RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 STAG3L3P0CL85 134 aa11.58□□□□□ -0.56
C9orf3-219ENST00000488186 ARL14EPLP0DKL9 152 aa11.58□□□□□ -0.56
C9orf3-219ENST00000488186 HIST1H1AQ02539 215 aaPredicted RBP11.58□□□□□ -0.56
C9orf3-219ENST00000488186 ICAM4Q14773 271 aa11.58□□□□□ -0.56
C9orf3-219ENST00000488186 GDF5OSQ5U4N7 250 aa11.58□□□□□ -0.56
C9orf3-219ENST00000488186 C9orf62Q8N4C0 152 aa11.58□□□□□ -0.56
C9orf3-219ENST00000488186 OR10J6PQ8NGY7 276 aa11.58□□□□□ -0.56
C9orf3-219ENST00000488186 STOML3Q8TAV4 291 aa11.58□□□□□ -0.56
C9orf3-219ENST00000488186 TMED6Q8WW62 240 aa11.58□□□□□ -0.56
C9orf3-219ENST00000488186 ZNF503Q96F45 646 aa11.58□□□□□ -0.56
C9orf3-219ENST00000488186 NDUFB4O95168 129 aa11.57□□□□□ -0.56
C9orf3-219ENST00000488186 ZNF705DP0CH99 300 aaPredicted RBP11.57□□□□□ -0.56
C9orf3-219ENST00000488186 ZNF705BP0CI00 300 aaPredicted RBP11.57□□□□□ -0.56
C9orf3-219ENST00000488186 CSN1S1P47710 185 aa11.57□□□□□ -0.56
C9orf3-219ENST00000488186 FAM74A1Q5RGS3 127 aa11.57□□□□□ -0.56
C9orf3-219ENST00000488186 Q6ZWC4 215 aa11.57□□□□□ -0.56
C9orf3-219ENST00000488186 LYPD1Q8N2G4 141 aa11.57□□□□□ -0.56
C9orf3-219ENST00000488186 EXOC3-AS1Q8N2X6 119 aa11.57□□□□□ -0.56
C9orf3-219ENST00000488186 TM2D3Q9BRN9 247 aa11.57□□□□□ -0.56
C9orf3-219ENST00000488186 TMEM167BQ9NRX6 74 aa11.57□□□□□ -0.56
C9orf3-219ENST00000488186 GCHFRP30047 84 aa11.56□□□□□ -0.56
C9orf3-219ENST00000488186 CNN1P51911 297 aaKnown RBP11.56□□□□□ -0.56
C9orf3-219ENST00000488186 NKX2-5P52952 324 aaPredicted RBP11.56□□□□□ -0.56
C9orf3-219ENST00000488186 DEFB135Q30KP9 77 aa11.56□□□□□ -0.56
C9orf3-219ENST00000488186 OR8A1Q8NGG7 326 aa11.56□□□□□ -0.56
C9orf3-219ENST00000488186 FAM213BQ8TBF2 198 aa11.56□□□□□ -0.56
C9orf3-219ENST00000488186 MRPL53Q96EL3 112 aaKnown RBP11.56□□□□□ -0.56
C9orf3-219ENST00000488186 PHYHIPLQ96FC7 376 aa11.56□□□□□ -0.56
C9orf3-219ENST00000488186 RCHY1Q96PM5 261 aa11.56□□□□□ -0.56
C9orf3-219ENST00000488186 C1QTNF4Q9BXJ3 329 aa11.56□□□□□ -0.56
C9orf3-219ENST00000488186 STAB2Q8WWQ8 2551 aa11.56□□□□□ -0.56
C9orf3-219ENST00000488186 SPRY2O43597 315 aa11.55□□□□□ -0.56
C9orf3-219ENST00000488186 PRB4P10163 310 aaPredicted RBP11.55□□□□□ -0.56
C9orf3-219ENST00000488186 DPPA3Q6W0C5 159 aa11.55□□□□□ -0.56
C9orf3-219ENST00000488186 CMTM2Q8TAZ6 248 aa11.55□□□□□ -0.56
C9orf3-219ENST00000488186 Q9H3A6 140 aa11.55□□□□□ -0.56
C9orf3-219ENST00000488186 RETNQ9HD89 108 aa11.55□□□□□ -0.56
C9orf3-219ENST00000488186 U3KQK5 164 aa11.55□□□□□ -0.56
C9orf3-219ENST00000488186 MAP1LC3B2A6NCE7 125 aa11.54□□□□□ -0.56
C9orf3-219ENST00000488186 PGPA6NDG6 321 aa11.54□□□□□ -0.56
C9orf3-219ENST00000488186 M0R3E3 92 aa11.54□□□□□ -0.56
C9orf3-219ENST00000488186 FXYD7P58549 80 aa11.54□□□□□ -0.56
C9orf3-219ENST00000488186 RXFP4Q8TDU9 374 aa11.54□□□□□ -0.56
C9orf3-219ENST00000488186 CLUHP3Q96NS8 147 aa11.54□□□□□ -0.56
C9orf3-219ENST00000488186 MAP1LC3BQ9GZQ8 125 aa11.54□□□□□ -0.56
C9orf3-219ENST00000488186 OTORQ9NRC9 128 aa11.54□□□□□ -0.56
C9orf3-219ENST00000488186 XCL2Q9UBD3 114 aa11.54□□□□□ -0.56
C9orf3-219ENST00000488186 AGRNO00468 2067 aa11.53□□□□□ -0.56
C9orf3-219ENST00000488186 PRAC2D3DTV9 90 aa11.53□□□□□ -0.56
C9orf3-219ENST00000488186 FHITP49789 147 aa11.53□□□□□ -0.56
C9orf3-219ENST00000488186 RAB5CP51148 216 aa11.53□□□□□ -0.56
C9orf3-219ENST00000488186 FGF8P55075 233 aaPredicted RBP11.53□□□□□ -0.56
C9orf3-219ENST00000488186 ZNF726P1Q15940 193 aa11.53□□□□□ -0.56
C9orf3-219ENST00000488186 SSX7Q7RTT5 188 aa11.53□□□□□ -0.56
C9orf3-219ENST00000488186 SFT2D1Q8WV19 159 aa11.53□□□□□ -0.56
C9orf3-219ENST00000488186 RNF183Q96D59 192 aa11.53□□□□□ -0.56
C9orf3-219ENST00000488186 SLC35B3Q9H1N7 401 aa11.53□□□□□ -0.56
C9orf3-219ENST00000488186 TP53TG1Q9Y2A0 90 aa11.53□□□□□ -0.56
C9orf3-219ENST00000488186 HUWE1Q7Z6Z7 4374 aaKnown RBP11.53□□□□□ -0.56
C9orf3-219ENST00000488186 NBEAL2Q6ZNJ1 2754 aa11.52□□□□□ -0.56
C9orf3-219ENST00000488186 AMBPP02760 352 aa11.52□□□□□ -0.57
C9orf3-219ENST00000488186 H2AFB1P0C5Y9 115 aa11.52□□□□□ -0.57
C9orf3-219ENST00000488186 OVOL2Q9BRP0 275 aa11.52□□□□□ -0.57
C9orf3-219ENST00000488186 RPH3ALQ9UNE2 315 aa11.52□□□□□ -0.57
C9orf3-219ENST00000488186 TEX46H3BTG2 121 aa11.51□□□□□ -0.57
C9orf3-219ENST00000488186 TMEM78Q5T7P6 136 aa11.51□□□□□ -0.57
C9orf3-219ENST00000488186 RARRES2Q99969 163 aa11.51□□□□□ -0.57
C9orf3-219ENST00000488186 PLA2G2EQ9NZK7 142 aa11.51□□□□□ -0.57
C9orf3-219ENST00000488186 A0A1B0GV50 99 aa11.5□□□□□ -0.57
C9orf3-219ENST00000488186 BOLA2-SMG1P6H3BVE0 249 aa11.5□□□□□ -0.57
C9orf3-219ENST00000488186 SLC25A5P05141 298 aaKnown RBP11.5□□□□□ -0.57
C9orf3-219ENST00000488186 TSPOP30536 169 aa11.5□□□□□ -0.57
C9orf3-219ENST00000488186 UBE2G2P60604 165 aa11.5□□□□□ -0.57
C9orf3-219ENST00000488186 SPINK13Q1W4C9 94 aa11.5□□□□□ -0.57
C9orf3-219ENST00000488186 OR11H2Q8NH07 326 aa11.5□□□□□ -0.57
C9orf3-219ENST00000488186 SUN5Q8TC36 379 aa11.5□□□□□ -0.57
C9orf3-219ENST00000488186 MBD3L1Q8WWY6 194 aa11.5□□□□□ -0.57
C9orf3-219ENST00000488186 LINC00477Q96M19 166 aa11.5□□□□□ -0.57
C9orf3-219ENST00000488186 TMPRSS5Q9H3S3 457 aa11.5□□□□□ -0.57
C9orf3-219ENST00000488186 BOLA1Q9Y3E2 137 aa11.5□□□□□ -0.57
C9orf3-219ENST00000488186 TENM3Q9P273 2699 aa11.49□□□□□ -0.57
C9orf3-219ENST00000488186 IGKV2-40A0A087WW87 121 aaPredicted RBP11.49□□□□□ -0.57
C9orf3-219ENST00000488186 A8MTW9 85 aa11.49□□□□□ -0.57
C9orf3-219ENST00000488186 M0R2Z0 102 aa11.49□□□□□ -0.57
C9orf3-219ENST00000488186 IGKV2D-40P01614 121 aaPredicted RBP11.49□□□□□ -0.57
C9orf3-219ENST00000488186 GIG44P09565 113 aaPredicted RBP11.49□□□□□ -0.57
C9orf3-219ENST00000488186 LEPP41159 167 aa11.49□□□□□ -0.57
C9orf3-219ENST00000488186 SULT1A2P50226 295 aa11.49□□□□□ -0.57
C9orf3-219ENST00000488186 SUMO1P63165 101 aaKnown RBP11.49□□□□□ -0.57
C9orf3-219ENST00000488186 ERCC8Q13216 396 aa11.49□□□□□ -0.57
C9orf3-219ENST00000488186 TMEM208Q9BTX3 173 aa11.49□□□□□ -0.57
C9orf3-219ENST00000488186 GOLT1BQ9Y3E0 138 aa11.49□□□□□ -0.57
C9orf3-219ENST00000488186 IGHV3OR16-12A0A075B7B8 117 aa11.48□□□□□ -0.57
C9orf3-219ENST00000488186 A0A1W2PRE2 83 aa11.48□□□□□ -0.57
C9orf3-219ENST00000488186 DIRC3C9JPN6 131 aa11.48□□□□□ -0.57
C9orf3-219ENST00000488186 NPIPB6E9PJ23 425 aa11.48□□□□□ -0.57
C9orf3-219ENST00000488186 K7EQM0 130 aa11.48□□□□□ -0.57
C9orf3-219ENST00000488186 IFNA7P01567 189 aa11.48□□□□□ -0.57
C9orf3-219ENST00000488186 CDKN1BP46527 198 aa11.48□□□□□ -0.57
C9orf3-219ENST00000488186 AMTNQ6UX39 209 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms