228ENST00000495010 ZNF324O75467 553 aaPredicted RBP9.72□□□□□ -0.85
VARS-228ENST00000495010 SCGB1D2O95969 90 aa9.72□□□□□ -0.85
VARS-228ENST00000495010 GCSHP23434 173 aa9.72□□□□□ -0.85
VARS-228ENST00000495010 GUK1Q16774 197 aa9.72□□□□□ -0.85
VARS-228ENST00000495010 EIF4E3Q8N5X7 224 aaKnown RBP9.72□□□□□ -0.85
VARS-228ENST00000495010 RAB2BQ8WUD1 216 aa9.72□□□□□ -0.85
VARS-228ENST00000495010 MRPS26Q9BYN8 205 aaKnown RBP9.72□□□□□ -0.85
VARS-228ENST00000495010 LY96Q9Y6Y9 160 aa9.72□□□□□ -0.85
VARS-228ENST00000495010 C7orf71A4D174 169 aa9.71□□□□□ -0.86
VARS-228ENST00000495010 IGHV3-53P01767 116 aa9.71□□□□□ -0.86
VARS-228ENST00000495010 SLAQ13239 276 aa9.71□□□□□ -0.86
VARS-228ENST00000495010 OPCMLQ14982 345 aa9.71□□□□□ -0.86
VARS-228ENST00000495010 MRPL23Q16540 153 aaKnown RBP9.71□□□□□ -0.86
VARS-228ENST00000495010 TMEM14EPQ6UXP3 125 aa9.71□□□□□ -0.86
VARS-228ENST00000495010 Q6ZRG5 221 aa9.71□□□□□ -0.86
VARS-228ENST00000495010 SOSTQ9BQB4 213 aa9.71□□□□□ -0.86
VARS-228ENST00000495010 PRO0255Q9UI72 69 aa9.71□□□□□ -0.86
VARS-228ENST00000495010 H3BQ15 152 aa9.7□□□□□ -0.86
VARS-228ENST00000495010 NOL3O60936 208 aaKnown RBP9.7□□□□□ -0.86
VARS-228ENST00000495010 IGLC2P0DOY2 106 aa9.7□□□□□ -0.86
VARS-228ENST00000495010 UBE2MP61081 183 aaKnown RBP9.7□□□□□ -0.86
VARS-228ENST00000495010 RAB31Q13636 194 aa9.7□□□□□ -0.86
VARS-228ENST00000495010 ANXA2RQ3ZCQ2 193 aa9.7□□□□□ -0.86
VARS-228ENST00000495010 C4orf46Q504U0 113 aa9.7□□□□□ -0.86
VARS-228ENST00000495010 LYPD5Q6UWN5 251 aa9.7□□□□□ -0.86
VARS-228ENST00000495010 Q6ZSN1 163 aa9.7□□□□□ -0.86
VARS-228ENST00000495010 C11orf72Q8NBR9 251 aa9.7□□□□□ -0.86
VARS-228ENST00000495010 TMEM37Q8WXS4 190 aa9.7□□□□□ -0.86
VARS-228ENST00000495010 SAT2Q96F10 170 aaPredicted RBP9.7□□□□□ -0.86
VARS-228ENST00000495010 ST6GAL2Q96JF0 529 aa9.7□□□□□ -0.86
VARS-228ENST00000495010 MSRB1Q9NZV6 116 aa9.7□□□□□ -0.86
VARS-228ENST00000495010 HHLA3Q9XRX5 114 aa9.7□□□□□ -0.86
VARS-228ENST00000495010 KLF12Q9Y4X4 402 aa9.7□□□□□ -0.86
VARS-228ENST00000495010 C9orf170A2RU37 121 aa9.69□□□□□ -0.86
VARS-228ENST00000495010 RGS13O14921 159 aa9.69□□□□□ -0.86
VARS-228ENST00000495010 SPINK4O60575 86 aa9.69□□□□□ -0.86
VARS-228ENST00000495010 TSC22D2O75157 780 aa9.69□□□□□ -0.86
VARS-228ENST00000495010 MPDU1O75352 247 aa9.69□□□□□ -0.86
VARS-228ENST00000495010 EVI2AP22794 236 aa9.69□□□□□ -0.86
VARS-228ENST00000495010 RNASE4P34096 147 aaKnown RBP9.69□□□□□ -0.86
VARS-228ENST00000495010 TCL1AP56279 114 aa9.69□□□□□ -0.86
VARS-228ENST00000495010 MORN5Q5VZ52 161 aa9.69□□□□□ -0.86
VARS-228ENST00000495010 NEGR1Q7Z3B1 354 aa9.69□□□□□ -0.86
VARS-228ENST00000495010 DEDD2Q8WXF8 326 aa9.69□□□□□ -0.86
VARS-228ENST00000495010 TRIM63Q969Q1 353 aa9.69□□□□□ -0.86
VARS-228ENST00000495010 LINC00467Q9BRT7 94 aa9.69□□□□□ -0.86
VARS-228ENST00000495010 GGACTQ9BVM4 153 aa9.69□□□□□ -0.86
VARS-228ENST00000495010 DNAJC4Q9NNZ3 241 aa9.69□□□□□ -0.86
VARS-228ENST00000495010 K7EP13 123 aa9.68□□□□□ -0.86
VARS-228ENST00000495010 PRAF2O60831 178 aa9.68□□□□□ -0.86
VARS-228ENST00000495010 GPX1P07203 203 aa9.68□□□□□ -0.86
VARS-228ENST00000495010 CRYBA4P53673 196 aa9.68□□□□□ -0.86
VARS-228ENST00000495010 TMBIM6P55061 237 aa9.68□□□□□ -0.86
VARS-228ENST00000495010 TAS2R30P59541 319 aa9.68□□□□□ -0.86
VARS-228ENST00000495010 ERCC8Q13216 396 aa9.68□□□□□ -0.86
VARS-228ENST00000495010 BTN1A1Q13410 526 aa9.68□□□□□ -0.86
VARS-228ENST00000495010 OR1L4Q8NGR5 311 aa9.68□□□□□ -0.86
VARS-228ENST00000495010 LINC00477Q96M19 166 aa9.68□□□□□ -0.86
VARS-228ENST00000495010 C8orf49Q96NF6 230 aa9.68□□□□□ -0.86
VARS-228ENST00000495010 MGST2Q99735 147 aa9.68□□□□□ -0.86
VARS-228ENST00000495010 ARPC5LQ9BPX5 153 aa9.68□□□□□ -0.86
VARS-228ENST00000495010 BCL7BQ9BQE9 202 aa9.68□□□□□ -0.86
VARS-228ENST00000495010 SLIRPQ9GZT3 109 aaKnown RBP9.68□□□□□ -0.86
VARS-228ENST00000495010 MRPL16Q9NX20 251 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms