RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 KPNA4O00629 521 aaPredicted RBP0.61□□□□□ -2.31
HMGB1P30-201ENST00000492455 BCL2P10415 239 aa0.61□□□□□ -2.31
HMGB1P30-201ENST00000492455 CIRBPQ14011 172 aaKnown RBP0.61□□□□□ -2.31
HMGB1P30-201ENST00000492455 Q8N6K4 173 aa0.61□□□□□ -2.31
HMGB1P30-201ENST00000492455 PLPP5Q8NEB5 264 aa0.61□□□□□ -2.31
HMGB1P30-201ENST00000492455 DIRC1Q969H9 104 aa0.61□□□□□ -2.31
HMGB1P30-201ENST00000492455 CCDC32Q9BV29 185 aa0.61□□□□□ -2.31
HMGB1P30-201ENST00000492455 MYH3P11055 1940 aa0.61□□□□□ -2.31
HMGB1P30-201ENST00000492455 TECPR2O15040 1411 aa0.61□□□□□ -2.31
HMGB1P30-201ENST00000492455 CASP8AP2Q9UKL3 1982 aa0.61□□□□□ -2.31
HMGB1P30-201ENST00000492455 PLXNA4Q9HCM2 1894 aa0.61□□□□□ -2.31
HMGB1P30-201ENST00000492455 NCAPD3P42695 1498 aa0.61□□□□□ -2.31
HMGB1P30-201ENST00000492455 TRPM1Q7Z4N2 1603 aa0.6□□□□□ -2.31
HMGB1P30-201ENST00000492455 UBR2Q8IWV8 1755 aa0.6□□□□□ -2.31
HMGB1P30-201ENST00000492455 NISCHQ9Y2I1 1504 aa0.6□□□□□ -2.31
HMGB1P30-201ENST00000492455 EML5Q05BV3 1969 aa0.6□□□□□ -2.31
HMGB1P30-201ENST00000492455 GABARAPH6UMI1 98 aa0.6□□□□□ -2.31
HMGB1P30-201ENST00000492455 PGRMC1O00264 195 aaKnown RBP0.6□□□□□ -2.31
HMGB1P30-201ENST00000492455 MT-ND6P03923 174 aa0.6□□□□□ -2.31
HMGB1P30-201ENST00000492455 S100A11P31949 105 aa0.6□□□□□ -2.31
HMGB1P30-201ENST00000492455 EFNA4P52798 201 aa0.6□□□□□ -2.31
HMGB1P30-201ENST00000492455 MRPS36P82909 103 aaKnown RBP0.6□□□□□ -2.31
HMGB1P30-201ENST00000492455 MIR22HGQ0VDD5 57 aa0.6□□□□□ -2.31
HMGB1P30-201ENST00000492455 FOXI2Q6ZQN5 318 aa0.6□□□□□ -2.31
HMGB1P30-201ENST00000492455 ANGPTL5Q86XS5 388 aa0.6□□□□□ -2.31
HMGB1P30-201ENST00000492455 LINC00269Q8N2A0 174 aa0.6□□□□□ -2.31
HMGB1P30-201ENST00000492455 CCL4L1Q8NHW4 92 aa0.6□□□□□ -2.31
HMGB1P30-201ENST00000492455 MCEEQ96PE7 176 aa0.6□□□□□ -2.31
HMGB1P30-201ENST00000492455 LAMTOR2Q9Y2Q5 125 aa0.6□□□□□ -2.31
HMGB1P30-201ENST00000492455 MGAMO43451 1857 aa0.59□□□□□ -2.31
HMGB1P30-201ENST00000492455 FRMPD1Q5SYB0 1578 aa0.59□□□□□ -2.31
HMGB1P30-201ENST00000492455 TRAPPC8Q9Y2L5 1435 aa0.59□□□□□ -2.31
HMGB1P30-201ENST00000492455 A0A1B0GV72 72 aa0.59□□□□□ -2.31
HMGB1P30-201ENST00000492455 E7EQ34 232 aa0.59□□□□□ -2.31
HMGB1P30-201ENST00000492455 JMJD7-PLA2G4BH0Y9G9 81 aa0.59□□□□□ -2.31
HMGB1P30-201ENST00000492455 PFDN1O60925 122 aa0.59□□□□□ -2.31
HMGB1P30-201ENST00000492455 IFNA21P01568 189 aa0.59□□□□□ -2.31
HMGB1P30-201ENST00000492455 IGHV3-33P01772 117 aa0.59□□□□□ -2.31
HMGB1P30-201ENST00000492455 FABP2P12104 132 aa0.59□□□□□ -2.31
HMGB1P30-201ENST00000492455 TFAMQ00059 246 aaKnown RBP0.59□□□□□ -2.31
HMGB1P30-201ENST00000492455 DIAPH2-AS1Q14236 149 aa0.59□□□□□ -2.31
HMGB1P30-201ENST00000492455 THEM6Q8WUY1 208 aa0.59□□□□□ -2.31
HMGB1P30-201ENST00000492455 RMND5BQ96G75 393 aaPredicted RBP0.59□□□□□ -2.31
HMGB1P30-201ENST00000492455 OR4C12Q96R67 309 aa0.59□□□□□ -2.31
HMGB1P30-201ENST00000492455 WFDC10AQ9H1F0 79 aa0.59□□□□□ -2.31
HMGB1P30-201ENST00000492455 TCEAL2Q9H3H9 227 aaPredicted RBP0.59□□□□□ -2.31
HMGB1P30-201ENST00000492455 TPRKBQ9Y3C4 175 aa0.59□□□□□ -2.31
HMGB1P30-201ENST00000492455 ALPK3Q96L96 1907 aa0.59□□□□□ -2.32
HMGB1P30-201ENST00000492455 AHNAKQ09666 5890 aaKnown RBP0.58□□□□□ -2.32
HMGB1P30-201ENST00000492455 A0A096LPI6 279 aa0.58□□□□□ -2.32
HMGB1P30-201ENST00000492455 PPYP01298 95 aa0.58□□□□□ -2.32
HMGB1P30-201ENST00000492455 FABP4P15090 132 aa0.58□□□□□ -2.32
HMGB1P30-201ENST00000492455 SDC2P34741 201 aa0.58□□□□□ -2.32
HMGB1P30-201ENST00000492455 VMA21Q3ZAQ7 101 aa0.58□□□□□ -2.32
HMGB1P30-201ENST00000492455 GLIPR1L1Q6UWM5 242 aa0.58□□□□□ -2.32
HMGB1P30-201ENST00000492455 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.58□□□□□ -2.32
HMGB1P30-201ENST00000492455 OR4B1Q8NGF8 309 aa0.58□□□□□ -2.32
HMGB1P30-201ENST00000492455 SELENOSQ9BQE4 189 aa0.58□□□□□ -2.32
HMGB1P30-201ENST00000492455 EFCAB11Q9BUY7 163 aa0.58□□□□□ -2.32
HMGB1P30-201ENST00000492455 DDA1Q9BW61 102 aa0.58□□□□□ -2.32
HMGB1P30-201ENST00000492455 CST11Q9H112 138 aa0.58□□□□□ -2.32
HMGB1P30-201ENST00000492455 MED31Q9Y3C7 131 aa0.58□□□□□ -2.32
HMGB1P30-201ENST00000492455 KIAA1107Q9UPP5 1409 aa0.57□□□□□ -2.32
HMGB1P30-201ENST00000492455 NUP210LQ5VU65 1888 aa0.57□□□□□ -2.32
HMGB1P30-201ENST00000492455 E9PCH4 1651 aa0.57□□□□□ -2.32
HMGB1P30-201ENST00000492455 TRBV27A0A0K0K1C4 114 aa0.57□□□□□ -2.32
HMGB1P30-201ENST00000492455 POLR2HP52434 150 aaKnown RBP0.57□□□□□ -2.32
HMGB1P30-201ENST00000492455 NDUFA6P56556 154 aa0.57□□□□□ -2.32
HMGB1P30-201ENST00000492455 SPATA45Q537H7 98 aa0.57□□□□□ -2.32
HMGB1P30-201ENST00000492455 TMEM128Q5BJH2 165 aa0.57□□□□□ -2.32
HMGB1P30-201ENST00000492455 HRCT1Q6UXD1 115 aa0.57□□□□□ -2.32
HMGB1P30-201ENST00000492455 TOMM20LQ6UXN7 152 aa0.57□□□□□ -2.32
HMGB1P30-201ENST00000492455 ZCCHC23Q6ZST2 131 aa0.57□□□□□ -2.32
HMGB1P30-201ENST00000492455 LINC00305Q7Z4B0 112 aa0.57□□□□□ -2.32
HMGB1P30-201ENST00000492455 OR5H6Q8NGV6 325 aa0.57□□□□□ -2.32
HMGB1P30-201ENST00000492455 PRELID3AQ96N28 172 aa0.57□□□□□ -2.32
HMGB1P30-201ENST00000492455 NIT2Q9NQR4 276 aa0.57□□□□□ -2.32
HMGB1P30-201ENST00000492455 HSPB8Q9UJY1 196 aa0.57□□□□□ -2.32
HMGB1P30-201ENST00000492455 COL24A1Q17RW2 1714 aa0.57□□□□□ -2.32
HMGB1P30-201ENST00000492455 N4BP2Q86UW6 1770 aaPredicted RBP0.57□□□□□ -2.32
HMGB1P30-201ENST00000492455 BCL9O00512 1426 aa0.56□□□□□ -2.32
HMGB1P30-201ENST00000492455 PTPRFP10586 1907 aa0.56□□□□□ -2.32
HMGB1P30-201ENST00000492455 TRAV23DV6A0A075B6W5 121 aa0.56□□□□□ -2.32
HMGB1P30-201ENST00000492455 A0A1W2PPM0 123 aa0.56□□□□□ -2.32
HMGB1P30-201ENST00000492455 H3BMG7 143 aa0.56□□□□□ -2.32
HMGB1P30-201ENST00000492455 FAM107AO95990 144 aa0.56□□□□□ -2.32
HMGB1P30-201ENST00000492455 IGLV3-1P01715 115 aa0.56□□□□□ -2.32
HMGB1P30-201ENST00000492455 TRACP01848 142 aa0.56□□□□□ -2.32
HMGB1P30-201ENST00000492455 RPL7P18124 248 aaKnown RBP0.56□□□□□ -2.32
HMGB1P30-201ENST00000492455 B2MP61769 119 aa0.56□□□□□ -2.32
HMGB1P30-201ENST00000492455 LINC00575Q6W349 94 aa0.56□□□□□ -2.32
HMGB1P30-201ENST00000492455 SMIM15Q7Z3B0 74 aa0.56□□□□□ -2.32
HMGB1P30-201ENST00000492455 SBSPONQ8IVN8 264 aa0.56□□□□□ -2.32
HMGB1P30-201ENST00000492455 OR9Q1Q8NGQ5 310 aa0.56□□□□□ -2.32
HMGB1P30-201ENST00000492455 OR10AC1Q8NH08 325 aa0.56□□□□□ -2.32
HMGB1P30-201ENST00000492455 GRPEL2Q8TAA5 225 aa0.56□□□□□ -2.32
HMGB1P30-201ENST00000492455 LXNQ9BS40 222 aa0.56□□□□□ -2.32
HMGB1P30-201ENST00000492455 ZDBF2Q9HCK1 2354 aa0.56□□□□□ -2.32
HMGB1P30-201ENST00000492455 ZGRF1Q86YA3 2104 aa0.55□□□□□ -2.32
HMGB1P30-201ENST00000492455 MUC4Q99102 2169 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms