RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 ZNF586Q9NXT0 402 aa10.95□□□□□ -0.66
PLOD3-216ENST00000489927 FLVCR2Q9UPI3 526 aa10.95□□□□□ -0.66
PLOD3-216ENST00000489927 TRAV12-3A0A0B4J271 114 aa10.94□□□□□ -0.66
PLOD3-216ENST00000489927 LINC00854A0A1B0GVQ3 168 aa10.94□□□□□ -0.66
PLOD3-216ENST00000489927 COX7A2P2O60397 106 aa10.94□□□□□ -0.66
PLOD3-216ENST00000489927 IGLC2P0DOY2 106 aa10.94□□□□□ -0.66
PLOD3-216ENST00000489927 RCL1Q9Y2P8 373 aaKnown RBP10.94□□□□□ -0.66
PLOD3-216ENST00000489927 H3BQ15 152 aa10.93□□□□□ -0.66
PLOD3-216ENST00000489927 TSC22D2O75157 780 aa10.93□□□□□ -0.66
PLOD3-216ENST00000489927 NDUFB6O95139 128 aa10.93□□□□□ -0.66
PLOD3-216ENST00000489927 OR4E1P0C645 316 aa10.93□□□□□ -0.66
PLOD3-216ENST00000489927 CT45A10P0DMU9 189 aa10.93□□□□□ -0.66
PLOD3-216ENST00000489927 S100A5P33763 92 aa10.93□□□□□ -0.66
PLOD3-216ENST00000489927 OPCMLQ14982 345 aa10.93□□□□□ -0.66
PLOD3-216ENST00000489927 IAH1Q2TAA2 248 aaPredicted RBP10.93□□□□□ -0.66
PLOD3-216ENST00000489927 Q6ZTI0 123 aa10.93□□□□□ -0.66
PLOD3-216ENST00000489927 ZNF431Q8TF32 576 aaPredicted RBP10.93□□□□□ -0.66
PLOD3-216ENST00000489927 SAT2Q96F10 170 aaPredicted RBP10.93□□□□□ -0.66
PLOD3-216ENST00000489927 MGST2Q99735 147 aa10.93□□□□□ -0.66
PLOD3-216ENST00000489927 PXMP4Q9Y6I8 212 aa10.93□□□□□ -0.66
PLOD3-216ENST00000489927 A0A096LPF7 62 aa10.92□□□□□ -0.66
PLOD3-216ENST00000489927 LINC00315P59091 139 aa10.92□□□□□ -0.66
PLOD3-216ENST00000489927 TAS2R30P59541 319 aa10.92□□□□□ -0.66
PLOD3-216ENST00000489927 DAZ2Q13117 558 aaKnown RBP10.92□□□□□ -0.66
PLOD3-216ENST00000489927 C10orf113Q5VZT2 155 aa10.92□□□□□ -0.66
PLOD3-216ENST00000489927 VSIG2Q96IQ7 327 aa10.92□□□□□ -0.66
PLOD3-216ENST00000489927 ODF3Q96PU9 254 aa10.92□□□□□ -0.66
PLOD3-216ENST00000489927 PYGO2Q9BRQ0 406 aa10.92□□□□□ -0.66
PLOD3-216ENST00000489927 GGACTQ9BVM4 153 aa10.92□□□□□ -0.66
PLOD3-216ENST00000489927 C7orf66A4D0T2 115 aa10.91□□□□□ -0.66
PLOD3-216ENST00000489927 NPIPB6E9PJ23 425 aa10.91□□□□□ -0.66
PLOD3-216ENST00000489927 LEPP41159 167 aa10.91□□□□□ -0.66
PLOD3-216ENST00000489927 C4orf46Q504U0 113 aa10.91□□□□□ -0.66
PLOD3-216ENST00000489927 Q6ZRN7 208 aaPredicted RBP10.91□□□□□ -0.66
PLOD3-216ENST00000489927 SRRQ9GZT4 340 aa10.91□□□□□ -0.66
PLOD3-216ENST00000489927 GSKIPQ9P0R6 139 aa10.91□□□□□ -0.66
PLOD3-216ENST00000489927 TRAV5A0A0B4J249 113 aa10.9□□□□□ -0.66
PLOD3-216ENST00000489927 NAP1L6A6NFF2 107 aa10.9□□□□□ -0.66
PLOD3-216ENST00000489927 GSN-AS1Q9NRJ2 163 aa10.9□□□□□ -0.66
PLOD3-216ENST00000489927 FAT1Q14517 4588 aa10.9□□□□□ -0.67
PLOD3-216ENST00000489927 TRGV2A0A075B6R0 118 aa10.89□□□□□ -0.67
PLOD3-216ENST00000489927 MBPP02686 304 aaPredicted RBP10.89□□□□□ -0.67
PLOD3-216ENST00000489927 CAMLGP49069 296 aa10.89□□□□□ -0.67
PLOD3-216ENST00000489927 INPP1P49441 399 aa10.89□□□□□ -0.67
PLOD3-216ENST00000489927 BAK1Q16611 211 aa10.89□□□□□ -0.67
PLOD3-216ENST00000489927 GUK1Q16774 197 aa10.89□□□□□ -0.67
PLOD3-216ENST00000489927 C11orf72Q8NBR9 251 aa10.89□□□□□ -0.67
PLOD3-216ENST00000489927 C18orf15Q96N68 181 aa10.89□□□□□ -0.67
PLOD3-216ENST00000489927 DNAJC4Q9NNZ3 241 aa10.89□□□□□ -0.67
PLOD3-216ENST00000489927 FUSP35637 526 aaKnown RBP eCLIP10.88□□□□□ -0.67
PLOD3-216ENST00000489927 SPANXN2Q5MJ10 180 aa10.88□□□□□ -0.67
PLOD3-216ENST00000489927 MIC13Q5XKP0 118 aa10.88□□□□□ -0.67
PLOD3-216ENST00000489927 Q6ZRG5 221 aa10.88□□□□□ -0.67
PLOD3-216ENST00000489927 ZNF680Q8NEM1 530 aa10.88□□□□□ -0.67
PLOD3-216ENST00000489927 TRGV1A0A0A0MS02 117 aa10.87□□□□□ -0.67
PLOD3-216ENST00000489927 C7orf71A4D174 169 aa10.87□□□□□ -0.67
PLOD3-216ENST00000489927 EPM2AB3EWF7 344 aa10.87□□□□□ -0.67
PLOD3-216ENST00000489927 M0R3E3 92 aa10.87□□□□□ -0.67
PLOD3-216ENST00000489927 SIVA1O15304 175 aa10.87□□□□□ -0.67
PLOD3-216ENST00000489927 SLC25A5P05141 298 aaKnown RBP10.87□□□□□ -0.67
PLOD3-216ENST00000489927 BTCP35070 178 aa10.87□□□□□ -0.67
PLOD3-216ENST00000489927 ERCC8Q13216 396 aa10.87□□□□□ -0.67
PLOD3-216ENST00000489927 TRIQKQ629K1 86 aa10.87□□□□□ -0.67
PLOD3-216ENST00000489927 NRARPQ7Z6K4 114 aa10.87□□□□□ -0.67
PLOD3-216ENST00000489927 MITD1Q8WV92 249 aa10.87□□□□□ -0.67
PLOD3-216ENST00000489927 FUT9Q9Y231 359 aa10.87□□□□□ -0.67
PLOD3-216ENST00000489927 CCDC160A6NGH7 325 aa10.86□□□□□ -0.67
PLOD3-216ENST00000489927 KLLNB2CW77 178 aa10.86□□□□□ -0.67
PLOD3-216ENST00000489927 ZNF324O75467 553 aaPredicted RBP10.86□□□□□ -0.67
PLOD3-216ENST00000489927 CD300CQ08708 224 aa10.86□□□□□ -0.67
PLOD3-216ENST00000489927 BTN1A1Q13410 526 aa10.86□□□□□ -0.67
PLOD3-216ENST00000489927 RAB31Q13636 194 aa10.86□□□□□ -0.67
PLOD3-216ENST00000489927 OR1L4Q8NGR5 311 aa10.86□□□□□ -0.67
PLOD3-216ENST00000489927 KLF12Q9Y4X4 402 aa10.86□□□□□ -0.67
PLOD3-216ENST00000489927 TRBV19A0A075B6N1 114 aa10.85□□□□□ -0.67
PLOD3-216ENST00000489927 L7N2F9 121 aa10.85□□□□□ -0.67
PLOD3-216ENST00000489927 CCSO14618 274 aa10.85□□□□□ -0.67
PLOD3-216ENST00000489927 ZNF253O75346 499 aa10.85□□□□□ -0.67
PLOD3-216ENST00000489927 CST7O76096 145 aa10.85□□□□□ -0.67
PLOD3-216ENST00000489927 NXPH4O95158 308 aa10.85□□□□□ -0.67
PLOD3-216ENST00000489927 VAMP2P63027 116 aa10.85□□□□□ -0.67
PLOD3-216ENST00000489927 EIF4E3Q8N5X7 224 aaKnown RBP10.85□□□□□ -0.67
PLOD3-216ENST00000489927 MRPL53Q96EL3 112 aaKnown RBP10.85□□□□□ -0.67
PLOD3-216ENST00000489927 FAM19A4Q96LR4 140 aa10.85□□□□□ -0.67
PLOD3-216ENST00000489927 PFDN5Q99471 154 aa10.85□□□□□ -0.67
PLOD3-216ENST00000489927 LINC00467Q9BRT7 94 aa10.85□□□□□ -0.67
PLOD3-216ENST00000489927 PGPEP1Q9NXJ5 209 aa10.85□□□□□ -0.67
PLOD3-216ENST00000489927 TNFRSF18Q9Y5U5 241 aa10.85□□□□□ -0.67
PLOD3-216ENST00000489927 SPINK4O60575 86 aa10.84□□□□□ -0.67
PLOD3-216ENST00000489927 RNASE4P34096 147 aaKnown RBP10.84□□□□□ -0.67
PLOD3-216ENST00000489927 BCAP31P51572 246 aa10.84□□□□□ -0.67
PLOD3-216ENST00000489927 CAV2P51636 162 aa10.84□□□□□ -0.67
PLOD3-216ENST00000489927 ANXA2RQ3ZCQ2 193 aa10.84□□□□□ -0.67
PLOD3-216ENST00000489927 AGPAT4-IT1Q9H0P7 198 aa10.84□□□□□ -0.67
PLOD3-216ENST00000489927 WDR83OSQ9Y284 106 aa10.84□□□□□ -0.67
PLOD3-216ENST00000489927 LSM5Q9Y4Y9 91 aaKnown RBP10.84□□□□□ -0.67
PLOD3-216ENST00000489927 ICOSQ9Y6W8 199 aa10.84□□□□□ -0.67
PLOD3-216ENST00000489927 CENPXA8MT69 81 aa10.83□□□□□ -0.68
PLOD3-216ENST00000489927 EREGO14944 169 aa10.83□□□□□ -0.68
PLOD3-216ENST00000489927 PAX4O43316 350 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms