RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 CA1P00915 261 aaPredicted RBP4.11□□□□□ -1.75
CUX1-208ENST00000485792 RLN2P04090 185 aa4.11□□□□□ -1.75
CUX1-208ENST00000485792 PRM2P04554 102 aa4.11□□□□□ -1.75
CUX1-208ENST00000485792 MIFP14174 115 aa4.11□□□□□ -1.75
CUX1-208ENST00000485792 ID1P41134 155 aa4.11□□□□□ -1.75
CUX1-208ENST00000485792 S100A10P60903 97 aa4.11□□□□□ -1.75
CUX1-208ENST00000485792 RAP2BP61225 183 aa4.11□□□□□ -1.75
CUX1-208ENST00000485792 B2MP61769 119 aa4.11□□□□□ -1.75
CUX1-208ENST00000485792 RAB31Q13636 194 aa4.11□□□□□ -1.75
CUX1-208ENST00000485792 ICAM4Q14773 271 aa4.11□□□□□ -1.75
CUX1-208ENST00000485792 FCN2Q15485 313 aa4.11□□□□□ -1.75
CUX1-208ENST00000485792 PSG3Q16557 428 aa4.11□□□□□ -1.75
CUX1-208ENST00000485792 ZFAND6Q6FIF0 208 aa4.11□□□□□ -1.75
CUX1-208ENST00000485792 S100A7AQ86SG5 101 aa4.11□□□□□ -1.75
CUX1-208ENST00000485792 BPIFA4PQ86YQ2 179 aa4.11□□□□□ -1.75
CUX1-208ENST00000485792 C1orf158Q8N1D5 194 aa4.11□□□□□ -1.75
CUX1-208ENST00000485792 RNF182Q8N6D2 247 aa4.11□□□□□ -1.75
CUX1-208ENST00000485792 OR11H2Q8NH07 326 aa4.11□□□□□ -1.75
CUX1-208ENST00000485792 ZNF503Q96F45 646 aa4.11□□□□□ -1.75
CUX1-208ENST00000485792 AQP10Q96PS8 301 aa4.11□□□□□ -1.75
CUX1-208ENST00000485792 RARRES2Q99969 163 aa4.11□□□□□ -1.75
CUX1-208ENST00000485792 C1QTNF4Q9BXJ3 329 aa4.11□□□□□ -1.75
CUX1-208ENST00000485792 RPRMQ9NS64 109 aa4.11□□□□□ -1.75
CUX1-208ENST00000485792 CLEC5AQ9NY25 188 aa4.11□□□□□ -1.75
CUX1-208ENST00000485792 CELA1Q9UNI1 258 aa4.11□□□□□ -1.75
CUX1-208ENST00000485792 HERC2O95714 4834 aa4.11□□□□□ -1.75
CUX1-208ENST00000485792 DNAH5Q8TE73 4624 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 TRAV5A0A0B4J249 113 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 LCE6AA0A183 80 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 PLAC8L1A1L4L8 177 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 SMCO3A2RU48 225 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 SMIM9A6NGZ8 99 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 PRAC2D3DTV9 90 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 H3BTX0 84 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 DEFB4AO15263 64 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 SSNA1O43805 119 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 GIPP09681 153 aaPredicted RBP4.1□□□□□ -1.75
CUX1-208ENST00000485792 PET100P0DJ07 73 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 RPL12P30050 165 aaKnown RBP4.1□□□□□ -1.75
CUX1-208ENST00000485792 BCAP31P51572 246 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 NUTF2P61970 127 aaKnown RBP4.1□□□□□ -1.75
CUX1-208ENST00000485792 PDE6HQ13956 83 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 GUK1Q16774 197 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 FAM78BQ5VT40 261 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 C10orf113Q5VZT2 155 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 LCN15Q6UWW0 184 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 Q6ZQT7 251 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 Q6ZRG5 221 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 OR8A1Q8NGG7 326 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 OR1L4Q8NGR5 311 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 SUN5Q8TC36 379 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 MRPL53Q96EL3 112 aaKnown RBP4.1□□□□□ -1.75
CUX1-208ENST00000485792 FAM19A4Q96LR4 140 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 PFDN5Q99471 154 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 SLC50A1Q9BRV3 221 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 SLC25A22Q9H936 323 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 ZNF586Q9NXT0 402 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 MBD2Q9UBB5 411 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 PXMP4Q9Y6I8 212 aa4.1□□□□□ -1.75
CUX1-208ENST00000485792 TRBV19A0A075B6N1 114 aa4.09□□□□□ -1.75
CUX1-208ENST00000485792 UBE2L5PA0A1B0GUS4 154 aa4.09□□□□□ -1.75
CUX1-208ENST00000485792 RNF222A6NCQ9 220 aa4.09□□□□□ -1.75
CUX1-208ENST00000485792 HIST1H1EP10412 219 aaKnown RBP4.09□□□□□ -1.75
CUX1-208ENST00000485792 FGF7P21781 194 aa4.09□□□□□ -1.75
CUX1-208ENST00000485792 CNN1P51911 297 aaKnown RBP4.09□□□□□ -1.75
CUX1-208ENST00000485792 PSG9Q00887 426 aa4.09□□□□□ -1.75
CUX1-208ENST00000485792 RGS21Q2M5E4 152 aa4.09□□□□□ -1.75
CUX1-208ENST00000485792 LRRC37A5PQ49AS3 106 aa4.09□□□□□ -1.75
CUX1-208ENST00000485792 SSX7Q7RTT5 188 aa4.09□□□□□ -1.75
CUX1-208ENST00000485792 OR2G3Q8NGZ4 309 aa4.09□□□□□ -1.75
CUX1-208ENST00000485792 THAP6Q8TBB0 222 aa4.09□□□□□ -1.75
CUX1-208ENST00000485792 PPP1R14BQ96C90 147 aa4.09□□□□□ -1.75
CUX1-208ENST00000485792 FXYD5Q96DB9 178 aa4.09□□□□□ -1.75
CUX1-208ENST00000485792 ODF3Q96PU9 254 aa4.09□□□□□ -1.75
CUX1-208ENST00000485792 ATP5SQ99766 215 aa4.09□□□□□ -1.75
CUX1-208ENST00000485792 SLC25A2Q9BXI2 301 aa4.09□□□□□ -1.75
CUX1-208ENST00000485792 SLC35B3Q9H1N7 401 aa4.09□□□□□ -1.75
CUX1-208ENST00000485792 PPP1R14DQ9NXH3 145 aa4.09□□□□□ -1.75
CUX1-208ENST00000485792 XCL2Q9UBD3 114 aa4.09□□□□□ -1.75
CUX1-208ENST00000485792 TIMM9Q9Y5J7 89 aa4.09□□□□□ -1.75
CUX1-208ENST00000485792 IGHV4-28A0A0C4DH34 117 aa4.08□□□□□ -1.76
CUX1-208ENST00000485792 COX7A2P2O60397 106 aa4.08□□□□□ -1.76
CUX1-208ENST00000485792 DUSP14O95147 198 aaKnown RBP4.08□□□□□ -1.76
CUX1-208ENST00000485792 AMBPP02760 352 aa4.08□□□□□ -1.76
CUX1-208ENST00000485792 NMBP08949 121 aa4.08□□□□□ -1.76
CUX1-208ENST00000485792 TSPOP30536 169 aa4.08□□□□□ -1.76
CUX1-208ENST00000485792 FXYD7P58549 80 aa4.08□□□□□ -1.76
CUX1-208ENST00000485792 FGL1Q08830 312 aa4.08□□□□□ -1.76
CUX1-208ENST00000485792 CLINT1Q14677 625 aa4.08□□□□□ -1.76
CUX1-208ENST00000485792 PRR9Q5T870 116 aa4.08□□□□□ -1.76
CUX1-208ENST00000485792 EBLN2Q6P2I7 272 aa4.08□□□□□ -1.76
CUX1-208ENST00000485792 CEMP1Q6PRD7 247 aaPredicted RBP4.08□□□□□ -1.76
CUX1-208ENST00000485792 C9orf47Q6ZRZ4 202 aa4.08□□□□□ -1.76
CUX1-208ENST00000485792 Q6ZSN1 163 aa4.08□□□□□ -1.76
CUX1-208ENST00000485792 LYPD1Q8N2G4 141 aa4.08□□□□□ -1.76
CUX1-208ENST00000485792 ARL6IP6Q8N6S5 226 aa4.08□□□□□ -1.76
CUX1-208ENST00000485792 IGF2BP2-AS1Q96M15 143 aa4.08□□□□□ -1.76
CUX1-208ENST00000485792 LINC00052Q96N35 136 aa4.08□□□□□ -1.76
CUX1-208ENST00000485792 C8orf49Q96NF6 230 aa4.08□□□□□ -1.76
CUX1-208ENST00000485792 PSMG3Q9BT73 122 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms