RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 OR8A1Q8NGG7 326 aa11.74□□□□□ -0.53
HDAC7-224ENST00000488927 C1QTNF4Q9BXJ3 329 aa11.74□□□□□ -0.53
HDAC7-224ENST00000488927 CA1P00915 261 aaPredicted RBP11.73□□□□□ -0.53
HDAC7-224ENST00000488927 HLA-DMBP28068 263 aa11.73□□□□□ -0.53
HDAC7-224ENST00000488927 GCHFRP30047 84 aa11.73□□□□□ -0.53
HDAC7-224ENST00000488927 FAM74A1Q5RGS3 127 aa11.73□□□□□ -0.53
HDAC7-224ENST00000488927 GDF5OSQ5U4N7 250 aa11.73□□□□□ -0.53
HDAC7-224ENST00000488927 OR4B1Q8NGF8 309 aa11.73□□□□□ -0.53
HDAC7-224ENST00000488927 OR10J6PQ8NGY7 276 aa11.73□□□□□ -0.53
HDAC7-224ENST00000488927 TMED6Q8WW62 240 aa11.73□□□□□ -0.53
HDAC7-224ENST00000488927 PHYHIPLQ96FC7 376 aa11.73□□□□□ -0.53
HDAC7-224ENST00000488927 TP53TG1Q9Y2A0 90 aa11.73□□□□□ -0.53
HDAC7-224ENST00000488927 A8MTW9 85 aa11.72□□□□□ -0.53
HDAC7-224ENST00000488927 F6UB75 175 aa11.72□□□□□ -0.53
HDAC7-224ENST00000488927 EIF3GO75821 320 aaKnown RBP eCLIP11.72□□□□□ -0.53
HDAC7-224ENST00000488927 CSN1S1P47710 185 aa11.72□□□□□ -0.53
HDAC7-224ENST00000488927 CNN1P51911 297 aaKnown RBP11.72□□□□□ -0.53
HDAC7-224ENST00000488927 DEFB1P60022 68 aa11.72□□□□□ -0.53
HDAC7-224ENST00000488927 RANP62826 216 aaKnown RBP11.72□□□□□ -0.53
HDAC7-224ENST00000488927 ICAM4Q14773 271 aa11.72□□□□□ -0.53
HDAC7-224ENST00000488927 ZNF726P1Q15940 193 aa11.72□□□□□ -0.53
HDAC7-224ENST00000488927 EXOC3-AS1Q8N2X6 119 aa11.72□□□□□ -0.53
HDAC7-224ENST00000488927 SUN5Q8TC36 379 aa11.72□□□□□ -0.53
HDAC7-224ENST00000488927 Q9H3A6 140 aa11.72□□□□□ -0.53
HDAC7-224ENST00000488927 DNAH9Q9NYC9 4486 aa11.72□□□□□ -0.53
HDAC7-224ENST00000488927 MAP1LC3B2A6NCE7 125 aa11.71□□□□□ -0.53
HDAC7-224ENST00000488927 ZNF705FA8MVS1 300 aaPredicted RBP11.71□□□□□ -0.53
HDAC7-224ENST00000488927 HIST1H1AQ02539 215 aaPredicted RBP11.71□□□□□ -0.53
HDAC7-224ENST00000488927 RXFP4Q8TDU9 374 aa11.71□□□□□ -0.53
HDAC7-224ENST00000488927 RCHY1Q96PM5 261 aa11.71□□□□□ -0.53
HDAC7-224ENST00000488927 MAP1LC3BQ9GZQ8 125 aa11.71□□□□□ -0.53
HDAC7-224ENST00000488927 OTORQ9NRC9 128 aa11.71□□□□□ -0.53
HDAC7-224ENST00000488927 IGKV3-20P01619 116 aa11.7□□□□□ -0.54
HDAC7-224ENST00000488927 AMBPP02760 352 aa11.7□□□□□ -0.54
HDAC7-224ENST00000488927 NKX2-5P52952 324 aaPredicted RBP11.7□□□□□ -0.54
HDAC7-224ENST00000488927 SSX7Q7RTT5 188 aa11.7□□□□□ -0.54
HDAC7-224ENST00000488927 IQCF2Q8IXL9 164 aa11.7□□□□□ -0.54
HDAC7-224ENST00000488927 ARL6IP6Q8N6S5 226 aa11.7□□□□□ -0.54
HDAC7-224ENST00000488927 FAM213BQ8TBF2 198 aa11.7□□□□□ -0.54
HDAC7-224ENST00000488927 RNF183Q96D59 192 aa11.7□□□□□ -0.54
HDAC7-224ENST00000488927 PPP1R14DQ9NXH3 145 aa11.7□□□□□ -0.54
HDAC7-224ENST00000488927 U3KQK5 164 aa11.7□□□□□ -0.54
HDAC7-224ENST00000488927 M0R3E3 92 aa11.69□□□□□ -0.54
HDAC7-224ENST00000488927 SPRY2O43597 315 aa11.69□□□□□ -0.54
HDAC7-224ENST00000488927 DEFB135Q30KP9 77 aa11.69□□□□□ -0.54
HDAC7-224ENST00000488927 CMTM2Q8TAZ6 248 aa11.69□□□□□ -0.54
HDAC7-224ENST00000488927 MBD3L1Q8WWY6 194 aa11.69□□□□□ -0.54
HDAC7-224ENST00000488927 PLA2G2EQ9NZK7 142 aa11.69□□□□□ -0.54
HDAC7-224ENST00000488927 A0A1W2PRE2 83 aa11.68□□□□□ -0.54
HDAC7-224ENST00000488927 PGPA6NDG6 321 aa11.68□□□□□ -0.54
HDAC7-224ENST00000488927 PRAC2D3DTV9 90 aa11.68□□□□□ -0.54
HDAC7-224ENST00000488927 H2AFB1P0C5Y9 115 aa11.68□□□□□ -0.54
HDAC7-224ENST00000488927 ZNF705DP0CH99 300 aaPredicted RBP11.68□□□□□ -0.54
HDAC7-224ENST00000488927 ZNF705BP0CI00 300 aaPredicted RBP11.68□□□□□ -0.54
HDAC7-224ENST00000488927 FHITP49789 147 aa11.68□□□□□ -0.54
HDAC7-224ENST00000488927 SULT1A2P50226 295 aa11.68□□□□□ -0.54
HDAC7-224ENST00000488927 SFT2D1Q8WV19 159 aa11.68□□□□□ -0.54
HDAC7-224ENST00000488927 OVOL2Q9BRP0 275 aa11.68□□□□□ -0.54
HDAC7-224ENST00000488927 NKX6-2Q9C056 277 aaPredicted RBP11.68□□□□□ -0.54
HDAC7-224ENST00000488927 RBAKDNA6NC62 111 aa11.67□□□□□ -0.54
HDAC7-224ENST00000488927 NPIPB6E9PJ23 425 aa11.67□□□□□ -0.54
HDAC7-224ENST00000488927 TEX46H3BTG2 121 aa11.67□□□□□ -0.54
HDAC7-224ENST00000488927 GIG44P09565 113 aaPredicted RBP11.67□□□□□ -0.54
HDAC7-224ENST00000488927 TSPOP30536 169 aa11.67□□□□□ -0.54
HDAC7-224ENST00000488927 FGF8P55075 233 aaPredicted RBP11.67□□□□□ -0.54
HDAC7-224ENST00000488927 AMTNQ6UX39 209 aa11.67□□□□□ -0.54
HDAC7-224ENST00000488927 LINC00477Q96M19 166 aa11.67□□□□□ -0.54
HDAC7-224ENST00000488927 ODF3Q96PU9 254 aa11.67□□□□□ -0.54
HDAC7-224ENST00000488927 SERTM2A0A1B0GWG4 89 aa11.66□□□□□ -0.54
HDAC7-224ENST00000488927 BOLA2-SMG1P6H3BVE0 249 aa11.66□□□□□ -0.54
HDAC7-224ENST00000488927 SLC25A5P05141 298 aaKnown RBP11.66□□□□□ -0.54
HDAC7-224ENST00000488927 PPT1P50897 306 aa11.66□□□□□ -0.54
HDAC7-224ENST00000488927 TMEM78Q5T7P6 136 aa11.66□□□□□ -0.54
HDAC7-224ENST00000488927 C9orf47Q6ZRZ4 202 aa11.66□□□□□ -0.54
HDAC7-224ENST00000488927 SLC35B3Q9H1N7 401 aa11.66□□□□□ -0.54
HDAC7-224ENST00000488927 XCL2Q9UBD3 114 aa11.66□□□□□ -0.54
HDAC7-224ENST00000488927 ARL2-SNX15V9GYD0 113 aa11.66□□□□□ -0.54
HDAC7-224ENST00000488927 DIRC3C9JPN6 131 aa11.65□□□□□ -0.54
HDAC7-224ENST00000488927 CDKN1BP46527 198 aa11.65□□□□□ -0.54
HDAC7-224ENST00000488927 C5orf17Q8NAS9 161 aa11.65□□□□□ -0.54
HDAC7-224ENST00000488927 CSNK1G2-AS1Q8NCQ2 148 aa11.65□□□□□ -0.54
HDAC7-224ENST00000488927 TMPRSS5Q9H3S3 457 aa11.65□□□□□ -0.54
HDAC7-224ENST00000488927 RETNQ9HD89 108 aa11.65□□□□□ -0.54
HDAC7-224ENST00000488927 AGRNO00468 2067 aa11.64□□□□□ -0.55
HDAC7-224ENST00000488927 TRAV1-1A0A0B4J248 108 aa11.64□□□□□ -0.55
HDAC7-224ENST00000488927 K7EQM0 130 aa11.64□□□□□ -0.55
HDAC7-224ENST00000488927 INSP01308 110 aa11.64□□□□□ -0.55
HDAC7-224ENST00000488927 HBE1P02100 147 aa11.64□□□□□ -0.55
HDAC7-224ENST00000488927 LEPP41159 167 aa11.64□□□□□ -0.55
HDAC7-224ENST00000488927 IGF2BP2-AS1Q96M15 143 aa11.64□□□□□ -0.55
HDAC7-224ENST00000488927 RARRES2Q99969 163 aa11.64□□□□□ -0.55
HDAC7-224ENST00000488927 GOLT1BQ9Y3E0 138 aa11.64□□□□□ -0.55
HDAC7-224ENST00000488927 HUWE1Q7Z6Z7 4374 aaKnown RBP11.63□□□□□ -0.55
HDAC7-224ENST00000488927 TGP01266 2768 aa11.63□□□□□ -0.55
HDAC7-224ENST00000488927 IGKV2-40A0A087WW87 121 aaPredicted RBP11.63□□□□□ -0.55
HDAC7-224ENST00000488927 TRBV7-9A0A0J9YWB2 115 aa11.63□□□□□ -0.55
HDAC7-224ENST00000488927 IGKV2D-40P01614 121 aaPredicted RBP11.63□□□□□ -0.55
HDAC7-224ENST00000488927 FXYD7P58549 80 aa11.63□□□□□ -0.55
HDAC7-224ENST00000488927 SUMO1P63165 101 aaKnown RBP11.63□□□□□ -0.55
HDAC7-224ENST00000488927 SPINK13Q1W4C9 94 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms