RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 GNB4Q9HAV0 340 aa4.95□□□□□ -1.62
SF3A3-208ENST00000489537 ZNF331Q9NQX6 463 aaPredicted RBP4.95□□□□□ -1.62
SF3A3-208ENST00000489537 NAT8BQ9UHF3 227 aa4.95□□□□□ -1.62
SF3A3-208ENST00000489537 SONP18583 2426 aaKnown RBP4.95□□□□□ -1.62
SF3A3-208ENST00000489537 TRBV20OR9-2A0A075B6H5 130 aa4.94□□□□□ -1.62
SF3A3-208ENST00000489537 TGIF2-C20orf24A0A0A6YYL0 155 aa4.94□□□□□ -1.62
SF3A3-208ENST00000489537 ZNF320A2RRD8 509 aa4.94□□□□□ -1.62
SF3A3-208ENST00000489537 IZUMO1RA6ND01 250 aa4.94□□□□□ -1.62
SF3A3-208ENST00000489537 C5orf52A6NGY3 159 aa4.94□□□□□ -1.62
SF3A3-208ENST00000489537 ZNF785A8K8V0 405 aa4.94□□□□□ -1.62
SF3A3-208ENST00000489537 UBE2CO00762 179 aa4.94□□□□□ -1.62
SF3A3-208ENST00000489537 LY6G6DO95868 133 aa4.94□□□□□ -1.62
SF3A3-208ENST00000489537 P01737 135 aa4.94□□□□□ -1.62
SF3A3-208ENST00000489537 PPIFP30405 207 aaKnown RBP4.94□□□□□ -1.62
SF3A3-208ENST00000489537 TPPP2P59282 170 aa4.94□□□□□ -1.62
SF3A3-208ENST00000489537 KRTAP1-1Q07627 177 aa4.94□□□□□ -1.62
SF3A3-208ENST00000489537 USF2Q15853 346 aaPredicted RBP4.94□□□□□ -1.62
SF3A3-208ENST00000489537 PSG3Q16557 428 aa4.94□□□□□ -1.62
SF3A3-208ENST00000489537 KLF17Q5JT82 389 aaPredicted RBP4.94□□□□□ -1.62
SF3A3-208ENST00000489537 TOMM20LQ6UXN7 152 aa4.94□□□□□ -1.62
SF3A3-208ENST00000489537 COX8CQ7Z4L0 72 aa4.94□□□□□ -1.62
SF3A3-208ENST00000489537 REC114Q7Z4M0 266 aa4.94□□□□□ -1.62
SF3A3-208ENST00000489537 TSKUQ8WUA8 353 aa4.94□□□□□ -1.62
SF3A3-208ENST00000489537 BORCS7Q96B45 105 aa4.94□□□□□ -1.62
SF3A3-208ENST00000489537 ZNF414Q96IQ9 312 aa4.94□□□□□ -1.62
SF3A3-208ENST00000489537 Q96MF0 132 aa4.94□□□□□ -1.62
SF3A3-208ENST00000489537 DERL1Q9BUN8 251 aa4.94□□□□□ -1.62
SF3A3-208ENST00000489537 UFC1Q9Y3C8 167 aa4.94□□□□□ -1.62
SF3A3-208ENST00000489537 LENEPQ9Y5L5 61 aa4.94□□□□□ -1.62
SF3A3-208ENST00000489537 TRAPPC1Q9Y5R8 145 aa4.94□□□□□ -1.62
SF3A3-208ENST00000489537 TRBV7-9A0A0J9YWB2 115 aa4.93□□□□□ -1.62
SF3A3-208ENST00000489537 SMIM27A0A1W2PRY6 76 aa4.93□□□□□ -1.62
SF3A3-208ENST00000489537 BUB3O43684 328 aa4.93□□□□□ -1.62
SF3A3-208ENST00000489537 IGHG4P01861 327 aa4.93□□□□□ -1.62
SF3A3-208ENST00000489537 TRGC2P03986 189 aa4.93□□□□□ -1.62
SF3A3-208ENST00000489537 AMY1AP04745 511 aa4.93□□□□□ -1.62
SF3A3-208ENST00000489537 CXCL1P09341 107 aa4.93□□□□□ -1.62
SF3A3-208ENST00000489537 SMIM6P0DI80 62 aa4.93□□□□□ -1.62
SF3A3-208ENST00000489537 PF4V1P10720 104 aa4.93□□□□□ -1.62
SF3A3-208ENST00000489537 ID1P41134 155 aa4.93□□□□□ -1.62
SF3A3-208ENST00000489537 CDX1P47902 265 aaPredicted RBP4.93□□□□□ -1.62
SF3A3-208ENST00000489537 SRSF2Q01130 221 aaKnown RBP4.93□□□□□ -1.62
SF3A3-208ENST00000489537 DEFB112Q30KQ8 113 aa4.93□□□□□ -1.62
SF3A3-208ENST00000489537 KRTAP21-3Q3LHN1 58 aa4.93□□□□□ -1.62
SF3A3-208ENST00000489537 COA6Q5JTJ3 125 aaKnown RBP4.93□□□□□ -1.62
SF3A3-208ENST00000489537 MORN5Q5VZ52 161 aa4.93□□□□□ -1.62
SF3A3-208ENST00000489537 CLEC19AQ6UXS0 136 aa4.93□□□□□ -1.62
SF3A3-208ENST00000489537 SIGLEC15Q6ZMC9 328 aa4.93□□□□□ -1.62
SF3A3-208ENST00000489537 TMEM219Q86XT9 240 aa4.93□□□□□ -1.62
SF3A3-208ENST00000489537 GPHB5Q86YW7 130 aa4.93□□□□□ -1.62
SF3A3-208ENST00000489537 MAPK1IP1LQ8NDC0 245 aa4.93□□□□□ -1.62
SF3A3-208ENST00000489537 WIPF2Q8TF74 440 aaPredicted RBP4.93□□□□□ -1.62
SF3A3-208ENST00000489537 RPP21Q9H633 154 aaKnown RBP4.93□□□□□ -1.62
SF3A3-208ENST00000489537 SERTAD4Q9NUC0 356 aa4.93□□□□□ -1.62
SF3A3-208ENST00000489537 TMEM160Q9NX00 188 aa4.93□□□□□ -1.62
SF3A3-208ENST00000489537 PPP1R14DQ9NXH3 145 aa4.93□□□□□ -1.62
SF3A3-208ENST00000489537 ZNF586Q9NXT0 402 aa4.93□□□□□ -1.62
SF3A3-208ENST00000489537 V9GYV3 84 aa4.93□□□□□ -1.62
SF3A3-208ENST00000489537 IGHV3OR16-10A0A075B7F0 116 aa4.92□□□□□ -1.62
SF3A3-208ENST00000489537 DIRC3C9JPN6 131 aa4.92□□□□□ -1.62
SF3A3-208ENST00000489537 G3V318 75 aa4.92□□□□□ -1.62
SF3A3-208ENST00000489537 M0QZ24 198 aa4.92□□□□□ -1.62
SF3A3-208ENST00000489537 MRPS12O15235 138 aaKnown RBP4.92□□□□□ -1.62
SF3A3-208ENST00000489537 EIF3GO75821 320 aaKnown RBP eCLIP4.92□□□□□ -1.62
SF3A3-208ENST00000489537 HOXA5P20719 270 aa4.92□□□□□ -1.62
SF3A3-208ENST00000489537 LY6EQ16553 131 aa4.92□□□□□ -1.62
SF3A3-208ENST00000489537 ACTL10Q5JWF8 245 aa4.92□□□□□ -1.62
SF3A3-208ENST00000489537 DNLZQ5SXM8 178 aa4.92□□□□□ -1.62
SF3A3-208ENST00000489537 GOLT1AQ6ZVE7 132 aa4.92□□□□□ -1.62
SF3A3-208ENST00000489537 Q86TA4 180 aa4.92□□□□□ -1.62
SF3A3-208ENST00000489537 GBGT1Q8N5D6 347 aa4.92□□□□□ -1.62
SF3A3-208ENST00000489537 PACRGQ96M98 296 aaPredicted RBP4.92□□□□□ -1.62
SF3A3-208ENST00000489537 CCDC140Q96MF4 163 aa4.92□□□□□ -1.62
SF3A3-208ENST00000489537 JMJD8Q96S16 334 aa4.92□□□□□ -1.62
SF3A3-208ENST00000489537 MLST8Q9BVC4 326 aa4.92□□□□□ -1.62
SF3A3-208ENST00000489537 DAZ1Q9NQZ3 744 aaKnown RBP4.92□□□□□ -1.62
SF3A3-208ENST00000489537 PEF1Q9UBV8 284 aaKnown RBP4.92□□□□□ -1.62
SF3A3-208ENST00000489537 PSG8Q9UQ74 426 aa4.92□□□□□ -1.62
SF3A3-208ENST00000489537 CR1P17927 2039 aa4.92□□□□□ -1.62
SF3A3-208ENST00000489537 K7EN84 100 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 LGALS9O00182 355 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 OVOL1O14753 267 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 SMAD7O15105 426 aaKnown RBP4.91□□□□□ -1.62
SF3A3-208ENST00000489537 HIST1H2BKO60814 126 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 IGLV2-8P01709 118 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 HIST1H2BJP06899 126 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 TRGC1P0CF51 173 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 HIST1H2BOP23527 126 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 HIST1H2BBP33778 126 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 AKR1D1P51857 326 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 FOXA3P55318 350 aaPredicted RBP4.91□□□□□ -1.62
SF3A3-208ENST00000489537 HIST1H2BDP58876 126 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 SNRPEP62304 92 aaKnown RBP4.91□□□□□ -1.62
SF3A3-208ENST00000489537 HIST1H2BCP62807 126 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 CFHR3Q02985 330 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 FABP9Q0Z7S8 132 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 RIGQ13278 110 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 HIST2H2BEQ16778 126 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.91□□□□□ -1.62
SF3A3-208ENST00000489537 TMEM78Q5T7P6 136 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 171.5 ms