RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	ODF3	Q96PU9	254 aa		12.94	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	DUXB	A0A1W2PPF3	345 aa		12.93	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	SMCO3	A2RU48	225 aa		12.93	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	PRAC2	D3DTV9	90 aa		12.93	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	MRPS12	O15235	138 aa	Known RBP	12.93	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	SYNGR2	O43760	224 aa		12.93	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	SPINK4	O60575	86 aa		12.93	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	OXT	P01178	125 aa		12.93	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	IGHV3-53	P01767	116 aa		12.93	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	SLC25A6	P12236	298 aa		12.93	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	WFDC10B	Q8IUB3	73 aa		12.93	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	CLVS1	Q8IUQ0	354 aa	Predicted RBP	12.93	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	SCP2D1	Q9UJQ7	156 aa		12.93	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	ANXA2R	Q3ZCQ2	193 aa		12.92	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334		Q8N814	137 aa		12.92	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	C8orf49	Q96NF6	230 aa		12.92	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	ARL6	Q9H0F7	186 aa		12.92	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	STRAP	Q9Y3F4	350 aa	Known RBP	12.92	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	SLC25A5	P05141	298 aa	Known RBP	12.91	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	C4orf46	Q504U0	113 aa		12.91	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	EIF4E3	Q8N5X7	224 aa	Known RBP	12.91	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	MRPL32	Q9BYC8	188 aa	Known RBP	12.91	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	ARV1	Q9H2C2	271 aa		12.91	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	KLF12	Q9Y4X4	402 aa		12.91	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	PXMP4	Q9Y6I8	212 aa		12.91	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	SNRPC	P09234	159 aa	Known RBP	12.9	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	SRI	P30626	198 aa		12.9	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	TCL1A	P56279	114 aa		12.9	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	FHL2	Q14192	279 aa		12.9	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	TEPP	Q6URK8	271 aa		12.9	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	PATE2	Q6UY27	113 aa		12.9	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	BPIFA4P	Q86YQ2	179 aa		12.9	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	FUNDC2	Q9BWH2	189 aa		12.9	□□□□□ -0.34
CDK5RAP2-218	ENST00000491334	LINC00854	A0A1B0GVQ3	168 aa		12.89	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	C7orf71	A4D174	169 aa		12.89	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334		E5RGE8	158 aa		12.89	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	PXDC1	Q5TGL8	231 aa		12.89	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	SMIM4	Q8WVI0	70 aa		12.89	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	VGLL1	Q99990	258 aa		12.89	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334		A0A087WXM4	84 aa		12.88	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	TRAV5	A0A0B4J249	113 aa		12.88	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334		K7EQD1	137 aa		12.88	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	LINC00305	Q7Z4B0	112 aa		12.88	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	PCNP	Q8WW12	178 aa	Known RBP	12.88	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	TRGV4	A0A0C4DH28	118 aa		12.87	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334		H3BP45	60 aa		12.87	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	IBA57	Q5T440	356 aa	Known RBP	12.87	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	LRP1	Q07954	4544 aa	Known RBP	12.87	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334		H3BTX0	84 aa		12.86	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	SLC17A3	O00476	420 aa		12.86	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334		Q6ZSA8	131 aa		12.86	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	LRTM2	Q8N967	370 aa		12.86	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	NPVF	Q9HCQ7	196 aa		12.86	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	MCUB	Q9NWR8	336 aa		12.86	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	MRPL16	Q9NX20	251 aa	Known RBP	12.86	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	RCL1	Q9Y2P8	373 aa	Known RBP	12.86	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334		K7EPK0	472 aa		12.85	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	MPDU1	O75352	247 aa		12.85	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	ORM1	P02763	201 aa		12.85	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	ZNF415	Q09FC8	603 aa		12.85	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	TMEM128	Q5BJH2	165 aa		12.85	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	SAT2	Q96F10	170 aa	Predicted RBP	12.85	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	TXNDC17	Q9BRA2	123 aa		12.85	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	RABL2B	Q9UNT1	228 aa		12.85	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	ANKRD20A5P	A0PJZ0	165 aa		12.84	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	GOSR2	O14653	212 aa		12.84	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	RGS5	O15539	181 aa		12.84	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	GYPE	P15421	78 aa		12.84	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	RNASE4	P34096	147 aa	Known RBP	12.84	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	IQCF2	Q8IXL9	164 aa		12.84	□□□□□ -0.35
CDK5RAP2-218	ENST00000491334	IBA57-AS1	B1ANH7	110 aa		12.83	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334	KLLN	B2CW77	178 aa		12.83	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334	RGS13	O14921	159 aa		12.83	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334	CTDSPL	O15194	276 aa		12.83	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334	CD300C	Q08708	224 aa		12.83	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334	GUK1	Q16774	197 aa		12.83	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334	LINC00477	Q96M19	166 aa		12.83	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334	MIXL1	Q9H2W2	232 aa		12.83	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334	PSENEN	Q9NZ42	101 aa		12.83	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334	DNAH8	Q96JB1	4490 aa		12.83	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334	IGHV3-38	A0A0C4DH36	116 aa		12.82	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334		H3BQ15	152 aa		12.82	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334	ATP6V1G2	O95670	118 aa		12.82	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334	IGLC2	P0DOY2	106 aa		12.82	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334	RRAS2	P62070	204 aa	Predicted RBP	12.82	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334	BTN1A1	Q13410	526 aa		12.82	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334	RABL2A	Q9UBK7	228 aa	Predicted RBP	12.82	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334	FNDC10	F2Z333	226 aa		12.81	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334	COX7A2P2	O60397	106 aa		12.81	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334	GPX1	P07203	203 aa		12.81	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334	VAMP1	P23763	118 aa		12.81	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334	ERCC8	Q13216	396 aa		12.81	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334	IL18	Q14116	193 aa		12.81	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334	ZNF546	Q86UE3	836 aa		12.81	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334	ARPC5L	Q9BPX5	153 aa		12.81	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334		Q9HAA7	133 aa		12.81	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334	TP53TG3	Q9ULZ0	132 aa		12.81	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334	BOLA1	Q9Y3E2	137 aa		12.81	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334	HOXB5	P09067	269 aa		12.8	□□□□□ -0.36
CDK5RAP2-218	ENST00000491334	POLR2G	P62487	172 aa	Known RBP eCLIP	12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms